RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
CNOT1-218ENST00000569732 AEBP2Q6ZN18 517 aaPredicted RBP21.09■□□□□ 0.97
CNOT1-218ENST00000569732 PHF23Q9BUL5 403 aaPredicted RBP18.61■□□□□ 0.57
CNOT1-218ENST00000569732 NISCHQ9Y2I1 1504 aa17.85■□□□□ 0.45
CNOT1-218ENST00000569732 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.44
CNOT1-218ENST00000569732 PLPPR3Q6T4P5 718 aa17.38■□□□□ 0.37
CNOT1-218ENST00000569732 FOXD1Q16676 465 aa16.49■□□□□ 0.23
CNOT1-218ENST00000569732 ABCC9O60706 1549 aa16.34■□□□□ 0.21
CNOT1-218ENST00000569732 ADRA2BP18089 450 aa16.29■□□□□ 0.2
CNOT1-218ENST00000569732 PPP6R1Q9UPN7 881 aa16.27■□□□□ 0.2
CNOT1-218ENST00000569732 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
CNOT1-218ENST00000569732 PIAS4Q8N2W9 510 aaPredicted RBP15.68■□□□□ 0.1
CNOT1-218ENST00000569732 KCNA4P22459 653 aa15.59■□□□□ 0.09
CNOT1-218ENST00000569732 RB1CC1Q8TDY2 1594 aa15.51■□□□□ 0.07
CNOT1-218ENST00000569732 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
CNOT1-218ENST00000569732 PPP4R3CPQ6ZMV5 832 aa15.38■□□□□ 0.05
CNOT1-218ENST00000569732 NACADO15069 1562 aa15.35■□□□□ 0.05
CNOT1-218ENST00000569732 NCBP3Q53F19 620 aaKnown RBP15.14■□□□□ 0.01
CNOT1-218ENST00000569732 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
CNOT1-218ENST00000569732 PABPN1Q86U42 306 aaKnown RBP eCLIP15.12■□□□□ 0.01
CNOT1-218ENST00000569732 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
CNOT1-218ENST00000569732 MYO15BQ96JP2 1530 aa15.08■□□□□ 0.01
CNOT1-218ENST00000569732 DCAF8L2P0C7V8 631 aa15.08■□□□□ 0
CNOT1-218ENST00000569732 BICRAQ9NZM4 1560 aa15.03■□□□□ -0
CNOT1-218ENST00000569732 MSH5O43196 834 aa15.01□□□□□ -0.01
CNOT1-218ENST00000569732 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
CNOT1-218ENST00000569732 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
CNOT1-218ENST00000569732 SHROOM4Q9ULL8 1493 aa14.9□□□□□ -0.02
CNOT1-218ENST00000569732 NPM3O75607 178 aaKnown RBP14.9□□□□□ -0.02
CNOT1-218ENST00000569732 CNKSR2Q8WXI2 1034 aa14.84□□□□□ -0.03
CNOT1-218ENST00000569732 DCAF1Q9Y4B6 1507 aa14.78□□□□□ -0.04
CNOT1-218ENST00000569732 CC2D2AQ9P2K1 1620 aa14.77□□□□□ -0.04
CNOT1-218ENST00000569732 CECR2Q9BXF3 1484 aa14.77□□□□□ -0.04
CNOT1-218ENST00000569732 ZCCHC6Q5VYS8 1495 aaKnown RBP14.75□□□□□ -0.05
CNOT1-218ENST00000569732 EIF4G1Q04637 1599 aaKnown RBP14.7□□□□□ -0.06
CNOT1-218ENST00000569732 CSRNP3Q8WYN3 585 aa14.7□□□□□ -0.06
CNOT1-218ENST00000569732 SCRIBQ14160 1630 aa14.66□□□□□ -0.06
CNOT1-218ENST00000569732 MAPK8IP2Q13387 824 aaPredicted RBP14.64□□□□□ -0.07
CNOT1-218ENST00000569732 DNAJC5Q9H3Z4 198 aa14.49□□□□□ -0.09
CNOT1-218ENST00000569732 RNF216Q9NWF9 866 aaPredicted RBP14.42□□□□□ -0.1
CNOT1-218ENST00000569732 ZBTB22O15209 634 aa14.34□□□□□ -0.11
CNOT1-218ENST00000569732 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
CNOT1-218ENST00000569732 CUX2O14529 1486 aa14.26□□□□□ -0.13
CNOT1-218ENST00000569732 HOXD11P31277 338 aaPredicted RBP14.21□□□□□ -0.13
CNOT1-218ENST00000569732 FOXD4L1Q9NU39 408 aa14.2□□□□□ -0.14
CNOT1-218ENST00000569732 ERCC6Q03468 1493 aa14.16□□□□□ -0.14
CNOT1-218ENST00000569732 NCAPD3P42695 1498 aa14.15□□□□□ -0.14
CNOT1-218ENST00000569732 ATAD2BQ9ULI0 1458 aa14.05□□□□□ -0.16
CNOT1-218ENST00000569732 HMGXB3Q12766 1538 aa14.05□□□□□ -0.16
CNOT1-218ENST00000569732 SMARCA2P51531 1590 aa14.04□□□□□ -0.16
CNOT1-218ENST00000569732 SMARCA4P51532 1647 aa13.99□□□□□ -0.17
CNOT1-218ENST00000569732 NESP48681 1621 aa13.95□□□□□ -0.18
CNOT1-218ENST00000569732 SLC4A2P04920 1241 aa13.93□□□□□ -0.18
CNOT1-218ENST00000569732 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
CNOT1-218ENST00000569732 BAZ1BQ9UIG0 1483 aaKnown RBP13.91□□□□□ -0.18
CNOT1-218ENST00000569732 BAZ1AQ9NRL2 1556 aaPredicted RBP13.9□□□□□ -0.18
CNOT1-218ENST00000569732 LAMC3Q9Y6N6 1575 aa13.9□□□□□ -0.18
CNOT1-218ENST00000569732 PEG3Q9GZU2 1588 aa13.88□□□□□ -0.19
CNOT1-218ENST00000569732 PDS5BQ9NTI5 1447 aa13.81□□□□□ -0.2
CNOT1-218ENST00000569732 KIF21AQ7Z4S6 1674 aa13.8□□□□□ -0.2
CNOT1-218ENST00000569732 POTEDQ86YR6 584 aa13.77□□□□□ -0.21
CNOT1-218ENST00000569732 MYCNP04198 464 aaPredicted RBP13.75□□□□□ -0.21
CNOT1-218ENST00000569732 MROH2BQ7Z745 1585 aa13.72□□□□□ -0.21
CNOT1-218ENST00000569732 DCAF8L1A6NGE4 600 aa13.7□□□□□ -0.22
CNOT1-218ENST00000569732 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
CNOT1-218ENST00000569732 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
CNOT1-218ENST00000569732 CADPSQ9ULU8 1353 aa13.69□□□□□ -0.22
CNOT1-218ENST00000569732 WDR62O43379 1518 aa13.69□□□□□ -0.22
CNOT1-218ENST00000569732 ATXN8OSP0DMR3 200 aa13.67□□□□□ -0.22
CNOT1-218ENST00000569732 CEP164Q9UPV0 1460 aa13.59□□□□□ -0.23
CNOT1-218ENST00000569732 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.57□□□□□ -0.24
CNOT1-218ENST00000569732 WIZO95785 1651 aa13.54□□□□□ -0.24
CNOT1-218ENST00000569732 FANCD2Q9BXW9 1451 aa13.53□□□□□ -0.24
CNOT1-218ENST00000569732 OSCARQ8IYS5 282 aa13.52□□□□□ -0.25
CNOT1-218ENST00000569732 CFTRP13569 1480 aa13.49□□□□□ -0.25
CNOT1-218ENST00000569732 URB2Q14146 1524 aaKnown RBP13.43□□□□□ -0.26
CNOT1-218ENST00000569732 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.41□□□□□ -0.26
CNOT1-218ENST00000569732 HNRNPUL2Q1KMD3 747 aaKnown RBP13.41□□□□□ -0.26
CNOT1-218ENST00000569732 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
CNOT1-218ENST00000569732 RIMBP3CA6NJZ7 1639 aa13.39□□□□□ -0.27
CNOT1-218ENST00000569732 RIMBP3BA6NNM3 1639 aa13.39□□□□□ -0.27
CNOT1-218ENST00000569732 RIMBP3Q9UFD9 1639 aa13.39□□□□□ -0.27
CNOT1-218ENST00000569732 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
CNOT1-218ENST00000569732 U3KPZ7 1027 aaPredicted RBP13.38□□□□□ -0.27
CNOT1-218ENST00000569732 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
CNOT1-218ENST00000569732 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
CNOT1-218ENST00000569732 RSF1Q96T23 1441 aaPredicted RBP13.34□□□□□ -0.27
CNOT1-218ENST00000569732 IFT140Q96RY7 1462 aa13.34□□□□□ -0.27
CNOT1-218ENST00000569732 ARHGEF11O15085 1522 aa13.32□□□□□ -0.28
CNOT1-218ENST00000569732 ZNF608Q9ULD9 1512 aaPredicted RBP13.29□□□□□ -0.28
CNOT1-218ENST00000569732 ABCC8Q09428 1581 aa13.26□□□□□ -0.29
CNOT1-218ENST00000569732 FKBP8Q14318 412 aa13.26□□□□□ -0.29
CNOT1-218ENST00000569732 EIF4G3O43432 1585 aaKnown RBP13.25□□□□□ -0.29
CNOT1-218ENST00000569732 TOPBP1Q92547 1522 aa13.24□□□□□ -0.29
CNOT1-218ENST00000569732 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
CNOT1-218ENST00000569732 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
CNOT1-218ENST00000569732 CYB5RLQ6IPT4 315 aa13.18□□□□□ -0.3
CNOT1-218ENST00000569732 CHD1O14646 1710 aa13.18□□□□□ -0.3
CNOT1-218ENST00000569732 TARBP1Q13395 1621 aaKnown RBP13.17□□□□□ -0.3
CNOT1-218ENST00000569732 ARAP1Q96P48 1450 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms