RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 SIN3AQ96ST3 1273 aa10.66□□□□□ -0.7
RPA1-207ENST00000574049 CTTNBP2Q8WZ74 1663 aa10.65□□□□□ -0.7
RPA1-207ENST00000574049 EPRSP07814 1512 aaKnown RBP10.65□□□□□ -0.7
RPA1-207ENST00000574049 FOXD1Q16676 465 aa10.65□□□□□ -0.7
RPA1-207ENST00000574049 KLHL34Q8N239 644 aa10.65□□□□□ -0.71
RPA1-207ENST00000574049 TIAM1Q13009 1591 aa10.65□□□□□ -0.71
RPA1-207ENST00000574049 NCOA2Q15596 1464 aa10.64□□□□□ -0.71
RPA1-207ENST00000574049 CCDC18Q5T9S5 1454 aa10.63□□□□□ -0.71
RPA1-207ENST00000574049 RAB3GAP2Q9H2M9 1393 aa10.62□□□□□ -0.71
RPA1-207ENST00000574049 IRX6P78412 446 aaPredicted RBP10.62□□□□□ -0.71
RPA1-207ENST00000574049 TRHP20396 242 aaPredicted RBP10.61□□□□□ -0.71
RPA1-207ENST00000574049 DDX10Q13206 875 aaKnown RBP10.61□□□□□ -0.71
RPA1-207ENST00000574049 UACAQ9BZF9 1416 aa10.61□□□□□ -0.71
RPA1-207ENST00000574049 UGGT2Q9NYU1 1516 aa10.61□□□□□ -0.71
RPA1-207ENST00000574049 FGD6Q6ZV73 1430 aa10.61□□□□□ -0.71
RPA1-207ENST00000574049 NUP153P49790 1475 aaKnown RBP10.59□□□□□ -0.71
RPA1-207ENST00000574049 KIAA0556O60303 1618 aa10.59□□□□□ -0.71
RPA1-207ENST00000574049 ERCC6L2Q5T890 1561 aa10.59□□□□□ -0.71
RPA1-207ENST00000574049 MYOM3Q5VTT5 1437 aa10.59□□□□□ -0.71
RPA1-207ENST00000574049 EFCAB2Q5VUJ9 269 aa10.59□□□□□ -0.71
RPA1-207ENST00000574049 SENP3Q9H4L4 574 aaPredicted RBP10.58□□□□□ -0.72
RPA1-207ENST00000574049 CHD1O14646 1710 aa10.58□□□□□ -0.72
RPA1-207ENST00000574049 SETD5Q9C0A6 1442 aa10.57□□□□□ -0.72
RPA1-207ENST00000574049 ATP10BO94823 1461 aa10.57□□□□□ -0.72
RPA1-207ENST00000574049 AFAP1Q8N556 730 aa10.57□□□□□ -0.72
RPA1-207ENST00000574049 TROQ12816 1431 aaPredicted RBP10.56□□□□□ -0.72
RPA1-207ENST00000574049 BCL11AQ9H165 835 aa10.56□□□□□ -0.72
RPA1-207ENST00000574049 HECW1Q76N89 1606 aa10.56□□□□□ -0.72
RPA1-207ENST00000574049 FAM69CQ0P6D2 419 aa10.56□□□□□ -0.72
RPA1-207ENST00000574049 RRBP1Q9P2E9 1410 aaKnown RBP10.55□□□□□ -0.72
RPA1-207ENST00000574049 ARHGEF11O15085 1522 aa10.55□□□□□ -0.72
RPA1-207ENST00000574049 SAMD9Q5K651 1589 aa10.55□□□□□ -0.72
RPA1-207ENST00000574049 SALL2Q9Y467 1007 aaPredicted RBP10.53□□□□□ -0.72
RPA1-207ENST00000574049 KDM2AQ9Y2K7 1162 aa10.53□□□□□ -0.72
RPA1-207ENST00000574049 RAPGEF6Q8TEU7 1601 aa10.52□□□□□ -0.73
RPA1-207ENST00000574049 RGL3Q3MIN7 710 aa10.51□□□□□ -0.73
RPA1-207ENST00000574049 MAGI3Q5TCQ9 1506 aa10.51□□□□□ -0.73
RPA1-207ENST00000574049 ANP32CO43423 234 aa10.51□□□□□ -0.73
RPA1-207ENST00000574049 CHGAP10645 457 aaKnown RBP10.51□□□□□ -0.73
RPA1-207ENST00000574049 MLECQ14165 292 aa10.51□□□□□ -0.73
RPA1-207ENST00000574049 C14orf37Q86TY3 774 aa10.51□□□□□ -0.73
RPA1-207ENST00000574049 EHBP1L1Q8N3D4 1523 aa10.51□□□□□ -0.73
RPA1-207ENST00000574049 GGT6Q6P531 493 aa10.5□□□□□ -0.73
RPA1-207ENST00000574049 DHX57Q6P158 1386 aaKnown RBP10.5□□□□□ -0.73
RPA1-207ENST00000574049 MPHOSPH9Q99550 1183 aa10.5□□□□□ -0.73
RPA1-207ENST00000574049 SPAG9O60271 1321 aaKnown RBP10.49□□□□□ -0.73
RPA1-207ENST00000574049 TONSLQ96HA7 1378 aa10.49□□□□□ -0.73
RPA1-207ENST00000574049 PTPRKQ15262 1439 aa10.49□□□□□ -0.73
RPA1-207ENST00000574049 RAPGEF3O95398 923 aa10.49□□□□□ -0.73
RPA1-207ENST00000574049 PKD2Q13563 968 aa10.49□□□□□ -0.73
RPA1-207ENST00000574049 KIF3BO15066 747 aa10.48□□□□□ -0.73
RPA1-207ENST00000574049 MAP3K1Q13233 1512 aa10.48□□□□□ -0.73
RPA1-207ENST00000574049 NUP155O75694 1391 aa10.47□□□□□ -0.73
RPA1-207ENST00000574049 SUPT6HQ7KZ85 1726 aaKnown RBP10.47□□□□□ -0.73
RPA1-207ENST00000574049 ANKRD30AQ9BXX3 1397 aa10.47□□□□□ -0.73
RPA1-207ENST00000574049 ARHGAP5Q13017 1502 aa10.46□□□□□ -0.73
RPA1-207ENST00000574049 ARID4BQ4LE39 1312 aaPredicted RBP10.45□□□□□ -0.74
RPA1-207ENST00000574049 FAM9BQ8IZU0 186 aa10.45□□□□□ -0.74
RPA1-207ENST00000574049 GPATCH8Q9UKJ3 1502 aaKnown RBP10.45□□□□□ -0.74
RPA1-207ENST00000574049 ANP32EQ9BTT0 268 aa10.43□□□□□ -0.74
RPA1-207ENST00000574049 ASXL2Q76L83 1435 aa10.43□□□□□ -0.74
RPA1-207ENST00000574049 NPM3O75607 178 aaKnown RBP10.42□□□□□ -0.74
RPA1-207ENST00000574049 ABCC5O15440 1437 aa10.42□□□□□ -0.74
RPA1-207ENST00000574049 MIA2Q96PC5 1412 aa10.42□□□□□ -0.74
RPA1-207ENST00000574049 KIF15Q9NS87 1388 aa10.42□□□□□ -0.74
RPA1-207ENST00000574049 NPM2Q86SE8 214 aaKnown RBP10.42□□□□□ -0.74
RPA1-207ENST00000574049 DAPK1P53355 1430 aa10.41□□□□□ -0.74
RPA1-207ENST00000574049 HNRNPUQ00839 825 aaKnown RBP eCLIP10.41□□□□□ -0.74
RPA1-207ENST00000574049 PTPN23Q9H3S7 1636 aa10.41□□□□□ -0.74
RPA1-207ENST00000574049 SCAPERQ9BY12 1400 aa10.41□□□□□ -0.74
RPA1-207ENST00000574049 RSPH4AQ5TD94 716 aa10.41□□□□□ -0.74
RPA1-207ENST00000574049 ESF1Q9H501 851 aaKnown RBP10.41□□□□□ -0.74
RPA1-207ENST00000574049 KIF14Q15058 1648 aa10.41□□□□□ -0.74
RPA1-207ENST00000574049 CFAP43Q8NDM7 1665 aa10.41□□□□□ -0.74
RPA1-207ENST00000574049 CAMSAP2Q08AD1 1489 aa10.4□□□□□ -0.74
RPA1-207ENST00000574049 ABCC2Q92887 1545 aa10.4□□□□□ -0.74
RPA1-207ENST00000574049 NAIPQ13075 1403 aa10.4□□□□□ -0.74
RPA1-207ENST00000574049 EIF5BO60841 1220 aaKnown RBP10.4□□□□□ -0.75
RPA1-207ENST00000574049 ABCA8O94911 1581 aa10.39□□□□□ -0.75
RPA1-207ENST00000574049 CD109Q6YHK3 1445 aa10.39□□□□□ -0.75
RPA1-207ENST00000574049 C9orf84Q5VXU9 1444 aa10.38□□□□□ -0.75
RPA1-207ENST00000574049 ANKRD50Q9ULJ7 1429 aa10.38□□□□□ -0.75
RPA1-207ENST00000574049 L3MBTL2Q969R5 705 aa10.38□□□□□ -0.75
RPA1-207ENST00000574049 NBR1Q14596 966 aa10.37□□□□□ -0.75
RPA1-207ENST00000574049 CLASP1Q7Z460 1538 aa10.37□□□□□ -0.75
RPA1-207ENST00000574049 DCAF11Q8TEB1 546 aa10.37□□□□□ -0.75
RPA1-207ENST00000574049 STAG3Q9UJ98 1225 aa10.36□□□□□ -0.75
RPA1-207ENST00000574049 HFM1A2PYH4 1435 aa10.36□□□□□ -0.75
RPA1-207ENST00000574049 LRRIQ1Q96JM4 1722 aa10.35□□□□□ -0.75
RPA1-207ENST00000574049 CLSPNQ9HAW4 1339 aa10.35□□□□□ -0.75
RPA1-207ENST00000574049 NUTM2DQ5VT03 806 aaPredicted RBP10.35□□□□□ -0.75
RPA1-207ENST00000574049 WDR7Q9Y4E6 1490 aa10.35□□□□□ -0.75
RPA1-207ENST00000574049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.35□□□□□ -0.75
RPA1-207ENST00000574049 NCOA1Q15788 1441 aa10.34□□□□□ -0.75
RPA1-207ENST00000574049 TRAPPC8Q9Y2L5 1435 aa10.34□□□□□ -0.75
RPA1-207ENST00000574049 WASHC2CQ9Y4E1 1318 aa10.33□□□□□ -0.76
RPA1-207ENST00000574049 PLCH2O75038 1416 aa10.33□□□□□ -0.76
RPA1-207ENST00000574049 PPP1R15AO75807 674 aaPredicted RBP10.33□□□□□ -0.76
RPA1-207ENST00000574049 FANCAO15360 1455 aa10.33□□□□□ -0.76
RPA1-207ENST00000574049 RTL5Q5HYW3 569 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms