RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene PSF1, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSF1YDR013W FAP1P53971 965 aa9.98□□□□□ -0.81
PSF1YDR013W MTC1P47018 478 aaKnown RBP9.81□□□□□ -0.84
PSF1YDR013W PRY3P47033 881 aa9.43□□□□□ -0.9
PSF1YDR013W YCK3P39962 524 aa8.92□□□□□ -0.98
PSF1YDR013W AAD16Q02895 342 aa8.9□□□□□ -0.98
PSF1YDR013W PRI1P10363 409 aa8.84□□□□□ -0.99
PSF1YDR013W HAA1Q12753 694 aaKnown RBP8.74□□□□□ -1.01
PSF1YDR013W TSR3Q12094 313 aaKnown RBP8.33□□□□□ -1.08
PSF1YDR013W ISW2Q08773 1120 aa8.32□□□□□ -1.08
PSF1YDR013W RPG1P38249 964 aaKnown RBP8.31□□□□□ -1.08
PSF1YDR013W DRS1P32892 752 aaKnown RBP8.16□□□□□ -1.1
PSF1YDR013W MRPL32P25348 183 aa7.96□□□□□ -1.14
PSF1YDR013W YGL015CP33199 130 aa7.9□□□□□ -1.14
PSF1YDR013W BUD31P25337 157 aaPredicted RBP7.7□□□□□ -1.18
PSF1YDR013W RSE1Q04693 1361 aaKnown RBP7.53□□□□□ -1.2
PSF1YDR013W DIP2Q12220 943 aaPredicted RBP7.51□□□□□ -1.21
PSF1YDR013W CDC27P38042 758 aa7.44□□□□□ -1.22
PSF1YDR013W REB1P21538 810 aa7.42□□□□□ -1.22
PSF1YDR013W RPL17AP05740 184 aaKnown RBP7.39□□□□□ -1.23
PSF1YDR013W RPL17BP46990 184 aaKnown RBP7.39□□□□□ -1.23
PSF1YDR013W MAP2P38174 421 aaKnown RBP7.31□□□□□ -1.24
PSF1YDR013W UBP10P53874 792 aaPredicted RBP7.29□□□□□ -1.24
PSF1YDR013W SIS1P25294 352 aaKnown RBP7.24□□□□□ -1.25
PSF1YDR013W YKR023WP36119 530 aaKnown RBP7.16□□□□□ -1.26
PSF1YDR013W DCD1P06773 312 aa7.05□□□□□ -1.28
PSF1YDR013W UBP9P39967 754 aa7.05□□□□□ -1.28
PSF1YDR013W HOP09932 586 aa7.03□□□□□ -1.28
PSF1YDR013W SPT21P35209 758 aa7□□□□□ -1.29
PSF1YDR013W TFC8Q12308 588 aa6.99□□□□□ -1.29
PSF1YDR013W TIF4632P39936 914 aaKnown RBP6.98□□□□□ -1.29
PSF1YDR013W TGL3P40308 642 aa6.98□□□□□ -1.29
PSF1YDR013W SCY1P53009 804 aa6.98□□□□□ -1.29
PSF1YDR013W AVT3P36062 692 aa6.96□□□□□ -1.3
PSF1YDR013W SLX5P32828 619 aaKnown RBP6.92□□□□□ -1.3
PSF1YDR013W BCH2P36122 765 aa6.74□□□□□ -1.33
PSF1YDR013W YBL029C-AQ3E756 94 aa6.67□□□□□ -1.34
PSF1YDR013W MST1P07236 462 aa6.58□□□□□ -1.36
PSF1YDR013W VNX1P42839 908 aa6.54□□□□□ -1.36
PSF1YDR013W RIM101P33400 625 aa6.52□□□□□ -1.37
PSF1YDR013W YOR238WQ08634 303 aa6.5□□□□□ -1.37
PSF1YDR013W BDF1P35817 686 aa6.49□□□□□ -1.37
PSF1YDR013W EPS1P40557 701 aa6.49□□□□□ -1.37
PSF1YDR013W SPP1Q03012 353 aa6.46□□□□□ -1.38
PSF1YDR013W AIR2Q12476 344 aaKnown RBP6.46□□□□□ -1.38
PSF1YDR013W YJL171CP46992 396 aa6.41□□□□□ -1.38
PSF1YDR013W WSC3Q12215 556 aa6.41□□□□□ -1.38
PSF1YDR013W FKH1P40466 484 aa6.39□□□□□ -1.39
PSF1YDR013W NSR1P27476 414 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
PSF1YDR013W TIF11P38912 153 aaKnown RBP6.33□□□□□ -1.4
PSF1YDR013W YAP5P40574 245 aa6.31□□□□□ -1.4
PSF1YDR013W OXP1P28273 1286 aa6.29□□□□□ -1.4
PSF1YDR013W BFR2Q06631 534 aaKnown RBP6.29□□□□□ -1.4
PSF1YDR013W LDB19Q12502 818 aa6.25□□□□□ -1.41
PSF1YDR013W BMT6Q12291 365 aa6.24□□□□□ -1.41
PSF1YDR013W GTT3P39996 337 aa6.21□□□□□ -1.42
PSF1YDR013W PTP3P40048 928 aa6.21□□□□□ -1.42
PSF1YDR013W IOC2Q12072 812 aa6.2□□□□□ -1.42
PSF1YDR013W ULI1P43604 169 aa6.19□□□□□ -1.42
PSF1YDR013W YIL055CP40523 627 aaKnown RBP6.15□□□□□ -1.42
PSF1YDR013W BBC1P47068 1157 aa6.15□□□□□ -1.42
PSF1YDR013W AI2P03876 854 aa6.12□□□□□ -1.43
PSF1YDR013W PIB1Q06651 286 aa6.09□□□□□ -1.43
PSF1YDR013W RSM7P47150 247 aa6.08□□□□□ -1.44
PSF1YDR013W RTG1P32607 177 aa6.04□□□□□ -1.44
PSF1YDR013W NCR1Q12200 1170 aa6.01□□□□□ -1.45
PSF1YDR013W MSB4Q12317 492 aa6□□□□□ -1.45
PSF1YDR013W EAP1P36041 632 aaKnown RBP5.99□□□□□ -1.45
PSF1YDR013W TRP5P00931 707 aaKnown RBP5.98□□□□□ -1.45
PSF1YDR013W SET4P42948 560 aa5.96□□□□□ -1.46
PSF1YDR013W YAH1Q12184 172 aaKnown RBP5.96□□□□□ -1.46
PSF1YDR013W YOL036WQ08206 761 aa5.95□□□□□ -1.46
PSF1YDR013W YNL035CP53962 389 aaKnown RBP5.93□□□□□ -1.46
PSF1YDR013W SEC61P32915 480 aa5.92□□□□□ -1.46
PSF1YDR013W BCK2P33306 851 aa5.92□□□□□ -1.46
PSF1YDR013W SAP30P38429 201 aa5.86□□□□□ -1.47
PSF1YDR013W MRM1P25270 412 aa5.85□□□□□ -1.47
PSF1YDR013W PSD2P53037 1138 aaKnown RBP5.83□□□□□ -1.48
PSF1YDR013W TFG1P41895 735 aaPredicted RBP5.82□□□□□ -1.48
PSF1YDR013W CHL1P22516 861 aaPredicted RBP5.81□□□□□ -1.48
PSF1YDR013W YLR271WQ06152 274 aa5.81□□□□□ -1.48
PSF1YDR013W DAN4P47179 1161 aa5.79□□□□□ -1.48
PSF1YDR013W RGA2Q06407 1009 aa5.79□□□□□ -1.48
PSF1YDR013W DBP1P24784 617 aaKnown RBP5.78□□□□□ -1.48
PSF1YDR013W YFR006WP43590 535 aa5.78□□□□□ -1.48
PSF1YDR013W VMA1P17255 1071 aaKnown RBP5.77□□□□□ -1.49
PSF1YDR013W PRE3P38624 215 aa5.77□□□□□ -1.49
PSF1YDR013W YDL129WQ07555 291 aa5.77□□□□□ -1.49
PSF1YDR013W YMR1P47147 688 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
PSF1YDR013W SAM3Q08986 587 aa5.76□□□□□ -1.49
PSF1YDR013W VPS29P38759 282 aa5.74□□□□□ -1.49
PSF1YDR013W STS1P38637 319 aa5.72□□□□□ -1.49
PSF1YDR013W JIP4Q03361 876 aa5.72□□□□□ -1.49
PSF1YDR013W XDJ1P39102 459 aa5.71□□□□□ -1.5
PSF1YDR013W VRP1P37370 817 aa5.7□□□□□ -1.5
PSF1YDR013W YDR344CQ05510 147 aa5.68□□□□□ -1.5
PSF1YDR013W DPS1P04802 557 aaKnown RBP5.66□□□□□ -1.5
PSF1YDR013W GYP5Q12344 894 aa5.64□□□□□ -1.51
PSF1YDR013W HTA1P04911 132 aaKnown RBP5.63□□□□□ -1.51
PSF1YDR013W HTA2P04912 132 aa5.63□□□□□ -1.51
PSF1YDR013W DCW1P36091 449 aa5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms