RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W RKR1Q04781 1562 aa6.29□□□□□ -1.4
CDC4YFL009W MLP2P40457 1679 aa6.29□□□□□ -1.4
CDC4YFL009W SLI15P38283 698 aa6.29□□□□□ -1.4
CDC4YFL009W GEA1P47102 1408 aaPredicted RBP6.29□□□□□ -1.4
CDC4YFL009W YLR419WQ06698 1435 aaKnown RBP6.29□□□□□ -1.4
CDC4YFL009W HGH1P48362 394 aaKnown RBP6.28□□□□□ -1.4
CDC4YFL009W BIM1P40013 344 aa6.28□□□□□ -1.4
CDC4YFL009W ATG32P40458 529 aa6.28□□□□□ -1.4
CDC4YFL009W YFR016CP43597 1233 aaKnown RBP6.28□□□□□ -1.4
CDC4YFL009W TEA1P47988 759 aa6.28□□□□□ -1.4
CDC4YFL009W NIS1P53939 407 aa6.28□□□□□ -1.4
CDC4YFL009W SWR1Q05471 1514 aa6.27□□□□□ -1.41
CDC4YFL009W SSA2P10592 639 aaKnown RBP6.27□□□□□ -1.41
CDC4YFL009W RPS0BP46654 252 aaKnown RBP6.27□□□□□ -1.41
CDC4YFL009W HTA1P04911 132 aaKnown RBP6.26□□□□□ -1.41
CDC4YFL009W HTA2P04912 132 aa6.26□□□□□ -1.41
CDC4YFL009W BRL1P38770 471 aa6.26□□□□□ -1.41
CDC4YFL009W EAF7P53911 425 aaKnown RBP6.26□□□□□ -1.41
CDC4YFL009W OPY1P38271 328 aa6.26□□□□□ -1.41
CDC4YFL009W YCF1P39109 1515 aaKnown RBP6.25□□□□□ -1.41
CDC4YFL009W SIS1P25294 352 aaKnown RBP6.25□□□□□ -1.41
CDC4YFL009W GTT3P39996 337 aa6.25□□□□□ -1.41
CDC4YFL009W DAN4P47179 1161 aa6.25□□□□□ -1.41
CDC4YFL009W TOP2P06786 1428 aaKnown RBP6.25□□□□□ -1.41
CDC4YFL009W IRC20Q06554 1556 aa6.24□□□□□ -1.41
CDC4YFL009W RPC31P17890 251 aa6.24□□□□□ -1.41
CDC4YFL009W YEL023CP39992 682 aa6.24□□□□□ -1.41
CDC4YFL009W SUB2Q07478 446 aaKnown RBP6.24□□□□□ -1.41
CDC4YFL009W ERG12P07277 443 aa6.24□□□□□ -1.41
CDC4YFL009W BIO2P32451 375 aa6.24□□□□□ -1.41
CDC4YFL009W YJL007CP47080 104 aa6.24□□□□□ -1.41
CDC4YFL009W FPK1P53739 893 aa6.24□□□□□ -1.41
CDC4YFL009W CDC73Q06697 393 aa6.24□□□□□ -1.41
CDC4YFL009W MSB4Q12317 492 aa6.24□□□□□ -1.41
CDC4YFL009W PDR15Q04182 1529 aaKnown RBP6.23□□□□□ -1.41
CDC4YFL009W FUN12P39730 1002 aaKnown RBP6.22□□□□□ -1.41
CDC4YFL009W HST2P53686 357 aa6.22□□□□□ -1.41
CDC4YFL009W KOG1P38873 1557 aa6.22□□□□□ -1.41
CDC4YFL009W SCJ1P25303 377 aa6.22□□□□□ -1.41
CDC4YFL009W SNF7P39929 240 aaKnown RBP6.21□□□□□ -1.41
CDC4YFL009W TIF1P10081 395 aaKnown RBP6.2□□□□□ -1.42
CDC4YFL009W SIT4P20604 311 aa6.2□□□□□ -1.42
CDC4YFL009W YPR109WQ06104 294 aa6.2□□□□□ -1.42
CDC4YFL009W CLB5P30283 435 aa6.19□□□□□ -1.42
CDC4YFL009W ORC1P54784 914 aaPredicted RBP6.19□□□□□ -1.42
CDC4YFL009W CSC1Q06538 782 aa6.19□□□□□ -1.42
CDC4YFL009W ESS1P22696 170 aa6.19□□□□□ -1.42
CDC4YFL009W YJU3P28321 313 aa6.19□□□□□ -1.42
CDC4YFL009W ATG2P53855 1592 aa6.18□□□□□ -1.42
CDC4YFL009W TRP5P00931 707 aaKnown RBP6.18□□□□□ -1.42
CDC4YFL009W FPR3P38911 411 aaKnown RBP6.18□□□□□ -1.42
CDC4YFL009W MHP1P43638 1398 aa6.18□□□□□ -1.42
CDC4YFL009W PTC4P38089 393 aa6.17□□□□□ -1.42
CDC4YFL009W RIX1P38883 763 aaPredicted RBP6.17□□□□□ -1.42
CDC4YFL009W YIR014WP40570 242 aa6.17□□□□□ -1.42
CDC4YFL009W RAD59Q12223 238 aa6.17□□□□□ -1.42
CDC4YFL009W VPS15P22219 1454 aa6.17□□□□□ -1.42
CDC4YFL009W RSC30P38781 883 aa6.17□□□□□ -1.42
CDC4YFL009W YGR130CP53278 816 aa6.16□□□□□ -1.42
CDC4YFL009W WSC3Q12215 556 aa6.16□□□□□ -1.42
CDC4YFL009W RPO31P04051 1460 aa6.16□□□□□ -1.42
CDC4YFL009W NOP8Q08287 484 aaPredicted RBP6.16□□□□□ -1.42
CDC4YFL009W AIM44Q99299 758 aa6.16□□□□□ -1.42
CDC4YFL009W MMP1Q12372 583 aa6.15□□□□□ -1.42
CDC4YFL009W TY3B-GQ99315 1547 aa6.15□□□□□ -1.42
CDC4YFL009W NUP159P40477 1460 aa6.15□□□□□ -1.43
CDC4YFL009W SSA1P10591 642 aaKnown RBP6.15□□□□□ -1.43
CDC4YFL009W MID1P41821 548 aa6.15□□□□□ -1.43
CDC4YFL009W TFB4Q12004 338 aa6.15□□□□□ -1.43
CDC4YFL009W PKH3Q03306 898 aaPredicted RBP6.14□□□□□ -1.43
CDC4YFL009W YBL029C-AQ3E756 94 aa6.14□□□□□ -1.43
CDC4YFL009W ULS1Q08562 1619 aa6.14□□□□□ -1.43
CDC4YFL009W MMS1Q06211 1407 aa6.14□□□□□ -1.43
CDC4YFL009W SUP45P12385 437 aaKnown RBP6.14□□□□□ -1.43
CDC4YFL009W GEF1P37020 779 aa6.14□□□□□ -1.43
CDC4YFL009W YML020WQ03722 664 aa6.14□□□□□ -1.43
CDC4YFL009W YBL036CP38197 257 aa6.13□□□□□ -1.43
CDC4YFL009W PAF1P38351 445 aa6.13□□□□□ -1.43
CDC4YFL009W VNX1P42839 908 aa6.13□□□□□ -1.43
CDC4YFL009W TUM1Q08686 304 aaKnown RBP6.13□□□□□ -1.43
CDC4YFL009W DNF1P32660 1571 aa6.13□□□□□ -1.43
CDC4YFL009W ROX1P25042 368 aa6.13□□□□□ -1.43
CDC4YFL009W TTI1P36097 1038 aa6.13□□□□□ -1.43
CDC4YFL009W YNL108CP53929 270 aa6.13□□□□□ -1.43
CDC4YFL009W NOB1Q08444 459 aaKnown RBP6.13□□□□□ -1.43
CDC4YFL009W IOC2Q12072 812 aa6.13□□□□□ -1.43
CDC4YFL009W CPS1P27614 576 aa6.12□□□□□ -1.43
CDC4YFL009W NOP7P53261 605 aaKnown RBP6.11□□□□□ -1.43
CDC4YFL009W MPC54Q08550 464 aa6.11□□□□□ -1.43
CDC4YFL009W YDJ1P25491 409 aaKnown RBP6.11□□□□□ -1.43
CDC4YFL009W NUG1P40010 520 aaKnown RBP6.11□□□□□ -1.43
CDC4YFL009W YMR196WQ04336 1088 aa6.11□□□□□ -1.43
CDC4YFL009W EAP1P36041 632 aaKnown RBP6.1□□□□□ -1.43
CDC4YFL009W RTG2P32608 588 aaKnown RBP6.1□□□□□ -1.43
CDC4YFL009W CSE4P36012 229 aa6.1□□□□□ -1.43
CDC4YFL009W JIP4Q03361 876 aa6.1□□□□□ -1.43
CDC4YFL009W PDS5Q04264 1277 aa6.09□□□□□ -1.43
CDC4YFL009W MRX10Q05648 414 aa6.09□□□□□ -1.43
CDC4YFL009W YPR204WQ08995 1032 aa6.09□□□□□ -1.43
CDC4YFL009W TY1B-DR3Q99231 1755 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 46.1 ms