RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 BBXQ8WY36 941 aaPredicted RBP7.75□□□□□ -1.17
SYCP1-209ENST00000613524 ASXL2Q76L83 1435 aa7.75□□□□□ -1.17
SYCP1-209ENST00000613524 KIAA0556O60303 1618 aa7.75□□□□□ -1.17
SYCP1-209ENST00000613524 ADCY10Q96PN6 1610 aa7.75□□□□□ -1.17
SYCP1-209ENST00000613524 APLP2Q06481 763 aa7.74□□□□□ -1.17
SYCP1-209ENST00000613524 KLHL34Q8N239 644 aa7.74□□□□□ -1.17
SYCP1-209ENST00000613524 MLECQ14165 292 aa7.74□□□□□ -1.17
SYCP1-209ENST00000613524 CDK13Q14004 1512 aaKnown RBP7.73□□□□□ -1.17
SYCP1-209ENST00000613524 SHROOM2Q13796 1616 aa7.73□□□□□ -1.17
SYCP1-209ENST00000613524 RAPGEF3O95398 923 aa7.73□□□□□ -1.17
SYCP1-209ENST00000613524 CEP162Q5TB80 1403 aa7.73□□□□□ -1.17
SYCP1-209ENST00000613524 ITGAEP38570 1179 aa7.73□□□□□ -1.17
SYCP1-209ENST00000613524 NBR1Q14596 966 aa7.73□□□□□ -1.17
SYCP1-209ENST00000613524 SPRYD3Q8NCJ5 442 aa7.73□□□□□ -1.17
SYCP1-209ENST00000613524 TMEM132AQ24JP5 1023 aa7.72□□□□□ -1.17
SYCP1-209ENST00000613524 ARHGAP35Q9NRY4 1499 aa7.72□□□□□ -1.17
SYCP1-209ENST00000613524 ARID4BQ4LE39 1312 aaPredicted RBP7.72□□□□□ -1.17
SYCP1-209ENST00000613524 UGGT2Q9NYU1 1516 aa7.71□□□□□ -1.18
SYCP1-209ENST00000613524 PROM2Q8N271 834 aa7.7□□□□□ -1.18
SYCP1-209ENST00000613524 KIF21BO75037 1637 aa7.7□□□□□ -1.18
SYCP1-209ENST00000613524 ABCC2Q92887 1545 aa7.7□□□□□ -1.18
SYCP1-209ENST00000613524 ARXQ96QS3 562 aa7.69□□□□□ -1.18
SYCP1-209ENST00000613524 C14orf37Q86TY3 774 aa7.69□□□□□ -1.18
SYCP1-209ENST00000613524 ATP10BO94823 1461 aa7.68□□□□□ -1.18
SYCP1-209ENST00000613524 CDK11AQ9UQ88 783 aaPredicted RBP7.68□□□□□ -1.18
SYCP1-209ENST00000613524 MTUS2Q5JR59 1369 aa7.67□□□□□ -1.18
SYCP1-209ENST00000613524 KANK4Q5T7N3 995 aaPredicted RBP7.67□□□□□ -1.18
SYCP1-209ENST00000613524 CD109Q6YHK3 1445 aa7.67□□□□□ -1.18
SYCP1-209ENST00000613524 ZCCHC11Q5TAX3 1644 aaKnown RBP7.67□□□□□ -1.18
SYCP1-209ENST00000613524 NUP153P49790 1475 aaKnown RBP7.67□□□□□ -1.18
SYCP1-209ENST00000613524 AFAP1Q8N556 730 aa7.65□□□□□ -1.19
SYCP1-209ENST00000613524 ZNF644Q9H582 1327 aaPredicted RBP7.65□□□□□ -1.19
SYCP1-209ENST00000613524 FMN1Q68DA7 1419 aa7.64□□□□□ -1.19
SYCP1-209ENST00000613524 ABCC10Q5T3U5 1492 aa7.64□□□□□ -1.19
SYCP1-209ENST00000613524 WDR7Q9Y4E6 1490 aa7.64□□□□□ -1.19
SYCP1-209ENST00000613524 RAPGEF6Q8TEU7 1601 aa7.64□□□□□ -1.19
SYCP1-209ENST00000613524 HNRNPMP52272 730 aaKnown RBP eCLIP7.64□□□□□ -1.19
SYCP1-209ENST00000613524 FAM50AQ14320 339 aaKnown RBP7.64□□□□□ -1.19
SYCP1-209ENST00000613524 PODXL2Q9NZ53 605 aa7.64□□□□□ -1.19
SYCP1-209ENST00000613524 RNF39Q9H2S5 420 aa7.63□□□□□ -1.19
SYCP1-209ENST00000613524 SPINK5Q9NQ38 1064 aaPredicted RBP7.63□□□□□ -1.19
SYCP1-209ENST00000613524 CHIC2Q9UKJ5 165 aa7.63□□□□□ -1.19
SYCP1-209ENST00000613524 PCF11O94913 1555 aaKnown RBP7.63□□□□□ -1.19
SYCP1-209ENST00000613524 SAMD1Q6SPF0 538 aaPredicted RBP7.63□□□□□ -1.19
SYCP1-209ENST00000613524 EPRSP07814 1512 aaKnown RBP7.63□□□□□ -1.19
SYCP1-209ENST00000613524 CFDP1Q9UEE9 299 aaPredicted RBP7.62□□□□□ -1.19
SYCP1-209ENST00000613524 C1QBPQ07021 282 aaKnown RBP7.62□□□□□ -1.19
SYCP1-209ENST00000613524 NKX1-1Q15270 411 aaPredicted RBP7.62□□□□□ -1.19
SYCP1-209ENST00000613524 ABCA8O94911 1581 aa7.62□□□□□ -1.19
SYCP1-209ENST00000613524 SAMD9Q5K651 1589 aa7.62□□□□□ -1.19
SYCP1-209ENST00000613524 DIP2BQ9P265 1576 aa7.62□□□□□ -1.19
SYCP1-209ENST00000613524 KDM5BQ9UGL1 1544 aa7.62□□□□□ -1.19
SYCP1-209ENST00000613524 RNF25Q96BH1 459 aaPredicted RBP7.61□□□□□ -1.19
SYCP1-209ENST00000613524 CIZ1Q9ULV3 898 aaPredicted RBP7.61□□□□□ -1.19
SYCP1-209ENST00000613524 KIF13AQ9H1H9 1805 aa7.61□□□□□ -1.19
SYCP1-209ENST00000613524 COL17A1Q9UMD9 1497 aaPredicted RBP7.6□□□□□ -1.19
SYCP1-209ENST00000613524 HOMEZQ8IX15 550 aa7.6□□□□□ -1.19
SYCP1-209ENST00000613524 EFCAB5A4FU69 1503 aa7.59□□□□□ -1.19
SYCP1-209ENST00000613524 POLA2Q14181 598 aa7.59□□□□□ -1.19
SYCP1-209ENST00000613524 EFCAB2Q5VUJ9 269 aa7.59□□□□□ -1.19
SYCP1-209ENST00000613524 KDM6BO15054 1643 aa7.58□□□□□ -1.2
SYCP1-209ENST00000613524 SPOCK2Q92563 424 aa7.58□□□□□ -1.2
SYCP1-209ENST00000613524 KIF14Q15058 1648 aa7.58□□□□□ -1.2
SYCP1-209ENST00000613524 UHRF1BP1LA0JNW5 1464 aa7.57□□□□□ -1.2
SYCP1-209ENST00000613524 CCNB3Q8WWL7 1395 aa7.57□□□□□ -1.2
SYCP1-209ENST00000613524 MAPKBP1O60336 1514 aa7.57□□□□□ -1.2
SYCP1-209ENST00000613524 ARHGAP5Q13017 1502 aa7.57□□□□□ -1.2
SYCP1-209ENST00000613524 GGT6Q6P531 493 aa7.57□□□□□ -1.2
SYCP1-209ENST00000613524 HRCP23327 699 aa7.56□□□□□ -1.2
SYCP1-209ENST00000613524 CASKIN1Q8WXD9 1431 aa7.56□□□□□ -1.2
SYCP1-209ENST00000613524 SCAPERQ9BY12 1400 aa7.56□□□□□ -1.2
SYCP1-209ENST00000613524 HECW1Q76N89 1606 aa7.56□□□□□ -1.2
SYCP1-209ENST00000613524 CEBPAP49715 358 aaPredicted RBP7.56□□□□□ -1.2
SYCP1-209ENST00000613524 FANCAO15360 1455 aa7.56□□□□□ -1.2
SYCP1-209ENST00000613524 TTC37Q6PGP7 1564 aa7.55□□□□□ -1.2
SYCP1-209ENST00000613524 MAGI3Q5TCQ9 1506 aa7.55□□□□□ -1.2
SYCP1-209ENST00000613524 VPS8Q8N3P4 1428 aa7.55□□□□□ -1.2
SYCP1-209ENST00000613524 TROQ12816 1431 aaPredicted RBP7.55□□□□□ -1.2
SYCP1-209ENST00000613524 ESF1Q9H501 851 aaKnown RBP7.54□□□□□ -1.2
SYCP1-209ENST00000613524 PLCD3Q8N3E9 789 aa7.54□□□□□ -1.2
SYCP1-209ENST00000613524 LRRIQ1Q96JM4 1722 aa7.54□□□□□ -1.2
SYCP1-209ENST00000613524 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.53□□□□□ -1.2
SYCP1-209ENST00000613524 RRP7BPQ9NSQ0 103 aa7.53□□□□□ -1.2
SYCP1-209ENST00000613524 AKNAQ7Z591 1439 aa7.53□□□□□ -1.2
SYCP1-209ENST00000613524 ADGRL1O94910 1474 aa7.53□□□□□ -1.2
SYCP1-209ENST00000613524 KDM4FA0A1W2PPD8 638 aa7.52□□□□□ -1.21
SYCP1-209ENST00000613524 CCDC18Q5T9S5 1454 aa7.52□□□□□ -1.21
SYCP1-209ENST00000613524 TEX14Q8IWB6 1497 aa7.52□□□□□ -1.21
SYCP1-209ENST00000613524 FYCO1Q9BQS8 1478 aa7.52□□□□□ -1.21
SYCP1-209ENST00000613524 YEATS2Q9ULM3 1422 aa7.52□□□□□ -1.21
SYCP1-209ENST00000613524 SPAG9O60271 1321 aaKnown RBP7.51□□□□□ -1.21
SYCP1-209ENST00000613524 ABCB7O75027 752 aa7.51□□□□□ -1.21
SYCP1-209ENST00000613524 HSPA2P54652 639 aa7.51□□□□□ -1.21
SYCP1-209ENST00000613524 TSPY4P0CV99 314 aa7.5□□□□□ -1.21
SYCP1-209ENST00000613524 TSPY10P0CW01 314 aa7.5□□□□□ -1.21
SYCP1-209ENST00000613524 TRIM26Q12899 539 aaPredicted RBP7.5□□□□□ -1.21
SYCP1-209ENST00000613524 TRAPPC8Q9Y2L5 1435 aa7.5□□□□□ -1.21
SYCP1-209ENST00000613524 DENND4BO75064 1496 aaPredicted RBP7.49□□□□□ -1.21
SYCP1-209ENST00000613524 KIF3BO15066 747 aa7.49□□□□□ -1.21
SYCP1-209ENST00000613524 BRPF1P55201 1214 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms