RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W TY1A-DR5P0CX65 440 aa9.84□□□□□ -0.83
RER1YCL001W TY1A-ER2P0CX66 440 aa9.84□□□□□ -0.83
RER1YCL001W TY1A-GR3P0CX67 440 aa9.84□□□□□ -0.83
RER1YCL001W TY1A-LR1P0CX68 440 aa9.84□□□□□ -0.83
RER1YCL001W TY1A-MR2P0CX69 440 aa9.84□□□□□ -0.83
RER1YCL001W TY1A-JR2P47099 440 aa9.84□□□□□ -0.83
RER1YCL001W TY1A-DR1Q03856 440 aa9.84□□□□□ -0.83
RER1YCL001W TY1A-ML1Q04706 440 aaKnown RBP9.84□□□□□ -0.83
RER1YCL001W TY1A-BRQ12217 440 aa9.84□□□□□ -0.83
RER1YCL001W TY1A-NL2Q12470 440 aa9.84□□□□□ -0.83
RER1YCL001W TY1A-GR2Q12485 440 aa9.84□□□□□ -0.83
RER1YCL001W IES2P40154 320 aa9.83□□□□□ -0.84
RER1YCL001W GCD11P32481 527 aaKnown RBP9.82□□□□□ -0.84
RER1YCL001W SEC2P17065 759 aa9.81□□□□□ -0.84
RER1YCL001W SPB4P25808 606 aaPredicted RBP9.79□□□□□ -0.84
RER1YCL001W CLB5P30283 435 aa9.79□□□□□ -0.84
RER1YCL001W NUP42P49686 430 aaKnown RBP9.79□□□□□ -0.84
RER1YCL001W ERG12P07277 443 aa9.76□□□□□ -0.85
RER1YCL001W SPT16P32558 1035 aaKnown RBP9.75□□□□□ -0.85
RER1YCL001W YPL062WQ02781 134 aa9.74□□□□□ -0.85
RER1YCL001W KEX2P13134 814 aa9.73□□□□□ -0.85
RER1YCL001W ERF2Q06551 359 aa9.71□□□□□ -0.86
RER1YCL001W DIT2P21595 489 aa9.7□□□□□ -0.86
RER1YCL001W RRN7P40992 514 aa9.7□□□□□ -0.86
RER1YCL001W PAT1P25644 796 aaKnown RBP9.69□□□□□ -0.86
RER1YCL001W CST6P40535 587 aa9.69□□□□□ -0.86
RER1YCL001W BRE2P43132 505 aa9.67□□□□□ -0.86
RER1YCL001W TEA1P47988 759 aa9.67□□□□□ -0.86
RER1YCL001W RTF1P53064 558 aa9.66□□□□□ -0.86
RER1YCL001W LAM6Q08001 693 aa9.66□□□□□ -0.86
RER1YCL001W RQC2Q12532 1038 aaKnown RBP9.65□□□□□ -0.86
RER1YCL001W SIT4P20604 311 aa9.64□□□□□ -0.87
RER1YCL001W GCR2Q01722 534 aa9.63□□□□□ -0.87
RER1YCL001W YNL115CP53925 644 aa9.62□□□□□ -0.87
RER1YCL001W AGE1Q04412 482 aa9.61□□□□□ -0.87
RER1YCL001W NIS1P53939 407 aa9.6□□□□□ -0.87
RER1YCL001W PAC1P39946 494 aaKnown RBP9.59□□□□□ -0.87
RER1YCL001W AIR1P40507 360 aaKnown RBP9.59□□□□□ -0.87
RER1YCL001W BDP1P46678 594 aa9.59□□□□□ -0.87
RER1YCL001W TUB4P53378 473 aa9.58□□□□□ -0.88
RER1YCL001W FRK1Q03002 865 aaPredicted RBP9.58□□□□□ -0.88
RER1YCL001W CLA4P48562 842 aa9.56□□□□□ -0.88
RER1YCL001W MOD5P07884 428 aa9.54□□□□□ -0.88
RER1YCL001W GBP2P25555 427 aaKnown RBP RIP-Chip data9.54□□□□□ -0.88not detected
RER1YCL001W GAR1P28007 205 aaKnown RBP9.54□□□□□ -0.88
RER1YCL001W FPK1P53739 893 aa9.53□□□□□ -0.88
RER1YCL001W YNR021WP53723 404 aaKnown RBP9.51□□□□□ -0.89
RER1YCL001W HED1Q03937 162 aa9.5□□□□□ -0.89
RER1YCL001W YMR196WQ04336 1088 aa9.5□□□□□ -0.89
RER1YCL001W CDC4P07834 779 aa9.49□□□□□ -0.89
RER1YCL001W ATF2P53296 535 aa9.47□□□□□ -0.89
RER1YCL001W SLY41P22215 453 aa9.46□□□□□ -0.9
RER1YCL001W HST2P53686 357 aa9.45□□□□□ -0.9
RER1YCL001W TPD3P31383 635 aa9.44□□□□□ -0.9
RER1YCL001W GLC3P32775 704 aa9.44□□□□□ -0.9
RER1YCL001W KXD1P53158 218 aa9.43□□□□□ -0.9
RER1YCL001W PDC1P06169 563 aaKnown RBP9.4□□□□□ -0.9
RER1YCL001W PUS5Q06244 254 aa9.4□□□□□ -0.9
RER1YCL001W SCJ1P25303 377 aa9.39□□□□□ -0.91
RER1YCL001W HXT10P43581 546 aa9.39□□□□□ -0.91
RER1YCL001W PUS6P53294 404 aa9.39□□□□□ -0.91
RER1YCL001W MET22P32179 357 aa9.38□□□□□ -0.91
RER1YCL001W RRD1P40454 393 aaKnown RBP9.38□□□□□ -0.91
RER1YCL001W ENV9Q08651 330 aa9.38□□□□□ -0.91
RER1YCL001W AIM7Q12156 149 aa9.38□□□□□ -0.91
RER1YCL001W MMP1Q12372 583 aa9.38□□□□□ -0.91
RER1YCL001W RPA14P50106 137 aa9.37□□□□□ -0.91
RER1YCL001W GLN1P32288 370 aaKnown RBP9.36□□□□□ -0.91
RER1YCL001W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.36□□□□□ -0.91not detected
RER1YCL001W MET32Q12041 191 aa9.36□□□□□ -0.91
RER1YCL001W TRM1P15565 570 aaKnown RBP9.35□□□□□ -0.91
RER1YCL001W TBF1Q02457 562 aa9.35□□□□□ -0.91
RER1YCL001W ALR1Q08269 859 aa9.34□□□□□ -0.91
RER1YCL001W YDL206WQ12424 762 aa9.34□□□□□ -0.91
RER1YCL001W YPR097WQ06839 1073 aa9.33□□□□□ -0.92
RER1YCL001W AFT1P22149 690 aa9.31□□□□□ -0.92
RER1YCL001W ASH1P34233 588 aa9.31□□□□□ -0.92
RER1YCL001W ESS1P22696 170 aa9.3□□□□□ -0.92
RER1YCL001W SYH1Q02875 849 aaKnown RBP9.29□□□□□ -0.92
RER1YCL001W YDR444WQ04093 687 aa9.29□□□□□ -0.92
RER1YCL001W HST3P53687 447 aa9.28□□□□□ -0.92
RER1YCL001W TYW1Q08960 810 aaKnown RBP9.28□□□□□ -0.92
RER1YCL001W YJU3P28321 313 aa9.26□□□□□ -0.93
RER1YCL001W KTR1P27810 393 aaKnown RBP9.25□□□□□ -0.93
RER1YCL001W LEU3P08638 886 aa9.24□□□□□ -0.93
RER1YCL001W RSC30P38781 883 aa9.23□□□□□ -0.93
RER1YCL001W KIP2P28743 706 aa9.21□□□□□ -0.94
RER1YCL001W CSN12P47130 423 aa9.21□□□□□ -0.94
RER1YCL001W LCB5Q06147 687 aaKnown RBP9.21□□□□□ -0.94
RER1YCL001W PKH3Q03306 898 aaPredicted RBP9.2□□□□□ -0.94
RER1YCL001W MSB3P48566 633 aaPredicted RBP9.19□□□□□ -0.94
RER1YCL001W IXR1P33417 597 aa9.18□□□□□ -0.94
RER1YCL001W MRT4P33201 236 aaKnown RBP9.17□□□□□ -0.94
RER1YCL001W YJR115WP47152 169 aa9.17□□□□□ -0.94
RER1YCL001W YDL176WQ12027 708 aa9.16□□□□□ -0.94
RER1YCL001W VAC17P25591 423 aa9.15□□□□□ -0.94
RER1YCL001W KIN1P13185 1064 aa9.14□□□□□ -0.95
RER1YCL001W ARG8P18544 423 aa9.14□□□□□ -0.95
RER1YCL001W RTT106P40161 455 aa9.11□□□□□ -0.95
RER1YCL001W RAD59Q12223 238 aa9.11□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms