RNA–Protein interactions for RNA: ENST00000557013.1

SAMD4A-211, Transcript of sterile alpha motif domain containing 4A, humanhuman

TSL 1 (best)

Gene SAMD4A, Length 3,637 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4A-211ENST00000557013 CARMIL1Q5VZK9 1371 aa11.18□□□□□ -0.62
SAMD4A-211ENST00000557013 NUP160Q12769 1436 aa11.17□□□□□ -0.62
SAMD4A-211ENST00000557013 ERCC6L2Q5T890 1561 aa11.17□□□□□ -0.62
SAMD4A-211ENST00000557013 PHLDB1Q86UU1 1377 aa11.16□□□□□ -0.62
SAMD4A-211ENST00000557013 ARID3CA6NKF2 412 aa11.15□□□□□ -0.62
SAMD4A-211ENST00000557013 HNRNPUQ00839 825 aaKnown RBP eCLIP11.15□□□□□ -0.63
SAMD4A-211ENST00000557013 TONSLQ96HA7 1378 aa11.14□□□□□ -0.63
SAMD4A-211ENST00000557013 CUL7Q14999 1698 aa11.14□□□□□ -0.63
SAMD4A-211ENST00000557013 JPH4Q96JJ6 628 aa11.14□□□□□ -0.63
SAMD4A-211ENST00000557013 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
SAMD4A-211ENST00000557013 B4GALNT3Q6L9W6 998 aa11.13□□□□□ -0.63
SAMD4A-211ENST00000557013 LRRC9Q6ZRR7 1453 aa11.12□□□□□ -0.63
SAMD4A-211ENST00000557013 PRG4Q92954 1404 aaPredicted RBP11.12□□□□□ -0.63
SAMD4A-211ENST00000557013 TIAM1Q13009 1591 aa11.11□□□□□ -0.63
SAMD4A-211ENST00000557013 KIAA0586Q9BVV6 1533 aa11.07□□□□□ -0.64
SAMD4A-211ENST00000557013 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
SAMD4A-211ENST00000557013 SHROOM2Q13796 1616 aa11.06□□□□□ -0.64
SAMD4A-211ENST00000557013 MAP3K1Q13233 1512 aa11.05□□□□□ -0.64
SAMD4A-211ENST00000557013 IPO9Q96P70 1041 aaKnown RBP11.04□□□□□ -0.64
SAMD4A-211ENST00000557013 IQGAP2Q13576 1575 aa11.03□□□□□ -0.64
SAMD4A-211ENST00000557013 FHOD3Q2V2M9 1422 aa11.03□□□□□ -0.64
SAMD4A-211ENST00000557013 ARID4BQ4LE39 1312 aaPredicted RBP11.02□□□□□ -0.64
SAMD4A-211ENST00000557013 PPP4R2Q9NY27 417 aa11.02□□□□□ -0.65
SAMD4A-211ENST00000557013 NAP1L5Q96NT1 182 aaPredicted RBP11.01□□□□□ -0.65
SAMD4A-211ENST00000557013 FAM9BQ8IZU0 186 aa11.01□□□□□ -0.65
SAMD4A-211ENST00000557013 HSP90AA2PQ14568 343 aaPredicted RBP10.99□□□□□ -0.65
SAMD4A-211ENST00000557013 HSPA5P11021 654 aaKnown RBP10.99□□□□□ -0.65
SAMD4A-211ENST00000557013 MTUS2Q5JR59 1369 aa10.99□□□□□ -0.65
SAMD4A-211ENST00000557013 CCDC18Q5T9S5 1454 aa10.99□□□□□ -0.65
SAMD4A-211ENST00000557013 PDE4CQ08493 712 aa10.98□□□□□ -0.65
SAMD4A-211ENST00000557013 ARXQ96QS3 562 aa10.98□□□□□ -0.65
SAMD4A-211ENST00000557013 CARMIL2Q6F5E8 1435 aa10.98□□□□□ -0.65
SAMD4A-211ENST00000557013 PCF11O94913 1555 aaKnown RBP10.98□□□□□ -0.65
SAMD4A-211ENST00000557013 CHIC2Q9UKJ5 165 aa10.97□□□□□ -0.65
SAMD4A-211ENST00000557013 PTPRGP23470 1445 aa10.97□□□□□ -0.65
SAMD4A-211ENST00000557013 CTTNBP2Q8WZ74 1663 aa10.97□□□□□ -0.65
SAMD4A-211ENST00000557013 CNGB1Q14028 1251 aaPredicted RBP10.97□□□□□ -0.65
SAMD4A-211ENST00000557013 RRP7BPQ9NSQ0 103 aa10.97□□□□□ -0.65
SAMD4A-211ENST00000557013 WASHC2AQ641Q2 1341 aa10.96□□□□□ -0.65
SAMD4A-211ENST00000557013 FGD6Q6ZV73 1430 aa10.96□□□□□ -0.65
SAMD4A-211ENST00000557013 EIF4G2P78344 907 aaKnown RBP eCLIP10.96□□□□□ -0.65
SAMD4A-211ENST00000557013 UACAQ9BZF9 1416 aa10.96□□□□□ -0.66
SAMD4A-211ENST00000557013 CCDC184Q52MB2 194 aa10.96□□□□□ -0.66
SAMD4A-211ENST00000557013 MRS2Q9HD23 443 aa10.96□□□□□ -0.66
SAMD4A-211ENST00000557013 RBM10P98175 930 aaKnown RBP10.95□□□□□ -0.66
SAMD4A-211ENST00000557013 DISP1Q96F81 1524 aa10.95□□□□□ -0.66
SAMD4A-211ENST00000557013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.94□□□□□ -0.66
SAMD4A-211ENST00000557013 GSE1Q14687 1217 aa10.94□□□□□ -0.66
SAMD4A-211ENST00000557013 CASKIN1Q8WXD9 1431 aa10.93□□□□□ -0.66
SAMD4A-211ENST00000557013 PTPRKQ15262 1439 aa10.93□□□□□ -0.66
SAMD4A-211ENST00000557013 FYCO1Q9BQS8 1478 aa10.92□□□□□ -0.66
SAMD4A-211ENST00000557013 ADCY10Q96PN6 1610 aa10.92□□□□□ -0.66
SAMD4A-211ENST00000557013 HFM1A2PYH4 1435 aa10.92□□□□□ -0.66
SAMD4A-211ENST00000557013 CFAP43Q8NDM7 1665 aa10.92□□□□□ -0.66
SAMD4A-211ENST00000557013 HSP90AA1P07900 732 aaKnown RBP10.92□□□□□ -0.66
SAMD4A-211ENST00000557013 KIAA0556O60303 1618 aa10.92□□□□□ -0.66
SAMD4A-211ENST00000557013 UGGT2Q9NYU1 1516 aa10.91□□□□□ -0.66
SAMD4A-211ENST00000557013 PPM1GO15355 546 aaPredicted RBP10.9□□□□□ -0.66
SAMD4A-211ENST00000557013 PLPPR3Q6T4P5 718 aa10.9□□□□□ -0.67
SAMD4A-211ENST00000557013 POLR3GLQ9BT43 218 aa10.9□□□□□ -0.67
SAMD4A-211ENST00000557013 PRKRIP1Q9H875 184 aaPredicted RBP10.9□□□□□ -0.67
SAMD4A-211ENST00000557013 NAIPQ13075 1403 aa10.89□□□□□ -0.67
SAMD4A-211ENST00000557013 FMN1Q68DA7 1419 aa10.89□□□□□ -0.67
SAMD4A-211ENST00000557013 FOXD1Q16676 465 aa10.89□□□□□ -0.67
SAMD4A-211ENST00000557013 FRAT1Q92837 279 aaPredicted RBP10.89□□□□□ -0.67
SAMD4A-211ENST00000557013 C11orf95C9JLR9 678 aaPredicted RBP10.89□□□□□ -0.67
SAMD4A-211ENST00000557013 FAM69CQ0P6D2 419 aa10.88□□□□□ -0.67
SAMD4A-211ENST00000557013 USP35Q9P2H5 1018 aa10.88□□□□□ -0.67
SAMD4A-211ENST00000557013 PLB1Q6P1J6 1458 aa10.88□□□□□ -0.67
SAMD4A-211ENST00000557013 L3MBTL2Q969R5 705 aa10.88□□□□□ -0.67
SAMD4A-211ENST00000557013 BCL11BQ9C0K0 894 aaPredicted RBP10.87□□□□□ -0.67
SAMD4A-211ENST00000557013 SENP3-EIF4A1A0A087X0R7 540 aa10.87□□□□□ -0.67
SAMD4A-211ENST00000557013 PTPN23Q9H3S7 1636 aa10.87□□□□□ -0.67
SAMD4A-211ENST00000557013 CNTLNQ9NXG0 1405 aa10.87□□□□□ -0.67
SAMD4A-211ENST00000557013 ZBED9Q6R2W3 1325 aa10.86□□□□□ -0.67
SAMD4A-211ENST00000557013 MYOM3Q5VTT5 1437 aa10.85□□□□□ -0.67
SAMD4A-211ENST00000557013 NCOA2Q15596 1464 aa10.85□□□□□ -0.67
SAMD4A-211ENST00000557013 MPHOSPH9Q99550 1183 aa10.85□□□□□ -0.67
SAMD4A-211ENST00000557013 EFCAB5A4FU69 1503 aa10.85□□□□□ -0.67
SAMD4A-211ENST00000557013 FGD1P98174 961 aa10.84□□□□□ -0.67
SAMD4A-211ENST00000557013 CCDC7Q96M83 1385 aa10.84□□□□□ -0.67
SAMD4A-211ENST00000557013 FAM43AQ8N2R8 423 aa10.84□□□□□ -0.67
SAMD4A-211ENST00000557013 ABCC2Q92887 1545 aa10.84□□□□□ -0.67
SAMD4A-211ENST00000557013 PDIA4P13667 645 aaKnown RBP10.83□□□□□ -0.68
SAMD4A-211ENST00000557013 PNNQ9H307 717 aaKnown RBP10.83□□□□□ -0.68
SAMD4A-211ENST00000557013 AAMPQ13685 434 aa10.83□□□□□ -0.68
SAMD4A-211ENST00000557013 WASHC2CQ9Y4E1 1318 aa10.83□□□□□ -0.68
SAMD4A-211ENST00000557013 TSPOAP1O95153 1857 aa10.82□□□□□ -0.68
SAMD4A-211ENST00000557013 SLC4A3P48751 1232 aa10.82□□□□□ -0.68
SAMD4A-211ENST00000557013 KIF13AQ9H1H9 1805 aa10.82□□□□□ -0.68
SAMD4A-211ENST00000557013 ASXL2Q76L83 1435 aa10.82□□□□□ -0.68
SAMD4A-211ENST00000557013 ZNF326Q5BKZ1 582 aaKnown RBP10.81□□□□□ -0.68
SAMD4A-211ENST00000557013 KDM5BQ9UGL1 1544 aa10.81□□□□□ -0.68
SAMD4A-211ENST00000557013 NBPF8Q3BBV2 869 aa10.8□□□□□ -0.68
SAMD4A-211ENST00000557013 KIF7Q2M1P5 1343 aa10.8□□□□□ -0.68
SAMD4A-211ENST00000557013 ABCC10Q5T3U5 1492 aa10.79□□□□□ -0.68
SAMD4A-211ENST00000557013 ZCCHC11Q5TAX3 1644 aaKnown RBP10.79□□□□□ -0.68
SAMD4A-211ENST00000557013 SAMD9Q5K651 1589 aa10.79□□□□□ -0.68
SAMD4A-211ENST00000557013 NFKBIBQ15653 356 aa10.79□□□□□ -0.68
SAMD4A-211ENST00000557013 ARID3AQ99856 593 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms