RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 CACNB1Q02641 598 aaPredicted RBP12.22□□□□□ -0.45
CNOT1-218ENST00000569732 STAG3Q9UJ98 1225 aa12.21□□□□□ -0.45
CNOT1-218ENST00000569732 CFAP43Q8NDM7 1665 aa12.2□□□□□ -0.46
CNOT1-218ENST00000569732 RAPGEF2Q9Y4G8 1499 aa12.2□□□□□ -0.46
CNOT1-218ENST00000569732 MAGI3Q5TCQ9 1506 aa12.19□□□□□ -0.46
CNOT1-218ENST00000569732 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
CNOT1-218ENST00000569732 CD109Q6YHK3 1445 aa12.16□□□□□ -0.46
CNOT1-218ENST00000569732 CTTNBP2Q8WZ74 1663 aa12.14□□□□□ -0.47
CNOT1-218ENST00000569732 GOLGA3Q08378 1498 aa12.14□□□□□ -0.47
CNOT1-218ENST00000569732 ABCA8O94911 1581 aa12.13□□□□□ -0.47
CNOT1-218ENST00000569732 KIF21BO75037 1637 aa12.11□□□□□ -0.47
CNOT1-218ENST00000569732 PKD2Q13563 968 aa12.11□□□□□ -0.47
CNOT1-218ENST00000569732 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
CNOT1-218ENST00000569732 SPOCK2Q92563 424 aa12.11□□□□□ -0.47
CNOT1-218ENST00000569732 ARAP3Q8WWN8 1544 aa12.11□□□□□ -0.47
CNOT1-218ENST00000569732 FBXO41Q8TF61 875 aa12.1□□□□□ -0.47
CNOT1-218ENST00000569732 MIER1Q8N108 512 aa12.08□□□□□ -0.48
CNOT1-218ENST00000569732 KCNH8Q96L42 1107 aa12.08□□□□□ -0.48
CNOT1-218ENST00000569732 PHLDB1Q86UU1 1377 aa12.07□□□□□ -0.48
CNOT1-218ENST00000569732 ADAMTSL3P82987 1691 aa12.05□□□□□ -0.48
CNOT1-218ENST00000569732 PTPRMP28827 1452 aa12.04□□□□□ -0.48
CNOT1-218ENST00000569732 FAM9AQ8IZU1 332 aaPredicted RBP12.04□□□□□ -0.48
CNOT1-218ENST00000569732 ABCA9Q8IUA7 1624 aa12.04□□□□□ -0.48
CNOT1-218ENST00000569732 NEO1Q92859 1461 aa12.02□□□□□ -0.49
CNOT1-218ENST00000569732 BCORL1Q5H9F3 1711 aa12□□□□□ -0.49
CNOT1-218ENST00000569732 ATP10BO94823 1461 aa12□□□□□ -0.49
CNOT1-218ENST00000569732 PRXQ9BXM0 1461 aa12□□□□□ -0.49
CNOT1-218ENST00000569732 PCF11O94913 1555 aaKnown RBP12□□□□□ -0.49
CNOT1-218ENST00000569732 PLCB2Q00722 1185 aa11.98□□□□□ -0.49
CNOT1-218ENST00000569732 MADDQ8WXG6 1647 aa11.97□□□□□ -0.49
CNOT1-218ENST00000569732 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
CNOT1-218ENST00000569732 FRMPD1Q5SYB0 1578 aa11.96□□□□□ -0.49
CNOT1-218ENST00000569732 LMTK3Q96Q04 1460 aa11.96□□□□□ -0.49
CNOT1-218ENST00000569732 ECM2O94769 699 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-218ENST00000569732 RAPGEF3O95398 923 aa11.95□□□□□ -0.5
CNOT1-218ENST00000569732 SAMD9Q5K651 1589 aa11.95□□□□□ -0.5
CNOT1-218ENST00000569732 RAPGEF6Q8TEU7 1601 aa11.94□□□□□ -0.5
CNOT1-218ENST00000569732 ARHGEF40Q8TER5 1519 aa11.94□□□□□ -0.5
CNOT1-218ENST00000569732 ARID4BQ4LE39 1312 aaPredicted RBP11.93□□□□□ -0.5
CNOT1-218ENST00000569732 ZBTB47Q9UFB7 747 aaPredicted RBP11.93□□□□□ -0.5
CNOT1-218ENST00000569732 ARID3CA6NKF2 412 aa11.92□□□□□ -0.5
CNOT1-218ENST00000569732 CFAP74Q9C0B2 1584 aa11.92□□□□□ -0.5
CNOT1-218ENST00000569732 RIMS1Q86UR5 1692 aaKnown RBP11.91□□□□□ -0.5
CNOT1-218ENST00000569732 RICTORQ6R327 1708 aa11.91□□□□□ -0.5
CNOT1-218ENST00000569732 DENND4BO75064 1496 aaPredicted RBP11.9□□□□□ -0.5
CNOT1-218ENST00000569732 P3H3Q8IVL6 736 aa11.9□□□□□ -0.5
CNOT1-218ENST00000569732 FANCAO15360 1455 aa11.89□□□□□ -0.51
CNOT1-218ENST00000569732 FHOD3Q2V2M9 1422 aa11.89□□□□□ -0.51
CNOT1-218ENST00000569732 POGZQ7Z3K3 1410 aa11.89□□□□□ -0.51
CNOT1-218ENST00000569732 NUP153P49790 1475 aaKnown RBP11.89□□□□□ -0.51
CNOT1-218ENST00000569732 ZMYM4Q5VZL5 1548 aa11.88□□□□□ -0.51
CNOT1-218ENST00000569732 AKNAQ7Z591 1439 aa11.87□□□□□ -0.51
CNOT1-218ENST00000569732 EFCAB5A4FU69 1503 aa11.87□□□□□ -0.51
CNOT1-218ENST00000569732 RBM42Q9BTD8 480 aaKnown RBP11.86□□□□□ -0.51
CNOT1-218ENST00000569732 MAGI2Q86UL8 1455 aa11.86□□□□□ -0.51
CNOT1-218ENST00000569732 ZFYVE16Q7Z3T8 1539 aa11.85□□□□□ -0.51
CNOT1-218ENST00000569732 PLEKHD1A6NEE1 506 aa11.84□□□□□ -0.51
CNOT1-218ENST00000569732 CIZ1Q9ULV3 898 aaPredicted RBP11.84□□□□□ -0.51
CNOT1-218ENST00000569732 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.84□□□□□ -0.51
CNOT1-218ENST00000569732 TTC37Q6PGP7 1564 aa11.84□□□□□ -0.51
CNOT1-218ENST00000569732 HAP1P54257 671 aaPredicted RBP11.83□□□□□ -0.52
CNOT1-218ENST00000569732 CERKQ8TCT0 537 aa11.83□□□□□ -0.52
CNOT1-218ENST00000569732 AKT1S1Q96B36 256 aa11.83□□□□□ -0.52
CNOT1-218ENST00000569732 FER1L4A9Z1Z3 1794 aa11.82□□□□□ -0.52
CNOT1-218ENST00000569732 HSPA2P54652 639 aa11.82□□□□□ -0.52
CNOT1-218ENST00000569732 SPDYE1Q8NFV5 336 aaPredicted RBP11.82□□□□□ -0.52
CNOT1-218ENST00000569732 SIGLEC1Q9BZZ2 1709 aa11.81□□□□□ -0.52
CNOT1-218ENST00000569732 RGL2O15211 777 aa11.81□□□□□ -0.52
CNOT1-218ENST00000569732 YEATS2Q9ULM3 1422 aa11.8□□□□□ -0.52
CNOT1-218ENST00000569732 HECW1Q76N89 1606 aa11.8□□□□□ -0.52
CNOT1-218ENST00000569732 PREX1Q8TCU6 1659 aa11.8□□□□□ -0.52
CNOT1-218ENST00000569732 BBXQ8WY36 941 aaPredicted RBP11.79□□□□□ -0.52
CNOT1-218ENST00000569732 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.79□□□□□ -0.52
CNOT1-218ENST00000569732 ARHGEF12Q9NZN5 1544 aa11.79□□□□□ -0.52
CNOT1-218ENST00000569732 EEA1Q15075 1411 aa11.77□□□□□ -0.52
CNOT1-218ENST00000569732 PLCH2O75038 1416 aa11.77□□□□□ -0.53
CNOT1-218ENST00000569732 ATP10AO60312 1499 aa11.76□□□□□ -0.53
CNOT1-218ENST00000569732 CLEC11AQ9Y240 323 aa11.76□□□□□ -0.53
CNOT1-218ENST00000569732 C9orf84Q5VXU9 1444 aa11.76□□□□□ -0.53
CNOT1-218ENST00000569732 SCAPERQ9BY12 1400 aa11.76□□□□□ -0.53
CNOT1-218ENST00000569732 MLECQ14165 292 aa11.75□□□□□ -0.53
CNOT1-218ENST00000569732 PRR29P0C7W0 189 aa11.73□□□□□ -0.53
CNOT1-218ENST00000569732 MYO5CQ9NQX4 1742 aa11.72□□□□□ -0.53
CNOT1-218ENST00000569732 CDK13Q14004 1512 aaKnown RBP11.72□□□□□ -0.53
CNOT1-218ENST00000569732 UHRF1BP1Q6BDS2 1440 aa11.72□□□□□ -0.53
CNOT1-218ENST00000569732 REM2Q8IYK8 340 aaPredicted RBP11.72□□□□□ -0.53
CNOT1-218ENST00000569732 STRCQ7RTU9 1775 aa11.72□□□□□ -0.53
CNOT1-218ENST00000569732 ZNF518AQ6AHZ1 1483 aa11.71□□□□□ -0.53
CNOT1-218ENST00000569732 DISP3Q9P2K9 1392 aa11.71□□□□□ -0.53
CNOT1-218ENST00000569732 RANGAP1P46060 587 aaPredicted RBP11.71□□□□□ -0.53
CNOT1-218ENST00000569732 GSE1Q14687 1217 aa11.71□□□□□ -0.53
CNOT1-218ENST00000569732 SOCS7O14512 581 aa11.7□□□□□ -0.54
CNOT1-218ENST00000569732 EFCAB2Q5VUJ9 269 aa11.7□□□□□ -0.54
CNOT1-218ENST00000569732 KDM5CP41229 1560 aa11.7□□□□□ -0.54
CNOT1-218ENST00000569732 REREQ9P2R6 1566 aa11.7□□□□□ -0.54
CNOT1-218ENST00000569732 KIF14Q15058 1648 aa11.68□□□□□ -0.54
CNOT1-218ENST00000569732 NUBP1P53384 320 aa11.68□□□□□ -0.54
CNOT1-218ENST00000569732 PAXIP1Q6ZW49 1069 aaPredicted RBP11.68□□□□□ -0.54
CNOT1-218ENST00000569732 CDK11AQ9UQ88 783 aaPredicted RBP11.68□□□□□ -0.54
CNOT1-218ENST00000569732 PTPRTO14522 1441 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms