RNA–Protein interactions for RNA: YBR012W-A

YBR012W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YBR012W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR012W-AYBR012W-A DIT2P21595 489 aa5.97□□□□□ -1.45
YBR012W-AYBR012W-A PAT1P25644 796 aaKnown RBP5.97□□□□□ -1.45
YBR012W-AYBR012W-A SPT16P32558 1035 aaKnown RBP5.97□□□□□ -1.45
YBR012W-AYBR012W-A TRK1P12685 1235 aa5.96□□□□□ -1.46
YBR012W-AYBR012W-A YPL062WQ02781 134 aa5.96□□□□□ -1.46
YBR012W-AYBR012W-A SEC2P17065 759 aa5.94□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-DR4O74302 440 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-HP0C2I4 478 aaKnown RBP5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-AP0CX57 440 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-PR1P0CX58 440 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-ORP0CX59 440 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-PR2P0CX60 440 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-DR5P0CX65 440 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-ER2P0CX66 440 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-GR3P0CX67 440 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-LR1P0CX68 440 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-MR2P0CX69 440 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A KEX2P13134 814 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A SDH2P21801 266 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-JR2P47099 440 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-DR1Q03856 440 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-ML1Q04706 440 aaKnown RBP5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-BRQ12217 440 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-NL2Q12470 440 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A TY1A-GR2Q12485 440 aa5.93□□□□□ -1.46
YBR012W-AYBR012W-A RTF1P53064 558 aa5.92□□□□□ -1.46
YBR012W-AYBR012W-A ATF2P53296 535 aa5.92□□□□□ -1.46
YBR012W-AYBR012W-A RRN7P40992 514 aa5.91□□□□□ -1.46
YBR012W-AYBR012W-A YNR021WP53723 404 aaKnown RBP5.9□□□□□ -1.47
YBR012W-AYBR012W-A YNL115CP53925 644 aa5.89□□□□□ -1.47
YBR012W-AYBR012W-A ERF2Q06551 359 aa5.89□□□□□ -1.47
YBR012W-AYBR012W-A SIT4P20604 311 aa5.88□□□□□ -1.47
YBR012W-AYBR012W-A NIS1P53939 407 aa5.88□□□□□ -1.47
YBR012W-AYBR012W-A YMR196WQ04336 1088 aa5.88□□□□□ -1.47
YBR012W-AYBR012W-A FPK1P53739 893 aa5.85□□□□□ -1.47
YBR012W-AYBR012W-A GLC3P32775 704 aa5.84□□□□□ -1.47
YBR012W-AYBR012W-A TUB4P53378 473 aa5.84□□□□□ -1.47
YBR012W-AYBR012W-A SLY41P22215 453 aa5.83□□□□□ -1.48
YBR012W-AYBR012W-A CST6P40535 587 aa5.83□□□□□ -1.48
YBR012W-AYBR012W-A FRK1Q03002 865 aaPredicted RBP5.83□□□□□ -1.48
YBR012W-AYBR012W-A LAM6Q08001 693 aa5.83□□□□□ -1.48
YBR012W-AYBR012W-A BDP1P46678 594 aa5.82□□□□□ -1.48
YBR012W-AYBR012W-A AGE1Q04412 482 aa5.82□□□□□ -1.48
YBR012W-AYBR012W-A AIM7Q12156 149 aa5.82□□□□□ -1.48
YBR012W-AYBR012W-A PAC1P39946 494 aaKnown RBP5.81□□□□□ -1.48
YBR012W-AYBR012W-A LEU3P08638 886 aa5.8□□□□□ -1.48
YBR012W-AYBR012W-A KXD1P53158 218 aa5.8□□□□□ -1.48
YBR012W-AYBR012W-A HST2P53686 357 aa5.8□□□□□ -1.48
YBR012W-AYBR012W-A GLN1P32288 370 aaKnown RBP5.79□□□□□ -1.48
YBR012W-AYBR012W-A MMP1Q12372 583 aa5.79□□□□□ -1.48
YBR012W-AYBR012W-A PUS6P53294 404 aa5.78□□□□□ -1.48
YBR012W-AYBR012W-A TBF1Q02457 562 aa5.78□□□□□ -1.48
YBR012W-AYBR012W-A HED1Q03937 162 aa5.78□□□□□ -1.48
YBR012W-AYBR012W-A MOD5P07884 428 aa5.77□□□□□ -1.49
YBR012W-AYBR012W-A SCJ1P25303 377 aa5.75□□□□□ -1.49
YBR012W-AYBR012W-A BUB1P41695 1021 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
YBR012W-AYBR012W-A CDC4P07834 779 aa5.74□□□□□ -1.49
YBR012W-AYBR012W-A AIR1P40507 360 aaKnown RBP5.74□□□□□ -1.49
YBR012W-AYBR012W-A HXT10P43581 546 aa5.74□□□□□ -1.49
YBR012W-AYBR012W-A GCR2Q01722 534 aa5.74□□□□□ -1.49
YBR012W-AYBR012W-A ALR1Q08269 859 aa5.74□□□□□ -1.49
YBR012W-AYBR012W-A TPD3P31383 635 aa5.74□□□□□ -1.49
YBR012W-AYBR012W-A CLA4P48562 842 aa5.74□□□□□ -1.49
YBR012W-AYBR012W-A RPA14P50106 137 aa5.74□□□□□ -1.49
YBR012W-AYBR012W-A TRM1P15565 570 aaKnown RBP5.73□□□□□ -1.49
YBR012W-AYBR012W-A ESS1P22696 170 aa5.73□□□□□ -1.49
YBR012W-AYBR012W-A RPN1P38764 993 aaKnown RBP5.73□□□□□ -1.49
YBR012W-AYBR012W-A CSN12P47130 423 aa5.73□□□□□ -1.49
YBR012W-AYBR012W-A YDL206WQ12424 762 aa5.73□□□□□ -1.49
YBR012W-AYBR012W-A PDC1P06169 563 aaKnown RBP5.72□□□□□ -1.49
YBR012W-AYBR012W-A RRD1P40454 393 aaKnown RBP5.72□□□□□ -1.49
YBR012W-AYBR012W-A PUS5Q06244 254 aa5.72□□□□□ -1.49
YBR012W-AYBR012W-A YPR097WQ06839 1073 aa5.72□□□□□ -1.49
YBR012W-AYBR012W-A TYW1Q08960 810 aaKnown RBP5.72□□□□□ -1.49
YBR012W-AYBR012W-A BRE2P43132 505 aa5.71□□□□□ -1.5
YBR012W-AYBR012W-A SYH1Q02875 849 aaKnown RBP5.7□□□□□ -1.5
YBR012W-AYBR012W-A KIN1P13185 1064 aa5.69□□□□□ -1.5
YBR012W-AYBR012W-A PKH3Q03306 898 aaPredicted RBP5.69□□□□□ -1.5
YBR012W-AYBR012W-A SSA2P10592 639 aaKnown RBP5.68□□□□□ -1.5
YBR012W-AYBR012W-A YJU3P28321 313 aa5.68□□□□□ -1.5
YBR012W-AYBR012W-A HST3P53687 447 aa5.68□□□□□ -1.5
YBR012W-AYBR012W-A ARG8P18544 423 aa5.67□□□□□ -1.5
YBR012W-AYBR012W-A GBP2P25555 427 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
YBR012W-AYBR012W-A KTR1P27810 393 aaKnown RBP5.67□□□□□ -1.5
YBR012W-AYBR012W-A GAR1P28007 205 aaKnown RBP5.67□□□□□ -1.5
YBR012W-AYBR012W-A KIP2P28743 706 aa5.67□□□□□ -1.5
YBR012W-AYBR012W-A ASH1P34233 588 aa5.66□□□□□ -1.5
YBR012W-AYBR012W-A AFT1P22149 690 aa5.65□□□□□ -1.51
YBR012W-AYBR012W-A RSC30P38781 883 aa5.65□□□□□ -1.51
YBR012W-AYBR012W-A MET32Q12041 191 aa5.65□□□□□ -1.51
YBR012W-AYBR012W-A IXR1P33417 597 aa5.63□□□□□ -1.51
YBR012W-AYBR012W-A RAD59Q12223 238 aa5.61□□□□□ -1.51
YBR012W-AYBR012W-A VAC17P25591 423 aa5.59□□□□□ -1.51
YBR012W-AYBR012W-A RTT106P40161 455 aa5.59□□□□□ -1.51
YBR012W-AYBR012W-A MSB3P48566 633 aaPredicted RBP5.59□□□□□ -1.51
YBR012W-AYBR012W-A UGA3P26370 528 aa5.58□□□□□ -1.52
YBR012W-AYBR012W-A MRT4P33201 236 aaKnown RBP5.57□□□□□ -1.52
YBR012W-AYBR012W-A GUA1P38625 525 aaKnown RBP5.57□□□□□ -1.52
YBR012W-AYBR012W-A YJR115WP47152 169 aa5.56□□□□□ -1.52
YBR012W-AYBR012W-A SRF1Q12516 437 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms