RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 KNSTRNQ9Y448 316 aa16.39■□□□□ 0.21
COMMD4-209ENST00000564068 CHGAP10645 457 aaKnown RBP16.38■□□□□ 0.21
COMMD4-209ENST00000564068 ARID4BQ4LE39 1312 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-209ENST00000564068 PLIN1O60240 522 aa16.37■□□□□ 0.21
COMMD4-209ENST00000564068 FHOD3Q2V2M9 1422 aa16.36■□□□□ 0.21
COMMD4-209ENST00000564068 USP35Q9P2H5 1018 aa16.36■□□□□ 0.21
COMMD4-209ENST00000564068 KIF21BO75037 1637 aa16.35■□□□□ 0.21
COMMD4-209ENST00000564068 GZF1Q9H116 711 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-209ENST00000564068 CCDC184Q52MB2 194 aa16.34■□□□□ 0.21
COMMD4-209ENST00000564068 ESF1Q9H501 851 aaKnown RBP16.34■□□□□ 0.21
COMMD4-209ENST00000564068 GSE1Q14687 1217 aa16.34■□□□□ 0.21
COMMD4-209ENST00000564068 WASHC2AQ641Q2 1341 aa16.33■□□□□ 0.2
COMMD4-209ENST00000564068 PKD2Q13563 968 aa16.32■□□□□ 0.2
COMMD4-209ENST00000564068 FMN1Q68DA7 1419 aa16.32■□□□□ 0.2
COMMD4-209ENST00000564068 IGF1RP08069 1367 aa16.31■□□□□ 0.2
COMMD4-209ENST00000564068 PRKCSHP14314 528 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-209ENST00000564068 NCLP19338 710 aaKnown RBP16.3■□□□□ 0.2
COMMD4-209ENST00000564068 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
COMMD4-209ENST00000564068 PHLDB1Q86UU1 1377 aa16.29■□□□□ 0.2
COMMD4-209ENST00000564068 RRP1P56182 461 aaKnown RBP16.29■□□□□ 0.2
COMMD4-209ENST00000564068 RAD54L2Q9Y4B4 1467 aa16.28■□□□□ 0.2
COMMD4-209ENST00000564068 SLC24A1O60721 1099 aa16.27■□□□□ 0.2
COMMD4-209ENST00000564068 AQRO60306 1485 aaKnown RBP eCLIP16.27■□□□□ 0.2
COMMD4-209ENST00000564068 L1TD1Q5T7N2 865 aaKnown RBP16.27■□□□□ 0.2
COMMD4-209ENST00000564068 TNNT2P45379 298 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-209ENST00000564068 JPH4Q96JJ6 628 aa16.26■□□□□ 0.19
COMMD4-209ENST00000564068 PNNQ9H307 717 aaKnown RBP16.26■□□□□ 0.19
COMMD4-209ENST00000564068 RALBP1Q15311 655 aa16.26■□□□□ 0.19
COMMD4-209ENST00000564068 BRPF3Q9ULD4 1205 aa16.26■□□□□ 0.19
COMMD4-209ENST00000564068 HMGXB3Q12766 1538 aa16.25■□□□□ 0.19
COMMD4-209ENST00000564068 FGD5Q6ZNL6 1462 aa16.24■□□□□ 0.19
COMMD4-209ENST00000564068 KTN1Q86UP2 1357 aaKnown RBP16.24■□□□□ 0.19
COMMD4-209ENST00000564068 RRBP1Q9P2E9 1410 aaKnown RBP16.24■□□□□ 0.19
COMMD4-209ENST00000564068 FTSJ3Q8IY81 847 aaKnown RBP16.24■□□□□ 0.19
COMMD4-209ENST00000564068 SENP3Q9H4L4 574 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-209ENST00000564068 GOLGA6L22H0YM25 854 aa16.23■□□□□ 0.19
COMMD4-209ENST00000564068 NLRP13Q86W25 1043 aa16.23■□□□□ 0.19
COMMD4-209ENST00000564068 CRBNQ96SW2 442 aa16.23■□□□□ 0.19
COMMD4-209ENST00000564068 CFTRP13569 1480 aa16.22■□□□□ 0.19
COMMD4-209ENST00000564068 ARAP1Q96P48 1450 aa16.22■□□□□ 0.19
COMMD4-209ENST00000564068 WDR97A6NE52 1622 aa16.22■□□□□ 0.19
COMMD4-209ENST00000564068 KIF7Q2M1P5 1343 aa16.22■□□□□ 0.19
COMMD4-209ENST00000564068 CCDC18Q5T9S5 1454 aa16.21■□□□□ 0.19
COMMD4-209ENST00000564068 ST20-MTHFSA0A0A6YYL1 179 aa16.21■□□□□ 0.19
COMMD4-209ENST00000564068 NFKBIBQ15653 356 aa16.21■□□□□ 0.18
COMMD4-209ENST00000564068 CCDC7Q96M83 1385 aa16.2■□□□□ 0.18
COMMD4-209ENST00000564068 AKNAQ7Z591 1439 aa16.2■□□□□ 0.18
COMMD4-209ENST00000564068 TMF1P82094 1093 aa16.2■□□□□ 0.18
COMMD4-209ENST00000564068 PDE3BQ13370 1112 aa16.2■□□□□ 0.18
COMMD4-209ENST00000564068 MRC2Q9UBG0 1479 aa16.19■□□□□ 0.18
COMMD4-209ENST00000564068 MS4A1P11836 297 aa16.18■□□□□ 0.18
COMMD4-209ENST00000564068 HSP90AB1P08238 724 aaKnown RBP16.16■□□□□ 0.18
COMMD4-209ENST00000564068 FAM161AQ3B820 660 aa16.16■□□□□ 0.18
COMMD4-209ENST00000564068 CDCA8Q53HL2 280 aa16.16■□□□□ 0.18
COMMD4-209ENST00000564068 TPRNQ4KMQ1 711 aa16.16■□□□□ 0.18
COMMD4-209ENST00000564068 CNTLNQ9NXG0 1405 aa16.15■□□□□ 0.18
COMMD4-209ENST00000564068 RSPH6AQ9H0K4 717 aa16.15■□□□□ 0.18
COMMD4-209ENST00000564068 MYBBP1AQ9BQG0 1328 aaKnown RBP16.15■□□□□ 0.18
COMMD4-209ENST00000564068 GOLGA6L3A6NEY3 463 aa16.15■□□□□ 0.18
COMMD4-209ENST00000564068 HSCBQ8IWL3 235 aa16.14■□□□□ 0.17
COMMD4-209ENST00000564068 GOLGA2Q08379 1002 aa16.14■□□□□ 0.17
COMMD4-209ENST00000564068 CCDC146Q8IYE0 955 aa16.14■□□□□ 0.17
COMMD4-209ENST00000564068 PTMAP06454 111 aaKnown RBP16.14■□□□□ 0.17
COMMD4-209ENST00000564068 DNTTIP2Q5QJE6 756 aaKnown RBP16.13■□□□□ 0.17
COMMD4-209ENST00000564068 ROCK2O75116 1388 aaKnown RBP16.13■□□□□ 0.17
COMMD4-209ENST00000564068 VSIG10Q8N0Z9 540 aa16.13■□□□□ 0.17
COMMD4-209ENST00000564068 CARMIL2Q6F5E8 1435 aa16.13■□□□□ 0.17
COMMD4-209ENST00000564068 ARID3AQ99856 593 aa16.12■□□□□ 0.17
COMMD4-209ENST00000564068 GAPVD1Q14C86 1478 aa16.12■□□□□ 0.17
COMMD4-209ENST00000564068 MYH16Q9H6N6 1097 aa16.12■□□□□ 0.17
COMMD4-209ENST00000564068 CLUAP1Q96AJ1 413 aa16.12■□□□□ 0.17
COMMD4-209ENST00000564068 CDCA7LQ96GN5 454 aa16.11■□□□□ 0.17
COMMD4-209ENST00000564068 CENPQQ7L2Z9 268 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-209ENST00000564068 NUP155O75694 1391 aa16.11■□□□□ 0.17
COMMD4-209ENST00000564068 USP47Q96K76 1375 aa16.11■□□□□ 0.17
COMMD4-209ENST00000564068 KIF15Q9NS87 1388 aa16.11■□□□□ 0.17
COMMD4-209ENST00000564068 UACAQ9BZF9 1416 aa16.11■□□□□ 0.17
COMMD4-209ENST00000564068 LRRC9Q6ZRR7 1453 aa16.1■□□□□ 0.17
COMMD4-209ENST00000564068 CFAP53Q96M91 514 aa16.09■□□□□ 0.17
COMMD4-209ENST00000564068 FRAT2O75474 233 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-209ENST00000564068 MFAP1P55081 439 aaKnown RBP16.09■□□□□ 0.17
COMMD4-209ENST00000564068 HSP90AA2PQ14568 343 aaPredicted RBP16.08■□□□□ 0.17
COMMD4-209ENST00000564068 BACH2Q9BYV9 841 aa16.08■□□□□ 0.16
COMMD4-209ENST00000564068 CUX1P39880 1505 aa16.08■□□□□ 0.16
COMMD4-209ENST00000564068 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.16
COMMD4-209ENST00000564068 ZBTB7CA1YPR0 619 aa16.07■□□□□ 0.16
COMMD4-209ENST00000564068 PRXQ9BXM0 1461 aa16.07■□□□□ 0.16
COMMD4-209ENST00000564068 MSNP26038 577 aaKnown RBP16.06■□□□□ 0.16
COMMD4-209ENST00000564068 NBPF8Q3BBV2 869 aa16.06■□□□□ 0.16
COMMD4-209ENST00000564068 PANK3Q9H999 370 aa16.06■□□□□ 0.16
COMMD4-209ENST00000564068 SKAP1Q86WV1 359 aa16.06■□□□□ 0.16
COMMD4-209ENST00000564068 FGD6Q6ZV73 1430 aa16.06■□□□□ 0.16
COMMD4-209ENST00000564068 C11orf95C9JLR9 678 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-209ENST00000564068 MLECQ14165 292 aa16.05■□□□□ 0.16
COMMD4-209ENST00000564068 U2SURPO15042 1029 aaKnown RBP16.04■□□□□ 0.16
COMMD4-209ENST00000564068 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
COMMD4-209ENST00000564068 TOP2BQ02880 1626 aa16.03■□□□□ 0.16
COMMD4-209ENST00000564068 PLCB2Q00722 1185 aa16.03■□□□□ 0.16
COMMD4-209ENST00000564068 FOXD4L1Q9NU39 408 aa16.03■□□□□ 0.16
COMMD4-209ENST00000564068 LAMC3Q9Y6N6 1575 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms