RNA–Protein interactions for RNA: ENST00000545625.5

RAB6A-210, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB6A, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-210ENST00000545625 VPS8Q8N3P4 1428 aa10.71□□□□□ -0.69
RAB6A-210ENST00000545625 JPH4Q96JJ6 628 aa10.71□□□□□ -0.69
RAB6A-210ENST00000545625 PCGF6Q9BYE7 350 aa10.71□□□□□ -0.69
RAB6A-210ENST00000545625 CTTNBP2Q8WZ74 1663 aa10.7□□□□□ -0.7
RAB6A-210ENST00000545625 ARHGAP35Q9NRY4 1499 aa10.7□□□□□ -0.7
RAB6A-210ENST00000545625 TRIM26Q12899 539 aaPredicted RBP10.7□□□□□ -0.7
RAB6A-210ENST00000545625 KIAA0586Q9BVV6 1533 aa10.69□□□□□ -0.7
RAB6A-210ENST00000545625 FHOD3Q2V2M9 1422 aa10.68□□□□□ -0.7
RAB6A-210ENST00000545625 ZBTB47Q9UFB7 747 aaPredicted RBP10.68□□□□□ -0.7
RAB6A-210ENST00000545625 FBXO3Q9UK99 471 aa10.68□□□□□ -0.7
RAB6A-210ENST00000545625 IQGAP2Q13576 1575 aa10.68□□□□□ -0.7
RAB6A-210ENST00000545625 ARAP1Q96P48 1450 aa10.68□□□□□ -0.7
RAB6A-210ENST00000545625 EFCAB5A4FU69 1503 aa10.67□□□□□ -0.7
RAB6A-210ENST00000545625 CARMIL2Q6F5E8 1435 aa10.67□□□□□ -0.7
RAB6A-210ENST00000545625 KIF12Q96FN5 646 aa10.66□□□□□ -0.7
RAB6A-210ENST00000545625 NUBP1P53384 320 aa10.65□□□□□ -0.7
RAB6A-210ENST00000545625 FMN1Q68DA7 1419 aa10.65□□□□□ -0.7
RAB6A-210ENST00000545625 ARID3CA6NKF2 412 aa10.63□□□□□ -0.71
RAB6A-210ENST00000545625 PELP1Q8IZL8 1130 aaKnown RBP10.63□□□□□ -0.71
RAB6A-210ENST00000545625 NUP160Q12769 1436 aa10.63□□□□□ -0.71
RAB6A-210ENST00000545625 CEP170Q5SW79 1584 aa10.63□□□□□ -0.71
RAB6A-210ENST00000545625 MAP3K13O43283 966 aa10.62□□□□□ -0.71
RAB6A-210ENST00000545625 CHD1O14646 1710 aa10.61□□□□□ -0.71
RAB6A-210ENST00000545625 PRG4Q92954 1404 aaPredicted RBP10.6□□□□□ -0.71
RAB6A-210ENST00000545625 UGGT2Q9NYU1 1516 aa10.59□□□□□ -0.71
RAB6A-210ENST00000545625 ATMINO43313 823 aaPredicted RBP10.59□□□□□ -0.71
RAB6A-210ENST00000545625 TRPC6Q9Y210 931 aa10.59□□□□□ -0.71
RAB6A-210ENST00000545625 VASPP50552 380 aaPredicted RBP10.58□□□□□ -0.72
RAB6A-210ENST00000545625 KANK4Q5T7N3 995 aaPredicted RBP10.58□□□□□ -0.72
RAB6A-210ENST00000545625 ASTLQ6HA08 431 aaPredicted RBP10.58□□□□□ -0.72
RAB6A-210ENST00000545625 FAM212AQ96EL1 285 aa10.57□□□□□ -0.72
RAB6A-210ENST00000545625 CDK11AQ9UQ88 783 aaPredicted RBP10.57□□□□□ -0.72
RAB6A-210ENST00000545625 CASKIN1Q8WXD9 1431 aa10.57□□□□□ -0.72
RAB6A-210ENST00000545625 SAMD9Q5K651 1589 aa10.56□□□□□ -0.72
RAB6A-210ENST00000545625 PTPRGP23470 1445 aa10.56□□□□□ -0.72
RAB6A-210ENST00000545625 KLHL34Q8N239 644 aa10.55□□□□□ -0.72
RAB6A-210ENST00000545625 FYCO1Q9BQS8 1478 aa10.55□□□□□ -0.72
RAB6A-210ENST00000545625 KIAA0556O60303 1618 aa10.55□□□□□ -0.72
RAB6A-210ENST00000545625 MTUS2Q5JR59 1369 aa10.54□□□□□ -0.72
RAB6A-210ENST00000545625 DISP1Q96F81 1524 aa10.54□□□□□ -0.72
RAB6A-210ENST00000545625 ATN1P54259 1190 aaPredicted RBP10.54□□□□□ -0.72
RAB6A-210ENST00000545625 PCF11O94913 1555 aaKnown RBP10.53□□□□□ -0.72
RAB6A-210ENST00000545625 POTEB2H3BUK9 544 aa10.53□□□□□ -0.72
RAB6A-210ENST00000545625 DCAF8Q5TAQ9 597 aa10.53□□□□□ -0.72
RAB6A-210ENST00000545625 BMP2KQ9NSY1 1161 aaPredicted RBP10.53□□□□□ -0.72
RAB6A-210ENST00000545625 PCDHB13Q9Y5F0 798 aa10.53□□□□□ -0.72
RAB6A-210ENST00000545625 METRNQ9UJH8 293 aa10.52□□□□□ -0.73
RAB6A-210ENST00000545625 PLEKHD1A6NEE1 506 aa10.5□□□□□ -0.73
RAB6A-210ENST00000545625 ITGAEP38570 1179 aa10.5□□□□□ -0.73
RAB6A-210ENST00000545625 FAM50AQ14320 339 aaKnown RBP10.5□□□□□ -0.73
RAB6A-210ENST00000545625 SLC39A7Q92504 469 aa10.5□□□□□ -0.73
RAB6A-210ENST00000545625 TIAM1Q13009 1591 aa10.49□□□□□ -0.73
RAB6A-210ENST00000545625 HECW1Q76N89 1606 aa10.49□□□□□ -0.73
RAB6A-210ENST00000545625 CCDC18Q5T9S5 1454 aa10.49□□□□□ -0.73
RAB6A-210ENST00000545625 LRRC9Q6ZRR7 1453 aa10.49□□□□□ -0.73
RAB6A-210ENST00000545625 MAP3K1Q13233 1512 aa10.48□□□□□ -0.73
RAB6A-210ENST00000545625 C7P10643 843 aa10.48□□□□□ -0.73
RAB6A-210ENST00000545625 TIE1P35590 1138 aa10.48□□□□□ -0.73
RAB6A-210ENST00000545625 IFNL1Q8IU54 200 aa10.48□□□□□ -0.73
RAB6A-210ENST00000545625 PLB1Q6P1J6 1458 aa10.48□□□□□ -0.73
RAB6A-210ENST00000545625 PYGBP11216 843 aa10.47□□□□□ -0.73
RAB6A-210ENST00000545625 SGIP1Q9BQI5 828 aa10.47□□□□□ -0.73
RAB6A-210ENST00000545625 TTLL13PA6NNM8 815 aa10.46□□□□□ -0.73
RAB6A-210ENST00000545625 EPRSP07814 1512 aaKnown RBP10.46□□□□□ -0.74
RAB6A-210ENST00000545625 CLASP1Q7Z460 1538 aa10.46□□□□□ -0.74
RAB6A-210ENST00000545625 RAPGEF6Q8TEU7 1601 aa10.46□□□□□ -0.74
RAB6A-210ENST00000545625 UACAQ9BZF9 1416 aa10.45□□□□□ -0.74
RAB6A-210ENST00000545625 OTUD5Q96G74 571 aa10.45□□□□□ -0.74
RAB6A-210ENST00000545625 CDK13Q14004 1512 aaKnown RBP10.43□□□□□ -0.74
RAB6A-210ENST00000545625 KCNH8Q96L42 1107 aa10.43□□□□□ -0.74
RAB6A-210ENST00000545625 SHROOM2Q13796 1616 aa10.43□□□□□ -0.74
RAB6A-210ENST00000545625 ERCC6L2Q5T890 1561 aa10.42□□□□□ -0.74
RAB6A-210ENST00000545625 NUP153P49790 1475 aaKnown RBP10.42□□□□□ -0.74
RAB6A-210ENST00000545625 CFAP43Q8NDM7 1665 aa10.41□□□□□ -0.74
RAB6A-210ENST00000545625 IFNLR1Q8IU57 520 aaPredicted RBP10.41□□□□□ -0.74
RAB6A-210ENST00000545625 CCNB3Q8WWL7 1395 aa10.4□□□□□ -0.74
RAB6A-210ENST00000545625 ZNF777Q9ULD5 760 aaPredicted RBP10.4□□□□□ -0.74
RAB6A-210ENST00000545625 TRIM35Q9UPQ4 493 aa10.4□□□□□ -0.74
RAB6A-210ENST00000545625 EHBP1L1Q8N3D4 1523 aa10.39□□□□□ -0.75
RAB6A-210ENST00000545625 POTEFA5A3E0 1075 aa10.39□□□□□ -0.75
RAB6A-210ENST00000545625 POTEJP0CG39 1038 aa10.39□□□□□ -0.75
RAB6A-210ENST00000545625 CYB5RLQ6IPT4 315 aa10.39□□□□□ -0.75
RAB6A-210ENST00000545625 TMEM106CQ9BVX2 250 aa10.39□□□□□ -0.75
RAB6A-210ENST00000545625 ABCA8O94911 1581 aa10.39□□□□□ -0.75
RAB6A-210ENST00000545625 PHLDB1Q86UU1 1377 aa10.39□□□□□ -0.75
RAB6A-210ENST00000545625 ATP10BO94823 1461 aa10.38□□□□□ -0.75
RAB6A-210ENST00000545625 GSE1Q14687 1217 aa10.38□□□□□ -0.75
RAB6A-210ENST00000545625 PCDHB8Q9UN66 801 aa10.38□□□□□ -0.75
RAB6A-210ENST00000545625 NCOA2Q15596 1464 aa10.37□□□□□ -0.75
RAB6A-210ENST00000545625 SUPT6HQ7KZ85 1726 aaKnown RBP10.37□□□□□ -0.75
RAB6A-210ENST00000545625 CCER1Q8TC90 406 aaPredicted RBP10.37□□□□□ -0.75
RAB6A-210ENST00000545625 CFDP1Q9UEE9 299 aaPredicted RBP10.37□□□□□ -0.75
RAB6A-210ENST00000545625 TROQ12816 1431 aaPredicted RBP10.36□□□□□ -0.75
RAB6A-210ENST00000545625 ABCC2Q92887 1545 aa10.35□□□□□ -0.75
RAB6A-210ENST00000545625 SEC24BO95487 1268 aa10.35□□□□□ -0.75
RAB6A-210ENST00000545625 SPOCK2Q92563 424 aa10.35□□□□□ -0.75
RAB6A-210ENST00000545625 COLQQ9Y215 455 aaPredicted RBP10.35□□□□□ -0.75
RAB6A-210ENST00000545625 LRRIQ1Q96JM4 1722 aa10.35□□□□□ -0.75
RAB6A-210ENST00000545625 MYOM3Q5VTT5 1437 aa10.34□□□□□ -0.75
RAB6A-210ENST00000545625 RRBP1Q9P2E9 1410 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms