RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 ANP32BQ92688 251 aaKnown RBP13.3□□□□□ -0.28
SMARCC2-209ENST00000550164 NUP155O75694 1391 aa13.29□□□□□ -0.28
SMARCC2-209ENST00000550164 ST20-MTHFSA0A0A6YYL1 179 aa13.29□□□□□ -0.28
SMARCC2-209ENST00000550164 PDE4AP27815 886 aa13.29□□□□□ -0.28
SMARCC2-209ENST00000550164 TMF1P82094 1093 aa13.29□□□□□ -0.28
SMARCC2-209ENST00000550164 PLIN1O60240 522 aa13.29□□□□□ -0.28
SMARCC2-209ENST00000550164 SENP3Q9H4L4 574 aaPredicted RBP13.28□□□□□ -0.28
SMARCC2-209ENST00000550164 CNTLNQ9NXG0 1405 aa13.28□□□□□ -0.28
SMARCC2-209ENST00000550164 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
SMARCC2-209ENST00000550164 NLRP13Q86W25 1043 aa13.28□□□□□ -0.28
SMARCC2-209ENST00000550164 PAK3O75914 559 aaPredicted RBP13.27□□□□□ -0.28
SMARCC2-209ENST00000550164 TNNT2P45379 298 aaPredicted RBP13.27□□□□□ -0.28
SMARCC2-209ENST00000550164 CDCA8Q53HL2 280 aa13.27□□□□□ -0.28
SMARCC2-209ENST00000550164 ROCK2O75116 1388 aaKnown RBP13.27□□□□□ -0.29
SMARCC2-209ENST00000550164 TOP2BQ02880 1626 aa13.26□□□□□ -0.29
SMARCC2-209ENST00000550164 SLC4A3P48751 1232 aa13.26□□□□□ -0.29
SMARCC2-209ENST00000550164 RRP1P56182 461 aaKnown RBP13.26□□□□□ -0.29
SMARCC2-209ENST00000550164 USP47Q96K76 1375 aa13.25□□□□□ -0.29
SMARCC2-209ENST00000550164 GLIPR1L2Q4G1C9 344 aa13.25□□□□□ -0.29
SMARCC2-209ENST00000550164 MYOM3Q5VTT5 1437 aa13.24□□□□□ -0.29
SMARCC2-209ENST00000550164 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
SMARCC2-209ENST00000550164 SLC24A1O60721 1099 aa13.23□□□□□ -0.29
SMARCC2-209ENST00000550164 TIAM1Q13009 1591 aa13.23□□□□□ -0.29
SMARCC2-209ENST00000550164 RAD54L2Q9Y4B4 1467 aa13.23□□□□□ -0.29
SMARCC2-209ENST00000550164 KIF15Q9NS87 1388 aa13.22□□□□□ -0.29
SMARCC2-209ENST00000550164 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
SMARCC2-209ENST00000550164 SPRYD3Q8NCJ5 442 aa13.22□□□□□ -0.29
SMARCC2-209ENST00000550164 SLKQ9H2G2 1235 aaPredicted RBP13.22□□□□□ -0.29
SMARCC2-209ENST00000550164 ZNF644Q9H582 1327 aaPredicted RBP13.21□□□□□ -0.29
SMARCC2-209ENST00000550164 ANKRD30AQ9BXX3 1397 aa13.21□□□□□ -0.29
SMARCC2-209ENST00000550164 FTSJ3Q8IY81 847 aaKnown RBP13.21□□□□□ -0.29
SMARCC2-209ENST00000550164 CUX1P39880 1505 aa13.21□□□□□ -0.29
SMARCC2-209ENST00000550164 AKNAQ7Z591 1439 aa13.21□□□□□ -0.3
SMARCC2-209ENST00000550164 CASKIN1Q8WXD9 1431 aa13.21□□□□□ -0.3
SMARCC2-209ENST00000550164 NBPF8Q3BBV2 869 aa13.2□□□□□ -0.3
SMARCC2-209ENST00000550164 FANCD2Q9BXW9 1451 aa13.2□□□□□ -0.3
SMARCC2-209ENST00000550164 TRIM44Q96DX7 344 aaPredicted RBP13.2□□□□□ -0.3
SMARCC2-209ENST00000550164 CRBNQ96SW2 442 aa13.2□□□□□ -0.3
SMARCC2-209ENST00000550164 NCOA2Q15596 1464 aa13.19□□□□□ -0.3
SMARCC2-209ENST00000550164 BICRAQ9NZM4 1560 aa13.19□□□□□ -0.3
SMARCC2-209ENST00000550164 USP35Q9P2H5 1018 aa13.18□□□□□ -0.3
SMARCC2-209ENST00000550164 NAP1L5Q96NT1 182 aaPredicted RBP13.18□□□□□ -0.3
SMARCC2-209ENST00000550164 CFAP53Q96M91 514 aa13.17□□□□□ -0.3
SMARCC2-209ENST00000550164 HNRNPMP52272 730 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMARCC2-209ENST00000550164 CCDC146Q8IYE0 955 aa13.17□□□□□ -0.3
SMARCC2-209ENST00000550164 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
SMARCC2-209ENST00000550164 HFM1A2PYH4 1435 aa13.16□□□□□ -0.3
SMARCC2-209ENST00000550164 C11orf95C9JLR9 678 aaPredicted RBP13.16□□□□□ -0.3
SMARCC2-209ENST00000550164 PANK3Q9H999 370 aa13.16□□□□□ -0.3
SMARCC2-209ENST00000550164 CFTRP13569 1480 aa13.15□□□□□ -0.3
SMARCC2-209ENST00000550164 NCAPD3P42695 1498 aa13.15□□□□□ -0.3
SMARCC2-209ENST00000550164 FYCO1Q9BQS8 1478 aa13.15□□□□□ -0.3
SMARCC2-209ENST00000550164 GSE1Q14687 1217 aa13.14□□□□□ -0.31
SMARCC2-209ENST00000550164 GZF1Q9H116 711 aaPredicted RBP13.14□□□□□ -0.31
SMARCC2-209ENST00000550164 MAPKBP1O60336 1514 aa13.13□□□□□ -0.31
SMARCC2-209ENST00000550164 MS4A1P11836 297 aa13.13□□□□□ -0.31
SMARCC2-209ENST00000550164 CDCA7LQ96GN5 454 aa13.13□□□□□ -0.31
SMARCC2-209ENST00000550164 STAG3Q9UJ98 1225 aa13.12□□□□□ -0.31
SMARCC2-209ENST00000550164 NCLP19338 710 aaKnown RBP13.12□□□□□ -0.31
SMARCC2-209ENST00000550164 MYH16Q9H6N6 1097 aa13.11□□□□□ -0.31
SMARCC2-209ENST00000550164 NAIPQ13075 1403 aa13.11□□□□□ -0.31
SMARCC2-209ENST00000550164 PDS5BQ9NTI5 1447 aa13.11□□□□□ -0.31
SMARCC2-209ENST00000550164 FAM161AQ3B820 660 aa13.11□□□□□ -0.31
SMARCC2-209ENST00000550164 U2SURPO15042 1029 aaKnown RBP13.1□□□□□ -0.31
SMARCC2-209ENST00000550164 CENPQQ7L2Z9 268 aaPredicted RBP13.1□□□□□ -0.31
SMARCC2-209ENST00000550164 IL27Q8NEV9 243 aa13.1□□□□□ -0.31
SMARCC2-209ENST00000550164 GOLGA6L22H0YM25 854 aa13.1□□□□□ -0.31
SMARCC2-209ENST00000550164 L1TD1Q5T7N2 865 aaKnown RBP13.1□□□□□ -0.31
SMARCC2-209ENST00000550164 PNISRQ8TF01 805 aaKnown RBP13.1□□□□□ -0.31
SMARCC2-209ENST00000550164 CLUAP1Q96AJ1 413 aa13.1□□□□□ -0.31
SMARCC2-209ENST00000550164 MORC1Q86VD1 984 aa13.09□□□□□ -0.31
SMARCC2-209ENST00000550164 MAPK8IP3Q9UPT6 1336 aa13.08□□□□□ -0.32
SMARCC2-209ENST00000550164 HSP90AB1P08238 724 aaKnown RBP13.07□□□□□ -0.32
SMARCC2-209ENST00000550164 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
SMARCC2-209ENST00000550164 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMARCC2-209ENST00000550164 HSCBQ8IWL3 235 aa13.07□□□□□ -0.32
SMARCC2-209ENST00000550164 SMG6Q86US8 1419 aaKnown RBP13.06□□□□□ -0.32
SMARCC2-209ENST00000550164 NFKBIBQ15653 356 aa13.06□□□□□ -0.32
SMARCC2-209ENST00000550164 PCF11O94913 1555 aaKnown RBP13.05□□□□□ -0.32
SMARCC2-209ENST00000550164 ANO8Q9HCE9 1232 aaPredicted RBP13.05□□□□□ -0.32
SMARCC2-209ENST00000550164 CCDC144AA2RUR9 1427 aa13.05□□□□□ -0.32
SMARCC2-209ENST00000550164 ARID4BQ4LE39 1312 aaPredicted RBP13.04□□□□□ -0.32
SMARCC2-209ENST00000550164 APAF1O14727 1248 aa13.04□□□□□ -0.32
SMARCC2-209ENST00000550164 CARMIL2Q6F5E8 1435 aa13.04□□□□□ -0.32
SMARCC2-209ENST00000550164 CENPJQ9HC77 1338 aaPredicted RBP13.04□□□□□ -0.32
SMARCC2-209ENST00000550164 BRD4O60885 1362 aaPredicted RBP13.04□□□□□ -0.32
SMARCC2-209ENST00000550164 BCL2L13Q9BXK5 485 aa13.03□□□□□ -0.32
SMARCC2-209ENST00000550164 BACH2Q9BYV9 841 aa13.03□□□□□ -0.32
SMARCC2-209ENST00000550164 RRP7AQ9Y3A4 280 aaKnown RBP13.03□□□□□ -0.32
SMARCC2-209ENST00000550164 MFAP1P55081 439 aaKnown RBP13.03□□□□□ -0.32
SMARCC2-209ENST00000550164 RWDD1Q9H446 243 aaPredicted RBP13.03□□□□□ -0.32
SMARCC2-209ENST00000550164 COG6Q9Y2V7 657 aa13.03□□□□□ -0.32
SMARCC2-209ENST00000550164 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMARCC2-209ENST00000550164 SAFB2Q14151 953 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMARCC2-209ENST00000550164 U2AF1L5P0DN76 240 aaPredicted RBP13.02□□□□□ -0.32
SMARCC2-209ENST00000550164 U2AF1Q01081 240 aaKnown RBP eCLIP13.02□□□□□ -0.32
SMARCC2-209ENST00000550164 BRPF3Q9ULD4 1205 aa13.02□□□□□ -0.32
SMARCC2-209ENST00000550164 EFCAB5A4FU69 1503 aa13.01□□□□□ -0.33
SMARCC2-209ENST00000550164 MAP3K1Q13233 1512 aa13.01□□□□□ -0.33
SMARCC2-209ENST00000550164 JPH4Q96JJ6 628 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms