RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C DIT2P21595 489 aa2.9□□□□□ -1.95
UFD2YDL190C SDH2P21801 266 aa2.9□□□□□ -1.95
UFD2YDL190C TY1A-DR4O74302 440 aa2.89□□□□□ -1.95
UFD2YDL190C TY1A-HP0C2I4 478 aaKnown RBP2.89□□□□□ -1.95
UFD2YDL190C TY1A-AP0CX57 440 aa2.89□□□□□ -1.95
UFD2YDL190C TY1A-PR1P0CX58 440 aa2.89□□□□□ -1.95
UFD2YDL190C TY1A-ORP0CX59 440 aa2.89□□□□□ -1.95
UFD2YDL190C TY1A-PR2P0CX60 440 aa2.89□□□□□ -1.95
UFD2YDL190C TY1A-DR5P0CX65 440 aa2.89□□□□□ -1.95
UFD2YDL190C TY1A-ER2P0CX66 440 aa2.89□□□□□ -1.95
UFD2YDL190C TY1A-GR3P0CX67 440 aa2.89□□□□□ -1.95
UFD2YDL190C TY1A-LR1P0CX68 440 aa2.89□□□□□ -1.95
UFD2YDL190C TY1A-MR2P0CX69 440 aa2.89□□□□□ -1.95
UFD2YDL190C SEC2P17065 759 aa2.89□□□□□ -1.95
UFD2YDL190C TY1A-JR2P47099 440 aa2.89□□□□□ -1.95
UFD2YDL190C TEA1P47988 759 aa2.89□□□□□ -1.95
UFD2YDL190C TY1A-DR1Q03856 440 aa2.89□□□□□ -1.95
UFD2YDL190C TY1A-ML1Q04706 440 aaKnown RBP2.89□□□□□ -1.95
UFD2YDL190C ERF2Q06551 359 aa2.89□□□□□ -1.95
UFD2YDL190C TY1A-BRQ12217 440 aa2.89□□□□□ -1.95
UFD2YDL190C TY1A-NL2Q12470 440 aa2.89□□□□□ -1.95
UFD2YDL190C TY1A-GR2Q12485 440 aa2.89□□□□□ -1.95
UFD2YDL190C NUP42P49686 430 aaKnown RBP2.89□□□□□ -1.95
UFD2YDL190C FRK1Q03002 865 aaPredicted RBP2.89□□□□□ -1.95
UFD2YDL190C SRC1Q03707 834 aa2.89□□□□□ -1.95
UFD2YDL190C TRK1P12685 1235 aa2.88□□□□□ -1.95
UFD2YDL190C TAF7Q05021 590 aa2.88□□□□□ -1.95
UFD2YDL190C CST6P40535 587 aa2.87□□□□□ -1.95
UFD2YDL190C ATF2P53296 535 aa2.87□□□□□ -1.95
UFD2YDL190C YMR196WQ04336 1088 aa2.87□□□□□ -1.95
UFD2YDL190C YNL115CP53925 644 aa2.86□□□□□ -1.95
UFD2YDL190C NIS1P53939 407 aa2.85□□□□□ -1.95
UFD2YDL190C BDP1P46678 594 aa2.85□□□□□ -1.95
UFD2YDL190C TUB4P53378 473 aa2.85□□□□□ -1.95
UFD2YDL190C LAM6Q08001 693 aa2.85□□□□□ -1.95
UFD2YDL190C PAC1P39946 494 aaKnown RBP2.84□□□□□ -1.95
UFD2YDL190C SLY41P22215 453 aa2.84□□□□□ -1.96
UFD2YDL190C AIR1P40507 360 aaKnown RBP2.84□□□□□ -1.96
UFD2YDL190C CLA4P48562 842 aa2.84□□□□□ -1.96
UFD2YDL190C RTF1P53064 558 aa2.84□□□□□ -1.96
UFD2YDL190C GLC3P32775 704 aa2.83□□□□□ -1.96
UFD2YDL190C LEO1P38439 464 aa2.83□□□□□ -1.96
UFD2YDL190C FPK1P53739 893 aa2.83□□□□□ -1.96
UFD2YDL190C SIT4P20604 311 aa2.83□□□□□ -1.96
UFD2YDL190C SCJ1P25303 377 aa2.82□□□□□ -1.96
UFD2YDL190C KXD1P53158 218 aa2.82□□□□□ -1.96
UFD2YDL190C TBF1Q02457 562 aa2.82□□□□□ -1.96
UFD2YDL190C PUS5Q06244 254 aa2.82□□□□□ -1.96
UFD2YDL190C GCR2Q01722 534 aa2.82□□□□□ -1.96
UFD2YDL190C AGE1Q04412 482 aa2.82□□□□□ -1.96
UFD2YDL190C YNR021WP53723 404 aaKnown RBP2.81□□□□□ -1.96
UFD2YDL190C MMP1Q12372 583 aa2.81□□□□□ -1.96
UFD2YDL190C HED1Q03937 162 aa2.8□□□□□ -1.96
UFD2YDL190C CDC4P07834 779 aa2.8□□□□□ -1.96
UFD2YDL190C BRE2P43132 505 aa2.8□□□□□ -1.96
UFD2YDL190C GLN1P32288 370 aaKnown RBP2.79□□□□□ -1.96
UFD2YDL190C PUS6P53294 404 aa2.79□□□□□ -1.96
UFD2YDL190C MOD5P07884 428 aa2.79□□□□□ -1.96
UFD2YDL190C ESS1P22696 170 aa2.79□□□□□ -1.96
UFD2YDL190C GBP2P25555 427 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
UFD2YDL190C HST2P53686 357 aa2.79□□□□□ -1.96
UFD2YDL190C TYW1Q08960 810 aaKnown RBP2.79□□□□□ -1.96
UFD2YDL190C YDL206WQ12424 762 aa2.79□□□□□ -1.96
UFD2YDL190C HST3P53687 447 aa2.79□□□□□ -1.96
UFD2YDL190C TRM1P15565 570 aaKnown RBP2.78□□□□□ -1.96
UFD2YDL190C GAR1P28007 205 aaKnown RBP2.78□□□□□ -1.96
UFD2YDL190C HXT10P43581 546 aa2.78□□□□□ -1.96
UFD2YDL190C ALR1Q08269 859 aa2.78□□□□□ -1.96
UFD2YDL190C LEU3P08638 886 aa2.78□□□□□ -1.97
UFD2YDL190C KIP2P28743 706 aa2.78□□□□□ -1.97
UFD2YDL190C ASH1P34233 588 aa2.78□□□□□ -1.97
UFD2YDL190C PDC1P06169 563 aaKnown RBP2.77□□□□□ -1.97
UFD2YDL190C YJU3P28321 313 aa2.77□□□□□ -1.97
UFD2YDL190C RPA14P50106 137 aa2.76□□□□□ -1.97
UFD2YDL190C SYH1Q02875 849 aaKnown RBP2.76□□□□□ -1.97
UFD2YDL190C PKH3Q03306 898 aaPredicted RBP2.76□□□□□ -1.97
UFD2YDL190C MET32Q12041 191 aa2.76□□□□□ -1.97
UFD2YDL190C ARG8P18544 423 aa2.76□□□□□ -1.97
UFD2YDL190C RRD1P40454 393 aaKnown RBP2.76□□□□□ -1.97
UFD2YDL190C CSN12P47130 423 aa2.76□□□□□ -1.97
UFD2YDL190C YPR097WQ06839 1073 aa2.76□□□□□ -1.97
UFD2YDL190C AIM7Q12156 149 aa2.76□□□□□ -1.97
UFD2YDL190C IXR1P33417 597 aa2.75□□□□□ -1.97
UFD2YDL190C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
UFD2YDL190C AFT1P22149 690 aa2.75□□□□□ -1.97
UFD2YDL190C TPD3P31383 635 aa2.74□□□□□ -1.97
UFD2YDL190C UGA3P26370 528 aa2.74□□□□□ -1.97
UFD2YDL190C KTR1P27810 393 aaKnown RBP2.74□□□□□ -1.97
UFD2YDL190C KIN1P13185 1064 aa2.73□□□□□ -1.97
UFD2YDL190C MET22P32179 357 aa2.73□□□□□ -1.97
UFD2YDL190C YJR115WP47152 169 aa2.73□□□□□ -1.97
UFD2YDL190C SRF1Q12516 437 aa2.73□□□□□ -1.97
UFD2YDL190C YDR444WQ04093 687 aa2.72□□□□□ -1.97
UFD2YDL190C RPN1P38764 993 aaKnown RBP2.71□□□□□ -1.98
UFD2YDL190C ITT1Q04638 464 aa2.71□□□□□ -1.98
UFD2YDL190C RAD59Q12223 238 aa2.71□□□□□ -1.98
UFD2YDL190C SSA2P10592 639 aaKnown RBP2.71□□□□□ -1.98
UFD2YDL190C RSC30P38781 883 aa2.71□□□□□ -1.98
UFD2YDL190C KOG1P38873 1557 aa2.7□□□□□ -1.98
UFD2YDL190C RGA1P39083 1007 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms