RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 NISCHQ9Y2I1 1504 aa18.23■□□□□ 0.51
SMARCC2-209ENST00000550164 DCAF8L2P0C7V8 631 aa17.33■□□□□ 0.37
SMARCC2-209ENST00000550164 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
SMARCC2-209ENST00000550164 SHROOM4Q9ULL8 1493 aa17.17■□□□□ 0.34
SMARCC2-209ENST00000550164 PCGF6Q9BYE7 350 aa16.61■□□□□ 0.25
SMARCC2-209ENST00000550164 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
SMARCC2-209ENST00000550164 HRCP23327 699 aa16.24■□□□□ 0.19
SMARCC2-209ENST00000550164 FAM9AQ8IZU1 332 aaPredicted RBP16.2■□□□□ 0.18
SMARCC2-209ENST00000550164 CHIC1Q5VXU3 224 aa16.09■□□□□ 0.17
SMARCC2-209ENST00000550164 PPARGC1BQ86YN6 1023 aaKnown RBP16.04■□□□□ 0.16
SMARCC2-209ENST00000550164 LOC105371045A0A1W2PR82 267 aa15.98■□□□□ 0.15
SMARCC2-209ENST00000550164 ZEB1P37275 1124 aaPredicted RBP15.94■□□□□ 0.14
SMARCC2-209ENST00000550164 TRIM41Q8WV44 630 aa15.94■□□□□ 0.14
SMARCC2-209ENST00000550164 TTBK1Q5TCY1 1321 aaPredicted RBP15.93■□□□□ 0.14
SMARCC2-209ENST00000550164 TRIM26Q12899 539 aaPredicted RBP15.89■□□□□ 0.13
SMARCC2-209ENST00000550164 CCER1Q8TC90 406 aaPredicted RBP15.8■□□□□ 0.12
SMARCC2-209ENST00000550164 PELP1Q8IZL8 1130 aaKnown RBP15.79■□□□□ 0.12
SMARCC2-209ENST00000550164 CENPBP07199 599 aaPredicted RBP15.71■□□□□ 0.11
SMARCC2-209ENST00000550164 APLP2Q06481 763 aa15.59■□□□□ 0.09
SMARCC2-209ENST00000550164 YTHDC1Q96MU7 727 aaKnown RBP15.54■□□□□ 0.08
SMARCC2-209ENST00000550164 RANGAP1P46060 587 aaPredicted RBP15.49■□□□□ 0.07
SMARCC2-209ENST00000550164 UBTFP17480 764 aaKnown RBP15.47■□□□□ 0.07
SMARCC2-209ENST00000550164 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.44■□□□□ 0.06
SMARCC2-209ENST00000550164 MYO15BQ96JP2 1530 aa15.4■□□□□ 0.06
SMARCC2-209ENST00000550164 DIEXFQ68CQ4 756 aaKnown RBP15.3■□□□□ 0.04
SMARCC2-209ENST00000550164 ZCCHC6Q5VYS8 1495 aaKnown RBP15.27■□□□□ 0.04
SMARCC2-209ENST00000550164 DCAF1Q9Y4B6 1507 aa15.26■□□□□ 0.03
SMARCC2-209ENST00000550164 MYT1Q01538 1121 aa15.26■□□□□ 0.03
SMARCC2-209ENST00000550164 HNRNPUL2Q1KMD3 747 aaKnown RBP15.22■□□□□ 0.03
SMARCC2-209ENST00000550164 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.02
SMARCC2-209ENST00000550164 ACIN1Q9UKV3 1341 aaKnown RBP15.12■□□□□ 0.01
SMARCC2-209ENST00000550164 SCAF1Q9H7N4 1312 aaKnown RBP15.09■□□□□ 0.01
SMARCC2-209ENST00000550164 ATP1B4Q9UN42 357 aaPredicted RBP15.02■□□□□ -0
SMARCC2-209ENST00000550164 ITGAEP38570 1179 aa15□□□□□ -0.01
SMARCC2-209ENST00000550164 NEUROD1Q13562 356 aa14.98□□□□□ -0.01
SMARCC2-209ENST00000550164 NEFLP07196 543 aa14.98□□□□□ -0.01
SMARCC2-209ENST00000550164 ZNF316A6NFI3 1004 aaPredicted RBP14.95□□□□□ -0.02
SMARCC2-209ENST00000550164 ERICH6Q7L0X2 663 aa14.94□□□□□ -0.02
SMARCC2-209ENST00000550164 CCDC180Q9P1Z9 1646 aa14.93□□□□□ -0.02
SMARCC2-209ENST00000550164 ABCC9O60706 1549 aa14.84□□□□□ -0.03
SMARCC2-209ENST00000550164 SCRIBQ14160 1630 aa14.81□□□□□ -0.04
SMARCC2-209ENST00000550164 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
SMARCC2-209ENST00000550164 BCANQ96GW7 911 aa14.74□□□□□ -0.05
SMARCC2-209ENST00000550164 RSF1Q96T23 1441 aaPredicted RBP14.74□□□□□ -0.05
SMARCC2-209ENST00000550164 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
SMARCC2-209ENST00000550164 MIER1Q8N108 512 aa14.67□□□□□ -0.06
SMARCC2-209ENST00000550164 FAM50AQ14320 339 aaKnown RBP14.6□□□□□ -0.07
SMARCC2-209ENST00000550164 CNGB1Q14028 1251 aaPredicted RBP14.56□□□□□ -0.08
SMARCC2-209ENST00000550164 CEP162Q5TB80 1403 aa14.51□□□□□ -0.09
SMARCC2-209ENST00000550164 POLR3GLQ9BT43 218 aa14.51□□□□□ -0.09
SMARCC2-209ENST00000550164 ANP32CO43423 234 aa14.47□□□□□ -0.09
SMARCC2-209ENST00000550164 RB1CC1Q8TDY2 1594 aa14.45□□□□□ -0.1
SMARCC2-209ENST00000550164 FKBP8Q14318 412 aa14.45□□□□□ -0.1
SMARCC2-209ENST00000550164 DDX10Q13206 875 aaKnown RBP14.41□□□□□ -0.1
SMARCC2-209ENST00000550164 CECR2Q9BXF3 1484 aa14.41□□□□□ -0.1
SMARCC2-209ENST00000550164 CLSPNQ9HAW4 1339 aa14.41□□□□□ -0.1
SMARCC2-209ENST00000550164 CLIP1P30622 1438 aa14.39□□□□□ -0.11
SMARCC2-209ENST00000550164 P3H3Q8IVL6 736 aa14.38□□□□□ -0.11
SMARCC2-209ENST00000550164 TNIKQ9UKE5 1360 aa14.37□□□□□ -0.11
SMARCC2-209ENST00000550164 CDK11AQ9UQ88 783 aaPredicted RBP14.35□□□□□ -0.11
SMARCC2-209ENST00000550164 TRIM52Q96A61 297 aa14.34□□□□□ -0.11
SMARCC2-209ENST00000550164 GOLGA3Q08378 1498 aa14.32□□□□□ -0.12
SMARCC2-209ENST00000550164 HIRIP3Q9BW71 556 aaPredicted RBP14.3□□□□□ -0.12
SMARCC2-209ENST00000550164 SOGA1O94964 1423 aa14.3□□□□□ -0.12
SMARCC2-209ENST00000550164 EEA1Q15075 1411 aa14.29□□□□□ -0.12
SMARCC2-209ENST00000550164 MROH2BQ7Z745 1585 aa14.25□□□□□ -0.13
SMARCC2-209ENST00000550164 RTL5Q5HYW3 569 aaPredicted RBP14.25□□□□□ -0.13
SMARCC2-209ENST00000550164 SUPT16HQ9Y5B9 1047 aaKnown RBP14.25□□□□□ -0.13
SMARCC2-209ENST00000550164 HNRNPUQ00839 825 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMARCC2-209ENST00000550164 WRNQ14191 1432 aaPredicted RBP eCLIP14.23□□□□□ -0.13
SMARCC2-209ENST00000550164 CCDC88BA6NC98 1476 aa14.21□□□□□ -0.13
SMARCC2-209ENST00000550164 ABCC8Q09428 1581 aa14.2□□□□□ -0.14
SMARCC2-209ENST00000550164 DAXXQ9UER7 740 aaPredicted RBP14.2□□□□□ -0.14
SMARCC2-209ENST00000550164 TONSLQ96HA7 1378 aa14.19□□□□□ -0.14
SMARCC2-209ENST00000550164 ZNF326Q5BKZ1 582 aaKnown RBP14.19□□□□□ -0.14
SMARCC2-209ENST00000550164 IRX6P78412 446 aaPredicted RBP14.18□□□□□ -0.14
SMARCC2-209ENST00000550164 CEP164Q9UPV0 1460 aa14.17□□□□□ -0.14
SMARCC2-209ENST00000550164 ANP32EQ9BTT0 268 aa14.16□□□□□ -0.14
SMARCC2-209ENST00000550164 NACADO15069 1562 aa14.14□□□□□ -0.15
SMARCC2-209ENST00000550164 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
SMARCC2-209ENST00000550164 ARID3CA6NKF2 412 aa14.13□□□□□ -0.15
SMARCC2-209ENST00000550164 FAM9BQ8IZU0 186 aa14.12□□□□□ -0.15
SMARCC2-209ENST00000550164 WIZO95785 1651 aa14.1□□□□□ -0.15
SMARCC2-209ENST00000550164 SIN3AQ96ST3 1273 aa14.09□□□□□ -0.15
SMARCC2-209ENST00000550164 VPS8Q8N3P4 1428 aa14.06□□□□□ -0.16
SMARCC2-209ENST00000550164 CHIC2Q9UKJ5 165 aa14.05□□□□□ -0.16
SMARCC2-209ENST00000550164 KANK4Q5T7N3 995 aaPredicted RBP14.04□□□□□ -0.16
SMARCC2-209ENST00000550164 ANP32AP39687 249 aaKnown RBP14.03□□□□□ -0.16
SMARCC2-209ENST00000550164 NPM2Q86SE8 214 aaKnown RBP14.02□□□□□ -0.17
SMARCC2-209ENST00000550164 TSHZ2Q9NRE2 1034 aa14.01□□□□□ -0.17
SMARCC2-209ENST00000550164 RUSC2Q8N2Y8 1516 aa14.01□□□□□ -0.17
SMARCC2-209ENST00000550164 NBR1Q14596 966 aa14□□□□□ -0.17
SMARCC2-209ENST00000550164 MRS2Q9HD23 443 aa14□□□□□ -0.17
SMARCC2-209ENST00000550164 CCNB3Q8WWL7 1395 aa14□□□□□ -0.17
SMARCC2-209ENST00000550164 KCNH8Q96L42 1107 aa13.96□□□□□ -0.17
SMARCC2-209ENST00000550164 CCDC136Q96JN2 1154 aa13.95□□□□□ -0.18
SMARCC2-209ENST00000550164 MTUS2Q5JR59 1369 aa13.94□□□□□ -0.18
SMARCC2-209ENST00000550164 RBM19Q9Y4C8 960 aaKnown RBP13.94□□□□□ -0.18
SMARCC2-209ENST00000550164 RRP7BPQ9NSQ0 103 aa13.93□□□□□ -0.18
SMARCC2-209ENST00000550164 SALL2Q9Y467 1007 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms