RNA–Protein interactions for RNA: YBR012W-A

YBR012W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YBR012W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR012W-AYBR012W-A MTC1P47018 478 aaKnown RBP11.25□□□□□ -0.61
YBR012W-AYBR012W-A FAP1P53971 965 aa11.24□□□□□ -0.61
YBR012W-AYBR012W-A DRS1P32892 752 aaKnown RBP10.7□□□□□ -0.7
YBR012W-AYBR012W-A PRY3P47033 881 aa10.61□□□□□ -0.71
YBR012W-AYBR012W-A AAD16Q02895 342 aa10.07□□□□□ -0.8
YBR012W-AYBR012W-A YCK3P39962 524 aa10.01□□□□□ -0.81
YBR012W-AYBR012W-A PRI1P10363 409 aa9.99□□□□□ -0.81
YBR012W-AYBR012W-A HAA1Q12753 694 aaKnown RBP9.94□□□□□ -0.82
YBR012W-AYBR012W-A ISW2Q08773 1120 aa9.43□□□□□ -0.9
YBR012W-AYBR012W-A RPG1P38249 964 aaKnown RBP9.33□□□□□ -0.92
YBR012W-AYBR012W-A TSR3Q12094 313 aaKnown RBP9.33□□□□□ -0.92
YBR012W-AYBR012W-A DIP2Q12220 943 aaPredicted RBP9.31□□□□□ -0.92
YBR012W-AYBR012W-A MRPL32P25348 183 aa9.01□□□□□ -0.97
YBR012W-AYBR012W-A AVT3P36062 692 aa9□□□□□ -0.97
YBR012W-AYBR012W-A BFR2Q06631 534 aaKnown RBP9□□□□□ -0.97
YBR012W-AYBR012W-A YGL015CP33199 130 aa8.98□□□□□ -0.97
YBR012W-AYBR012W-A RSE1Q04693 1361 aaKnown RBP8.98□□□□□ -0.97
YBR012W-AYBR012W-A BUD31P25337 157 aaPredicted RBP8.77□□□□□ -1.01
YBR012W-AYBR012W-A RPL17AP05740 184 aaKnown RBP8.65□□□□□ -1.02
YBR012W-AYBR012W-A RPL17BP46990 184 aaKnown RBP8.65□□□□□ -1.02
YBR012W-AYBR012W-A REB1P21538 810 aa8.64□□□□□ -1.03
YBR012W-AYBR012W-A CDC27P38042 758 aa8.33□□□□□ -1.08
YBR012W-AYBR012W-A UBP10P53874 792 aaPredicted RBP8.3□□□□□ -1.08
YBR012W-AYBR012W-A SPT21P35209 758 aa8.25□□□□□ -1.09
YBR012W-AYBR012W-A MAP2P38174 421 aaKnown RBP8.22□□□□□ -1.09
YBR012W-AYBR012W-A SIS1P25294 352 aaKnown RBP8.21□□□□□ -1.1
YBR012W-AYBR012W-A YKR023WP36119 530 aaKnown RBP8.12□□□□□ -1.11
YBR012W-AYBR012W-A UBP9P39967 754 aa8.06□□□□□ -1.12
YBR012W-AYBR012W-A RIM101P33400 625 aa8.03□□□□□ -1.12
YBR012W-AYBR012W-A TFA1P36100 482 aa8.03□□□□□ -1.12
YBR012W-AYBR012W-A TFC8Q12308 588 aa7.98□□□□□ -1.13
YBR012W-AYBR012W-A HOP09932 586 aa7.97□□□□□ -1.13
YBR012W-AYBR012W-A TIF4632P39936 914 aaKnown RBP7.96□□□□□ -1.14
YBR012W-AYBR012W-A TGL3P40308 642 aa7.94□□□□□ -1.14
YBR012W-AYBR012W-A DCD1P06773 312 aa7.9□□□□□ -1.14
YBR012W-AYBR012W-A SLX5P32828 619 aaKnown RBP7.82□□□□□ -1.16
YBR012W-AYBR012W-A SCY1P53009 804 aa7.82□□□□□ -1.16
YBR012W-AYBR012W-A OXP1P28273 1286 aa7.74□□□□□ -1.17
YBR012W-AYBR012W-A YIL055CP40523 627 aaKnown RBP7.73□□□□□ -1.17
YBR012W-AYBR012W-A BCH2P36122 765 aa7.72□□□□□ -1.17
YBR012W-AYBR012W-A PTP3P40048 928 aa7.69□□□□□ -1.18
YBR012W-AYBR012W-A YAH1Q12184 172 aaKnown RBP7.57□□□□□ -1.2
YBR012W-AYBR012W-A RSM7P47150 247 aa7.56□□□□□ -1.2
YBR012W-AYBR012W-A EPS1P40557 701 aa7.55□□□□□ -1.2
YBR012W-AYBR012W-A BBC1P47068 1157 aa7.52□□□□□ -1.2
YBR012W-AYBR012W-A BDF1P35817 686 aa7.52□□□□□ -1.21
YBR012W-AYBR012W-A YBL029C-AQ3E756 94 aa7.51□□□□□ -1.21
YBR012W-AYBR012W-A MST1P07236 462 aa7.49□□□□□ -1.21
YBR012W-AYBR012W-A AI2P03876 854 aa7.47□□□□□ -1.21
YBR012W-AYBR012W-A SSP1P38871 571 aa7.43□□□□□ -1.22
YBR012W-AYBR012W-A YLR271WQ06152 274 aa7.43□□□□□ -1.22
YBR012W-AYBR012W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data7.42□□□□□ -1.22not detected
YBR012W-AYBR012W-A VNX1P42839 908 aa7.39□□□□□ -1.23
YBR012W-AYBR012W-A YOR238WQ08634 303 aa7.37□□□□□ -1.23
YBR012W-AYBR012W-A SPP1Q03012 353 aa7.31□□□□□ -1.24
YBR012W-AYBR012W-A AIR2Q12476 344 aaKnown RBP7.31□□□□□ -1.24
YBR012W-AYBR012W-A PSD2P53037 1138 aaKnown RBP7.3□□□□□ -1.24
YBR012W-AYBR012W-A YJL171CP46992 396 aa7.29□□□□□ -1.24
YBR012W-AYBR012W-A NSR1P27476 414 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
YBR012W-AYBR012W-A FKH1P40466 484 aa7.27□□□□□ -1.25
YBR012W-AYBR012W-A YAP5P40574 245 aa7.24□□□□□ -1.25
YBR012W-AYBR012W-A MGA2P40578 1113 aa7.24□□□□□ -1.25
YBR012W-AYBR012W-A MRM1P25270 412 aa7.21□□□□□ -1.26
YBR012W-AYBR012W-A WSC3Q12215 556 aa7.2□□□□□ -1.26
YBR012W-AYBR012W-A TIF11P38912 153 aaKnown RBP7.19□□□□□ -1.26
YBR012W-AYBR012W-A CST9Q06032 482 aa7.17□□□□□ -1.26
YBR012W-AYBR012W-A BMT6Q12291 365 aa7.11□□□□□ -1.27
YBR012W-AYBR012W-A RTG3P38165 486 aa7.1□□□□□ -1.27
YBR012W-AYBR012W-A GTT3P39996 337 aa7.09□□□□□ -1.27
YBR012W-AYBR012W-A LDB19Q12502 818 aa7.07□□□□□ -1.28
YBR012W-AYBR012W-A YMR1P47147 688 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
YBR012W-AYBR012W-A PIB1Q06651 286 aa7.03□□□□□ -1.28
YBR012W-AYBR012W-A VPS29P38759 282 aa7.02□□□□□ -1.28
YBR012W-AYBR012W-A IOC2Q12072 812 aa7.01□□□□□ -1.29
YBR012W-AYBR012W-A ULI1P43604 169 aa7.01□□□□□ -1.29
YBR012W-AYBR012W-A DBP1P24784 617 aaKnown RBP7□□□□□ -1.29
YBR012W-AYBR012W-A RCR1P38212 213 aa6.97□□□□□ -1.29
YBR012W-AYBR012W-A YFR006WP43590 535 aa6.95□□□□□ -1.3
YBR012W-AYBR012W-A STS1P38637 319 aa6.94□□□□□ -1.3
YBR012W-AYBR012W-A MSB4Q12317 492 aa6.92□□□□□ -1.3
YBR012W-AYBR012W-A VMA1P17255 1071 aaKnown RBP6.9□□□□□ -1.3
YBR012W-AYBR012W-A EAP1P36041 632 aaKnown RBP6.89□□□□□ -1.31
YBR012W-AYBR012W-A YOL036WQ08206 761 aa6.87□□□□□ -1.31
YBR012W-AYBR012W-A SET4P42948 560 aa6.86□□□□□ -1.31
YBR012W-AYBR012W-A SAM3Q08986 587 aa6.85□□□□□ -1.31
YBR012W-AYBR012W-A MAK11P20484 414 aaKnown RBP6.83□□□□□ -1.32
YBR012W-AYBR012W-A RAM2P29703 316 aa6.82□□□□□ -1.32
YBR012W-AYBR012W-A RTG1P32607 177 aa6.82□□□□□ -1.32
YBR012W-AYBR012W-A ABP1P15891 592 aaKnown RBP6.81□□□□□ -1.32
YBR012W-AYBR012W-A NCR1Q12200 1170 aa6.81□□□□□ -1.32
YBR012W-AYBR012W-A GYP5Q12344 894 aa6.79□□□□□ -1.32
YBR012W-AYBR012W-A MIF2P35201 549 aa6.78□□□□□ -1.32
YBR012W-AYBR012W-A TRP5P00931 707 aaKnown RBP6.77□□□□□ -1.32
YBR012W-AYBR012W-A SEC61P32915 480 aa6.76□□□□□ -1.33
YBR012W-AYBR012W-A BCK2P33306 851 aa6.75□□□□□ -1.33
YBR012W-AYBR012W-A HTA1P04911 132 aaKnown RBP6.74□□□□□ -1.33
YBR012W-AYBR012W-A HTA2P04912 132 aa6.74□□□□□ -1.33
YBR012W-AYBR012W-A YNL035CP53962 389 aaKnown RBP6.74□□□□□ -1.33
YBR012W-AYBR012W-A COQ8P27697 501 aa6.73□□□□□ -1.33
YBR012W-AYBR012W-A GRE2Q12068 342 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms