RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 KIF7Q2M1P5 1343 aa26.62■■□□□ 1.85
PCSK6-217ENST00000618548 CNTLNQ9NXG0 1405 aa26.61■■□□□ 1.85
PCSK6-217ENST00000618548 IGF1RP08069 1367 aa26.6■■□□□ 1.85
PCSK6-217ENST00000618548 SPRYD3Q8NCJ5 442 aa26.6■■□□□ 1.85
PCSK6-217ENST00000618548 UACAQ9BZF9 1416 aa26.59■■□□□ 1.85
PCSK6-217ENST00000618548 KTN1Q86UP2 1357 aaKnown RBP26.59■■□□□ 1.85
PCSK6-217ENST00000618548 CHGAP10645 457 aaKnown RBP26.57■■□□□ 1.84
PCSK6-217ENST00000618548 AKNAQ7Z591 1439 aa26.57■■□□□ 1.84
PCSK6-217ENST00000618548 PRXQ9BXM0 1461 aa26.56■■□□□ 1.84
PCSK6-217ENST00000618548 NLRP13Q86W25 1043 aa26.56■■□□□ 1.84
PCSK6-217ENST00000618548 PRKCSHP14314 528 aaPredicted RBP26.55■■□□□ 1.84
PCSK6-217ENST00000618548 PDE3BQ13370 1112 aa26.54■■□□□ 1.84
PCSK6-217ENST00000618548 FGD6Q6ZV73 1430 aa26.54■■□□□ 1.84
PCSK6-217ENST00000618548 PLEKHD1A6NEE1 506 aa26.53■■□□□ 1.84
PCSK6-217ENST00000618548 ST20-MTHFSA0A0A6YYL1 179 aa26.52■■□□□ 1.84
PCSK6-217ENST00000618548 ERICH3Q5RHP9 1530 aa26.51■■□□□ 1.83
PCSK6-217ENST00000618548 CRBNQ96SW2 442 aa26.51■■□□□ 1.83
PCSK6-217ENST00000618548 GZF1Q9H116 711 aaPredicted RBP26.51■■□□□ 1.83
PCSK6-217ENST00000618548 L1TD1Q5T7N2 865 aaKnown RBP26.51■■□□□ 1.83
PCSK6-217ENST00000618548 EIF4G1Q04637 1599 aaKnown RBP26.5■■□□□ 1.83
PCSK6-217ENST00000618548 MS4A1P11836 297 aa26.5■■□□□ 1.83
PCSK6-217ENST00000618548 MYBBP1AQ9BQG0 1328 aaKnown RBP26.48■■□□□ 1.83
PCSK6-217ENST00000618548 TMF1P82094 1093 aa26.48■■□□□ 1.83
PCSK6-217ENST00000618548 BRPF3Q9ULD4 1205 aa26.47■■□□□ 1.83
PCSK6-217ENST00000618548 TDRD9Q8NDG6 1382 aaKnown RBP26.46■■□□□ 1.83
PCSK6-217ENST00000618548 USP47Q96K76 1375 aa26.45■■□□□ 1.83
PCSK6-217ENST00000618548 NFKBIBQ15653 356 aa26.45■■□□□ 1.82
PCSK6-217ENST00000618548 KIF15Q9NS87 1388 aa26.44■■□□□ 1.82
PCSK6-217ENST00000618548 ARID4BQ4LE39 1312 aaPredicted RBP26.43■■□□□ 1.82
PCSK6-217ENST00000618548 ROCK2O75116 1388 aaKnown RBP26.42■■□□□ 1.82
PCSK6-217ENST00000618548 CDCA8Q53HL2 280 aa26.42■■□□□ 1.82
PCSK6-217ENST00000618548 CHMP7Q8WUX9 453 aaPredicted RBP26.41■■□□□ 1.82
PCSK6-217ENST00000618548 TNNT2P45379 298 aaPredicted RBP26.41■■□□□ 1.82
PCSK6-217ENST00000618548 PNNQ9H307 717 aaKnown RBP26.41■■□□□ 1.82
PCSK6-217ENST00000618548 FAM161AQ3B820 660 aa26.4■■□□□ 1.82
PCSK6-217ENST00000618548 FTSJ3Q8IY81 847 aaKnown RBP26.4■■□□□ 1.82
PCSK6-217ENST00000618548 NUP155O75694 1391 aa26.4■■□□□ 1.82
PCSK6-217ENST00000618548 NCLP19338 710 aaKnown RBP26.39■■□□□ 1.81
PCSK6-217ENST00000618548 NBPF8Q3BBV2 869 aa26.39■■□□□ 1.81
PCSK6-217ENST00000618548 C11orf95C9JLR9 678 aaPredicted RBP26.38■■□□□ 1.81
PCSK6-217ENST00000618548 GOLGA2Q08379 1002 aa26.36■■□□□ 1.81
PCSK6-217ENST00000618548 GOLGA6L22H0YM25 854 aa26.35■■□□□ 1.81
PCSK6-217ENST00000618548 CENPQQ7L2Z9 268 aaPredicted RBP26.35■■□□□ 1.81
PCSK6-217ENST00000618548 CDCA7LQ96GN5 454 aa26.34■■□□□ 1.81
PCSK6-217ENST00000618548 BACH2Q9BYV9 841 aa26.33■■□□□ 1.81
PCSK6-217ENST00000618548 RSPH6AQ9H0K4 717 aa26.32■■□□□ 1.8
PCSK6-217ENST00000618548 TIAM1Q13009 1591 aa26.32■■□□□ 1.8
PCSK6-217ENST00000618548 MYOM3Q5VTT5 1437 aa26.31■■□□□ 1.8
PCSK6-217ENST00000618548 CCDC146Q8IYE0 955 aa26.31■■□□□ 1.8
PCSK6-217ENST00000618548 MAPKBP1O60336 1514 aa26.3■■□□□ 1.8
PCSK6-217ENST00000618548 PNISRQ8TF01 805 aaKnown RBP26.29■■□□□ 1.8
PCSK6-217ENST00000618548 CADPSQ9ULU8 1353 aa26.28■■□□□ 1.8
PCSK6-217ENST00000618548 SMG6Q86US8 1419 aaKnown RBP26.28■■□□□ 1.8
PCSK6-217ENST00000618548 GOLGA6L3A6NEY3 463 aa26.28■■□□□ 1.8
PCSK6-217ENST00000618548 HSCBQ8IWL3 235 aa26.27■■□□□ 1.8
PCSK6-217ENST00000618548 HSP90AB1P08238 724 aaKnown RBP26.26■■□□□ 1.79
PCSK6-217ENST00000618548 PANK3Q9H999 370 aa26.26■■□□□ 1.79
PCSK6-217ENST00000618548 TOP2BQ02880 1626 aa26.26■■□□□ 1.79
PCSK6-217ENST00000618548 HFM1A2PYH4 1435 aa26.24■■□□□ 1.79
PCSK6-217ENST00000618548 SENP3Q9H4L4 574 aaPredicted RBP26.24■■□□□ 1.79
PCSK6-217ENST00000618548 FRAT2O75474 233 aaPredicted RBP26.23■■□□□ 1.79
PCSK6-217ENST00000618548 SLC24A1O60721 1099 aa26.23■■□□□ 1.79
PCSK6-217ENST00000618548 CFAP53Q96M91 514 aa26.22■■□□□ 1.79
PCSK6-217ENST00000618548 ZNF644Q9H582 1327 aaPredicted RBP26.22■■□□□ 1.79
PCSK6-217ENST00000618548 CASKIN1Q8WXD9 1431 aa26.22■■□□□ 1.79
PCSK6-217ENST00000618548 CLUAP1Q96AJ1 413 aa26.2■■□□□ 1.79
PCSK6-217ENST00000618548 ANKRD30AQ9BXX3 1397 aa26.2■■□□□ 1.79
PCSK6-217ENST00000618548 NCOA2Q15596 1464 aa26.2■■□□□ 1.79
PCSK6-217ENST00000618548 SKAP1Q86WV1 359 aa26.19■■□□□ 1.78
PCSK6-217ENST00000618548 FGD5Q6ZNL6 1462 aa26.19■■□□□ 1.78
PCSK6-217ENST00000618548 MYH16Q9H6N6 1097 aa26.18■■□□□ 1.78
PCSK6-217ENST00000618548 MFAP1P55081 439 aaKnown RBP26.17■■□□□ 1.78
PCSK6-217ENST00000618548 NAIPQ13075 1403 aa26.15■■□□□ 1.78
PCSK6-217ENST00000618548 VSIG10Q8N0Z9 540 aa26.13■■□□□ 1.77
PCSK6-217ENST00000618548 CFTRP13569 1480 aa26.12■■□□□ 1.77
PCSK6-217ENST00000618548 BRD4O60885 1362 aaPredicted RBP26.12■■□□□ 1.77
PCSK6-217ENST00000618548 PTMAP06454 111 aaKnown RBP26.12■■□□□ 1.77
PCSK6-217ENST00000618548 HSP90AA2PQ14568 343 aaPredicted RBP26.12■■□□□ 1.77
PCSK6-217ENST00000618548 RWDD1Q9H446 243 aaPredicted RBP26.12■■□□□ 1.77
PCSK6-217ENST00000618548 COG6Q9Y2V7 657 aa26.11■■□□□ 1.77
PCSK6-217ENST00000618548 CUX1P39880 1505 aa26.1■■□□□ 1.77
PCSK6-217ENST00000618548 DNTTIP2Q5QJE6 756 aaKnown RBP26.1■■□□□ 1.77
PCSK6-217ENST00000618548 FYCO1Q9BQS8 1478 aa26.1■■□□□ 1.77
PCSK6-217ENST00000618548 CENPJQ9HC77 1338 aaPredicted RBP26.09■■□□□ 1.77
PCSK6-217ENST00000618548 PMFBP1Q8TBY8 1022 aa26.08■■□□□ 1.77
PCSK6-217ENST00000618548 RAD54L2Q9Y4B4 1467 aa26.08■■□□□ 1.77
PCSK6-217ENST00000618548 U2SURPO15042 1029 aaKnown RBP26.08■■□□□ 1.77
PCSK6-217ENST00000618548 MSNP26038 577 aaKnown RBP26.08■■□□□ 1.77
PCSK6-217ENST00000618548 APAF1O14727 1248 aa26.07■■□□□ 1.76
PCSK6-217ENST00000618548 HNRNPMP52272 730 aaKnown RBP eCLIP26.07■■□□□ 1.761e-6■■■□□ 18.4
PCSK6-217ENST00000618548 TPRNQ4KMQ1 711 aa26.07■■□□□ 1.76
PCSK6-217ENST00000618548 MORC1Q86VD1 984 aa26.07■■□□□ 1.76
PCSK6-217ENST00000618548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.06■■□□□ 1.76
PCSK6-217ENST00000618548 BCL2L13Q9BXK5 485 aa26.06■■□□□ 1.76
PCSK6-217ENST00000618548 MAPK8IP3Q9UPT6 1336 aa26.04■■□□□ 1.76
PCSK6-217ENST00000618548 ADAMTS8Q9UP79 889 aa26.04■■□□□ 1.76
PCSK6-217ENST00000618548 GBP4Q96PP9 640 aa26.02■■□□□ 1.76
PCSK6-217ENST00000618548 ARID3AQ99856 593 aa26.02■■□□□ 1.76
PCSK6-217ENST00000618548 RRP7AQ9Y3A4 280 aaKnown RBP26.01■■□□□ 1.75
PCSK6-217ENST00000618548 FOXD4L1Q9NU39 408 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms