RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	RAD54	P32863	898 aa		4.75	□□□□□ -1.65
PSF1	YDR013W	YDR444W	Q04093	687 aa		4.75	□□□□□ -1.65
PSF1	YDR013W	YDL176W	Q12027	708 aa		4.75	□□□□□ -1.65
PSF1	YDR013W	SIN3	P22579	1536 aa		4.74	□□□□□ -1.65
PSF1	YDR013W	SSK2	P53599	1579 aa		4.74	□□□□□ -1.65
PSF1	YDR013W	DNA2	P38859	1522 aa		4.73	□□□□□ -1.65
PSF1	YDR013W	RPP1B	P10622	106 aa	Known RBP	4.73	□□□□□ -1.65
PSF1	YDR013W	NUD1	P32336	851 aa		4.73	□□□□□ -1.65
PSF1	YDR013W	TAF7	Q05021	590 aa		4.73	□□□□□ -1.65
PSF1	YDR013W	YTA7	P40340	1379 aa		4.72	□□□□□ -1.65
PSF1	YDR013W	ECM5	Q03214	1411 aa		4.72	□□□□□ -1.65
PSF1	YDR013W	MMS22	Q06164	1454 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-DR4	O74302	440 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-H	P0C2I4	478 aa	Known RBP	4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-A	P0CX57	440 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-PR1	P0CX58	440 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-OR	P0CX59	440 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-PR2	P0CX60	440 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-DR5	P0CX65	440 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-ER2	P0CX66	440 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-GR3	P0CX67	440 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-LR1	P0CX68	440 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-MR2	P0CX69	440 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	BDP1	P46678	594 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-JR2	P47099	440 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-DR1	Q03856	440 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-ML1	Q04706	440 aa	Known RBP	4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-BR	Q12217	440 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-NL2	Q12470	440 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	TY1A-GR2	Q12485	440 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	ESP1	Q03018	1630 aa		4.71	□□□□□ -1.66
PSF1	YDR013W	SEC2	P17065	759 aa		4.7	□□□□□ -1.66
PSF1	YDR013W	SPT16	P32558	1035 aa	Known RBP	4.7	□□□□□ -1.66
PSF1	YDR013W	PEX21	P50091	288 aa		4.7	□□□□□ -1.66
PSF1	YDR013W	STU1	P38198	1513 aa		4.7	□□□□□ -1.66
PSF1	YDR013W	GCD11	P32481	527 aa	Known RBP	4.69	□□□□□ -1.66
PSF1	YDR013W	IFH1	P39520	1085 aa		4.69	□□□□□ -1.66
PSF1	YDR013W	LCB5	Q06147	687 aa	Known RBP	4.69	□□□□□ -1.66
PSF1	YDR013W	TUM1	Q08686	304 aa	Known RBP	4.68	□□□□□ -1.66
PSF1	YDR013W	GAP1	P19145	602 aa	Predicted RBP	4.67	□□□□□ -1.66
PSF1	YDR013W	HED1	Q03937	162 aa		4.67	□□□□□ -1.66
PSF1	YDR013W	NPL4	P33755	580 aa		4.66	□□□□□ -1.66
PSF1	YDR013W	MTC5	Q03897	1148 aa		4.66	□□□□□ -1.66
PSF1	YDR013W	POL1	P13382	1468 aa		4.65	□□□□□ -1.66
PSF1	YDR013W	CHD1	P32657	1468 aa		4.65	□□□□□ -1.66
PSF1	YDR013W	RRN7	P40992	514 aa		4.65	□□□□□ -1.67
PSF1	YDR013W	YPK9	Q12697	1472 aa		4.64	□□□□□ -1.67
PSF1	YDR013W	ASH1	P34233	588 aa		4.64	□□□□□ -1.67
PSF1	YDR013W	YDR090C	Q03193	310 aa		4.64	□□□□□ -1.67
PSF1	YDR013W	TFB4	Q12004	338 aa		4.64	□□□□□ -1.67
PSF1	YDR013W	RKR1	Q04781	1562 aa		4.64	□□□□□ -1.67
PSF1	YDR013W	MDS3	P53094	1487 aa		4.63	□□□□□ -1.67
PSF1	YDR013W	MET32	Q12041	191 aa		4.63	□□□□□ -1.67
PSF1	YDR013W	STH1	P32597	1359 aa		4.63	□□□□□ -1.67
PSF1	YDR013W	ATG2	P53855	1592 aa		4.62	□□□□□ -1.67
PSF1	YDR013W	RTT106	P40161	455 aa		4.62	□□□□□ -1.67
PSF1	YDR013W	CSC1	Q06538	782 aa		4.62	□□□□□ -1.67
PSF1	YDR013W	SMC4	Q12267	1418 aa		4.61	□□□□□ -1.67
PSF1	YDR013W	SET1	P38827	1080 aa	Known RBP	4.6	□□□□□ -1.67
PSF1	YDR013W	RRD1	P40454	393 aa	Known RBP	4.6	□□□□□ -1.67
PSF1	YDR013W	MYO4	P32492	1471 aa		4.6	□□□□□ -1.67
PSF1	YDR013W	UFD4	P33202	1483 aa		4.6	□□□□□ -1.67
PSF1	YDR013W	YOR1	P53049	1477 aa		4.6	□□□□□ -1.67
PSF1	YDR013W	BPT1	P14772	1559 aa		4.6	□□□□□ -1.67
PSF1	YDR013W	KIC1	P38692	1080 aa		4.59	□□□□□ -1.67
PSF1	YDR013W	SCC2	Q04002	1493 aa		4.58	□□□□□ -1.68
PSF1	YDR013W	AFT1	P22149	690 aa		4.58	□□□□□ -1.68
PSF1	YDR013W	TOP2	P06786	1428 aa	Known RBP	4.57	□□□□□ -1.68
PSF1	YDR013W	IKI3	Q06706	1349 aa	Known RBP	4.57	□□□□□ -1.68
PSF1	YDR013W	HST3	P53687	447 aa		4.57	□□□□□ -1.68
PSF1	YDR013W	PAT1	P25644	796 aa	Known RBP	4.56	□□□□□ -1.68
PSF1	YDR013W	CAF120	P53836	1060 aa		4.56	□□□□□ -1.68
PSF1	YDR013W	PAN1	P32521	1480 aa		4.56	□□□□□ -1.68
PSF1	YDR013W	YJR115W	P47152	169 aa		4.55	□□□□□ -1.68
PSF1	YDR013W	ORC6	P38826	435 aa		4.54	□□□□□ -1.68
PSF1	YDR013W	RPO31	P04051	1460 aa		4.54	□□□□□ -1.68
PSF1	YDR013W	SNQ2	P32568	1501 aa	Known RBP	4.53	□□□□□ -1.68
PSF1	YDR013W	PUS5	Q06244	254 aa		4.53	□□□□□ -1.68
PSF1	YDR013W	TRM732	Q03496	1420 aa		4.53	□□□□□ -1.68
PSF1	YDR013W	PEP1	P32319	1579 aa		4.53	□□□□□ -1.69
PSF1	YDR013W	POL5	P39985	1022 aa	Known RBP	4.52	□□□□□ -1.69
PSF1	YDR013W	ERF2	Q06551	359 aa		4.52	□□□□□ -1.69
PSF1	YDR013W	MLP2	P40457	1679 aa		4.51	□□□□□ -1.69
PSF1	YDR013W	MOD5	P07884	428 aa		4.51	□□□□□ -1.69
PSF1	YDR013W	TRK2	P28584	889 aa		4.51	□□□□□ -1.69
PSF1	YDR013W	ACO2	P39533	789 aa		4.51	□□□□□ -1.69
PSF1	YDR013W	PAC1	P39946	494 aa	Known RBP	4.51	□□□□□ -1.69
PSF1	YDR013W	SPP41	P38904	1435 aa		4.51	□□□□□ -1.69
PSF1	YDR013W	YCF1	P39109	1515 aa	Known RBP	4.51	□□□□□ -1.69
PSF1	YDR013W	GEA1	P47102	1408 aa	Predicted RBP	4.5	□□□□□ -1.69
PSF1	YDR013W	KEX2	P13134	814 aa		4.5	□□□□□ -1.69
PSF1	YDR013W	MVP1	P40959	511 aa	Known RBP	4.5	□□□□□ -1.69
PSF1	YDR013W	CKB1	P43639	278 aa		4.5	□□□□□ -1.69
PSF1	YDR013W	NOP7	P53261	605 aa	Known RBP	4.5	□□□□□ -1.69
PSF1	YDR013W	PDR15	Q04182	1529 aa	Known RBP	4.5	□□□□□ -1.69
PSF1	YDR013W	YPR109W	Q06104	294 aa		4.49	□□□□□ -1.69
PSF1	YDR013W	PAF1	P38351	445 aa		4.47	□□□□□ -1.69
PSF1	YDR013W	YGR035C	P53222	116 aa		4.47	□□□□□ -1.69
PSF1	YDR013W	VTH1	P40438	1549 aa		4.46	□□□□□ -1.7
PSF1	YDR013W	VTH2	P40890	1549 aa		4.46	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms