RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C MTC1P47018 478 aaKnown RBP5.56□□□□□ -1.52
UFD2YDL190C DRS1P32892 752 aaKnown RBP5.27□□□□□ -1.57
UFD2YDL190C FAP1P53971 965 aa5.05□□□□□ -1.6
UFD2YDL190C PRY3P47033 881 aa4.72□□□□□ -1.65
UFD2YDL190C PRI1P10363 409 aa4.65□□□□□ -1.66
UFD2YDL190C AAD16Q02895 342 aa4.65□□□□□ -1.66
UFD2YDL190C ISW2Q08773 1120 aa4.63□□□□□ -1.67
UFD2YDL190C DIP2Q12220 943 aaPredicted RBP4.59□□□□□ -1.67
UFD2YDL190C RPG1P38249 964 aaKnown RBP4.58□□□□□ -1.68
UFD2YDL190C TSR3Q12094 313 aaKnown RBP4.45□□□□□ -1.7
UFD2YDL190C RSE1Q04693 1361 aaKnown RBP4.43□□□□□ -1.7
UFD2YDL190C BFR2Q06631 534 aaKnown RBP4.4□□□□□ -1.7
UFD2YDL190C HAA1Q12753 694 aaKnown RBP4.39□□□□□ -1.71
UFD2YDL190C AVT3P36062 692 aa4.38□□□□□ -1.71
UFD2YDL190C YCK3P39962 524 aa4.35□□□□□ -1.71
UFD2YDL190C RPL17AP05740 184 aaKnown RBP4.3□□□□□ -1.72
UFD2YDL190C RPL17BP46990 184 aaKnown RBP4.3□□□□□ -1.72
UFD2YDL190C REB1P21538 810 aa4.3□□□□□ -1.72
UFD2YDL190C MRPL32P25348 183 aa4.28□□□□□ -1.72
UFD2YDL190C YGL015CP33199 130 aa4.07□□□□□ -1.76
UFD2YDL190C SPT21P35209 758 aa4.04□□□□□ -1.76
UFD2YDL190C CDC27P38042 758 aa4.03□□□□□ -1.76
UFD2YDL190C YKR023WP36119 530 aaKnown RBP4.01□□□□□ -1.77
UFD2YDL190C HOP09932 586 aa3.98□□□□□ -1.77
UFD2YDL190C DCD1P06773 312 aa3.96□□□□□ -1.78
UFD2YDL190C TFC8Q12308 588 aa3.94□□□□□ -1.78
UFD2YDL190C RIM101P33400 625 aa3.92□□□□□ -1.78
UFD2YDL190C MAP2P38174 421 aaKnown RBP3.92□□□□□ -1.78
UFD2YDL190C UBP10P53874 792 aaPredicted RBP3.9□□□□□ -1.79
UFD2YDL190C SCY1P53009 804 aa3.86□□□□□ -1.79
UFD2YDL190C TFA1P36100 482 aa3.84□□□□□ -1.79
UFD2YDL190C BCH2P36122 765 aa3.82□□□□□ -1.8
UFD2YDL190C YIL055CP40523 627 aaKnown RBP3.82□□□□□ -1.8
UFD2YDL190C OXP1P28273 1286 aa3.81□□□□□ -1.8
UFD2YDL190C SLX5P32828 619 aaKnown RBP3.81□□□□□ -1.8
UFD2YDL190C PTP3P40048 928 aa3.81□□□□□ -1.8
UFD2YDL190C TIF4632P39936 914 aaKnown RBP3.78□□□□□ -1.8
UFD2YDL190C YAH1Q12184 172 aaKnown RBP3.77□□□□□ -1.81
UFD2YDL190C EPS1P40557 701 aa3.73□□□□□ -1.81
UFD2YDL190C TGL3P40308 642 aa3.72□□□□□ -1.81
UFD2YDL190C RSM7P47150 247 aa3.72□□□□□ -1.81
UFD2YDL190C BDF1P35817 686 aa3.71□□□□□ -1.82
UFD2YDL190C BBC1P47068 1157 aa3.7□□□□□ -1.82
UFD2YDL190C AI2P03876 854 aa3.68□□□□□ -1.82
UFD2YDL190C BUD31P25337 157 aaPredicted RBP3.68□□□□□ -1.82
UFD2YDL190C UBP9P39967 754 aa3.65□□□□□ -1.83
UFD2YDL190C YLR271WQ06152 274 aa3.65□□□□□ -1.83
UFD2YDL190C SSP1P38871 571 aa3.63□□□□□ -1.83
UFD2YDL190C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
UFD2YDL190C YOR238WQ08634 303 aa3.6□□□□□ -1.83
UFD2YDL190C SIS1P25294 352 aaKnown RBP3.57□□□□□ -1.84
UFD2YDL190C MRM1P25270 412 aa3.57□□□□□ -1.84
UFD2YDL190C YAP5P40574 245 aa3.57□□□□□ -1.84
UFD2YDL190C PSD2P53037 1138 aaKnown RBP3.57□□□□□ -1.84
UFD2YDL190C MST1P07236 462 aa3.53□□□□□ -1.84
UFD2YDL190C YBL029C-AQ3E756 94 aa3.53□□□□□ -1.84
UFD2YDL190C GTT3P39996 337 aa3.53□□□□□ -1.84
UFD2YDL190C PIB1Q06651 286 aa3.53□□□□□ -1.84
UFD2YDL190C WSC3Q12215 556 aa3.53□□□□□ -1.84
UFD2YDL190C NSR1P27476 414 aaKnown RBP RIP-Chip data3.53□□□□□ -1.85not detected
UFD2YDL190C MGA2P40578 1113 aa3.53□□□□□ -1.85
UFD2YDL190C CST9Q06032 482 aa3.53□□□□□ -1.85
UFD2YDL190C SPP1Q03012 353 aa3.49□□□□□ -1.85
UFD2YDL190C VNX1P42839 908 aa3.48□□□□□ -1.85
UFD2YDL190C RTG3P38165 486 aa3.47□□□□□ -1.85
UFD2YDL190C YFR006WP43590 535 aa3.46□□□□□ -1.85
UFD2YDL190C DBP1P24784 617 aaKnown RBP3.45□□□□□ -1.86
UFD2YDL190C YMR1P47147 688 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
UFD2YDL190C VPS29P38759 282 aa3.44□□□□□ -1.86
UFD2YDL190C RCR1P38212 213 aa3.44□□□□□ -1.86
UFD2YDL190C TIF11P38912 153 aaKnown RBP3.43□□□□□ -1.86
UFD2YDL190C STS1P38637 319 aa3.41□□□□□ -1.86
UFD2YDL190C SET4P42948 560 aa3.41□□□□□ -1.86
UFD2YDL190C ULI1P43604 169 aa3.41□□□□□ -1.86
UFD2YDL190C VMA1P17255 1071 aaKnown RBP3.39□□□□□ -1.87
UFD2YDL190C YJL171CP46992 396 aa3.39□□□□□ -1.87
UFD2YDL190C YOL036WQ08206 761 aa3.39□□□□□ -1.87
UFD2YDL190C LDB19Q12502 818 aa3.39□□□□□ -1.87
UFD2YDL190C MSB4Q12317 492 aa3.38□□□□□ -1.87
UFD2YDL190C EAP1P36041 632 aaKnown RBP3.38□□□□□ -1.87
UFD2YDL190C IOC2Q12072 812 aa3.36□□□□□ -1.87
UFD2YDL190C TRP5P00931 707 aaKnown RBP3.35□□□□□ -1.87
UFD2YDL190C MIF2P35201 549 aa3.35□□□□□ -1.87
UFD2YDL190C FKH1P40466 484 aa3.35□□□□□ -1.87
UFD2YDL190C GYP5Q12344 894 aa3.35□□□□□ -1.87
UFD2YDL190C SAM3Q08986 587 aa3.34□□□□□ -1.87
UFD2YDL190C AIR2Q12476 344 aaKnown RBP3.34□□□□□ -1.87
UFD2YDL190C RTG1P32607 177 aa3.34□□□□□ -1.87
UFD2YDL190C RAM2P29703 316 aa3.33□□□□□ -1.88
UFD2YDL190C DCW1P36091 449 aa3.33□□□□□ -1.88
UFD2YDL190C NCR1Q12200 1170 aa3.32□□□□□ -1.88
UFD2YDL190C MAK11P20484 414 aaKnown RBP3.32□□□□□ -1.88
UFD2YDL190C TFG1P41895 735 aaPredicted RBP3.32□□□□□ -1.88
UFD2YDL190C HTA1P04911 132 aaKnown RBP3.31□□□□□ -1.88
UFD2YDL190C HTA2P04912 132 aa3.31□□□□□ -1.88
UFD2YDL190C YNL035CP53962 389 aaKnown RBP3.31□□□□□ -1.88
UFD2YDL190C BMT6Q12291 365 aa3.31□□□□□ -1.88
UFD2YDL190C GRE2Q12068 342 aaKnown RBP3.3□□□□□ -1.88
UFD2YDL190C ABP1P15891 592 aaKnown RBP3.3□□□□□ -1.88
UFD2YDL190C ATH1P48016 1211 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms