RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN3YER021W TY1A-DR4O74302 440 aa6.12□□□□□ -1.43
RPN3YER021W TY1A-HP0C2I4 478 aaKnown RBP6.12□□□□□ -1.43
RPN3YER021W TY1A-AP0CX57 440 aa6.12□□□□□ -1.43
RPN3YER021W TY1A-PR1P0CX58 440 aa6.12□□□□□ -1.43
RPN3YER021W TY1A-ORP0CX59 440 aa6.12□□□□□ -1.43
RPN3YER021W TY1A-PR2P0CX60 440 aa6.12□□□□□ -1.43
RPN3YER021W TY1A-DR5P0CX65 440 aa6.12□□□□□ -1.43
RPN3YER021W TY1A-ER2P0CX66 440 aa6.12□□□□□ -1.43
RPN3YER021W TY1A-GR3P0CX67 440 aa6.12□□□□□ -1.43
RPN3YER021W TY1A-LR1P0CX68 440 aa6.12□□□□□ -1.43
RPN3YER021W TY1A-MR2P0CX69 440 aa6.12□□□□□ -1.43
RPN3YER021W TY1A-JR2P47099 440 aa6.12□□□□□ -1.43
RPN3YER021W PEX21P50091 288 aa6.12□□□□□ -1.43
RPN3YER021W TY1A-DR1Q03856 440 aa6.12□□□□□ -1.43
RPN3YER021W TY1A-ML1Q04706 440 aaKnown RBP6.12□□□□□ -1.43
RPN3YER021W TY1A-BRQ12217 440 aa6.12□□□□□ -1.43
RPN3YER021W TY1A-NL2Q12470 440 aa6.12□□□□□ -1.43
RPN3YER021W TY1A-GR2Q12485 440 aa6.12□□□□□ -1.43
RPN3YER021W SEC2P17065 759 aa6.11□□□□□ -1.43
RPN3YER021W LEO1P38439 464 aa6.11□□□□□ -1.43
RPN3YER021W ORC6P38826 435 aa6.11□□□□□ -1.43
RPN3YER021W TUM1Q08686 304 aaKnown RBP6.11□□□□□ -1.43
RPN3YER021W MON2P48563 1636 aaPredicted RBP6.11□□□□□ -1.43
RPN3YER021W YNR021WP53723 404 aaKnown RBP6.1□□□□□ -1.43
RPN3YER021W MET22P32179 357 aa6.09□□□□□ -1.43
RPN3YER021W RPN1P38764 993 aaKnown RBP6.09□□□□□ -1.43
RPN3YER021W TFB4Q12004 338 aa6.09□□□□□ -1.43
RPN3YER021W FRK1Q03002 865 aaPredicted RBP6.08□□□□□ -1.44
RPN3YER021W CSC1Q06538 782 aa6.08□□□□□ -1.44
RPN3YER021W CDC4P07834 779 aa6.07□□□□□ -1.44
RPN3YER021W GCD11P32481 527 aaKnown RBP6.07□□□□□ -1.44
RPN3YER021W GLC3P32775 704 aa6.06□□□□□ -1.44
RPN3YER021W PSE1P32337 1089 aaKnown RBP6.06□□□□□ -1.44
RPN3YER021W SPT16P32558 1035 aaKnown RBP6.06□□□□□ -1.44
RPN3YER021W INO80P53115 1489 aa6.05□□□□□ -1.44
RPN3YER021W NPL4P33755 580 aa6.04□□□□□ -1.44
RPN3YER021W BDP1P46678 594 aa6.04□□□□□ -1.44
RPN3YER021W RGR1P19263 1082 aa6.03□□□□□ -1.44
RPN3YER021W MVP1P40959 511 aaKnown RBP6.03□□□□□ -1.44
RPN3YER021W ENV9Q08651 330 aa6.03□□□□□ -1.44
RPN3YER021W AIM7Q12156 149 aa6.02□□□□□ -1.45
RPN3YER021W RRN7P40992 514 aa6.01□□□□□ -1.45
RPN3YER021W ATF2P53296 535 aa6□□□□□ -1.45
RPN3YER021W KIN1P13185 1064 aa5.98□□□□□ -1.45
RPN3YER021W HED1Q03937 162 aa5.98□□□□□ -1.45
RPN3YER021W YDR444WQ04093 687 aa5.97□□□□□ -1.45
RPN3YER021W YPR109WQ06104 294 aa5.97□□□□□ -1.45
RPN3YER021W YDL176WQ12027 708 aa5.97□□□□□ -1.45
RPN3YER021W TEA1P47988 759 aa5.96□□□□□ -1.46
RPN3YER021W CLB5P30283 435 aa5.94□□□□□ -1.46
RPN3YER021W ERF2Q06551 359 aa5.93□□□□□ -1.46
RPN3YER021W MET32Q12041 191 aa5.93□□□□□ -1.46
RPN3YER021W LCB5Q06147 687 aaKnown RBP5.93□□□□□ -1.46
RPN3YER021W ASH1P34233 588 aa5.92□□□□□ -1.46
RPN3YER021W PAT1P25644 796 aaKnown RBP5.91□□□□□ -1.46
RPN3YER021W NIS1P53939 407 aa5.91□□□□□ -1.46
RPN3YER021W KEX2P13134 814 aa5.9□□□□□ -1.46
RPN3YER021W MOD5P07884 428 aa5.89□□□□□ -1.47
RPN3YER021W AFT1P22149 690 aa5.88□□□□□ -1.47
RPN3YER021W GUA1P38625 525 aaKnown RBP5.88□□□□□ -1.47
RPN3YER021W PAC1P39946 494 aaKnown RBP5.88□□□□□ -1.47
RPN3YER021W FPK1P53739 893 aa5.87□□□□□ -1.47
RPN3YER021W SIT4P20604 311 aa5.86□□□□□ -1.47
RPN3YER021W RRD1P40454 393 aaKnown RBP5.86□□□□□ -1.47
RPN3YER021W PUS5Q06244 254 aa5.86□□□□□ -1.47
RPN3YER021W KTR1P27810 393 aaKnown RBP5.84□□□□□ -1.47
RPN3YER021W CSN12P47130 423 aa5.84□□□□□ -1.47
RPN3YER021W HST3P53687 447 aa5.84□□□□□ -1.47
RPN3YER021W YMR196WQ04336 1088 aa5.84□□□□□ -1.47
RPN3YER021W HST2P53686 357 aa5.84□□□□□ -1.48
RPN3YER021W TYW1Q08960 810 aaKnown RBP5.84□□□□□ -1.48
RPN3YER021W YJR115WP47152 169 aa5.83□□□□□ -1.48
RPN3YER021W SCJ1P25303 377 aa5.82□□□□□ -1.48
RPN3YER021W AGE1Q04412 482 aa5.82□□□□□ -1.48
RPN3YER021W GLN1P32288 370 aaKnown RBP5.81□□□□□ -1.48
RPN3YER021W RTF1P53064 558 aa5.81□□□□□ -1.48
RPN3YER021W DMA2P53924 522 aa5.81□□□□□ -1.48
RPN3YER021W SSA2P10592 639 aaKnown RBP5.8□□□□□ -1.48
RPN3YER021W YNL115CP53925 644 aa5.8□□□□□ -1.48
RPN3YER021W MMP1Q12372 583 aa5.8□□□□□ -1.48
RPN3YER021W HPC2Q01448 625 aa5.8□□□□□ -1.48
RPN3YER021W ESS1P22696 170 aa5.79□□□□□ -1.48
RPN3YER021W TUB4P53378 473 aa5.79□□□□□ -1.48
RPN3YER021W SLY41P22215 453 aa5.78□□□□□ -1.48
RPN3YER021W DNA2P38859 1522 aa5.77□□□□□ -1.49
RPN3YER021W YJU3P28321 313 aa5.76□□□□□ -1.49
RPN3YER021W TFB3Q03290 321 aa5.76□□□□□ -1.49
RPN3YER021W CAF120P53836 1060 aa5.76□□□□□ -1.49
RPN3YER021W PKH3Q03306 898 aaPredicted RBP5.76□□□□□ -1.49
RPN3YER021W MTC5Q03897 1148 aa5.75□□□□□ -1.49
RPN3YER021W ACO2P39533 789 aa5.74□□□□□ -1.49
RPN3YER021W BRL1P38770 471 aa5.73□□□□□ -1.49
RPN3YER021W TRM1P15565 570 aaKnown RBP5.72□□□□□ -1.49
RPN3YER021W PKC1P24583 1151 aa5.72□□□□□ -1.49
RPN3YER021W RSC30P38781 883 aa5.72□□□□□ -1.49
RPN3YER021W RAD59Q12223 238 aa5.72□□□□□ -1.49
RPN3YER021W HGH1P48362 394 aaKnown RBP5.71□□□□□ -1.5
RPN3YER021W PUS6P53294 404 aa5.71□□□□□ -1.5
RPN3YER021W KOG1P38873 1557 aa5.7□□□□□ -1.5
RPN3YER021W ARG8P18544 423 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms