RNA–Protein interactions for RNA: ENST00000545625.5

RAB6A-210, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB6A, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-210ENST00000545625 AEBP2Q6ZN18 517 aaPredicted RBP21.7■■□□□ 1.06
RAB6A-210ENST00000545625 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
RAB6A-210ENST00000545625 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
RAB6A-210ENST00000545625 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
RAB6A-210ENST00000545625 FOXD1Q16676 465 aa17.22■□□□□ 0.35
RAB6A-210ENST00000545625 PLPPR3Q6T4P5 718 aa16.56■□□□□ 0.24
RAB6A-210ENST00000545625 PPP6R1Q9UPN7 881 aa16.2■□□□□ 0.18
RAB6A-210ENST00000545625 ADRA2BP18089 450 aa16.18■□□□□ 0.18
RAB6A-210ENST00000545625 PIAS4Q8N2W9 510 aaPredicted RBP16.12■□□□□ 0.17
RAB6A-210ENST00000545625 MSH5O43196 834 aa16.01■□□□□ 0.15
RAB6A-210ENST00000545625 NISCHQ9Y2I1 1504 aa15.52■□□□□ 0.07
RAB6A-210ENST00000545625 POTEDQ86YR6 584 aa15.49■□□□□ 0.07
RAB6A-210ENST00000545625 MAPK8IP2Q13387 824 aaPredicted RBP14.83□□□□□ -0.04
RAB6A-210ENST00000545625 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
RAB6A-210ENST00000545625 DMRT2Q9Y5R5 561 aa14.65□□□□□ -0.06
RAB6A-210ENST00000545625 PPP4R3CPQ6ZMV5 832 aa14.57□□□□□ -0.08
RAB6A-210ENST00000545625 CNKSR2Q8WXI2 1034 aa14.24□□□□□ -0.13
RAB6A-210ENST00000545625 HOXD11P31277 338 aaPredicted RBP14.14□□□□□ -0.15
RAB6A-210ENST00000545625 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
RAB6A-210ENST00000545625 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
RAB6A-210ENST00000545625 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
RAB6A-210ENST00000545625 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
RAB6A-210ENST00000545625 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
RAB6A-210ENST00000545625 KCNA4P22459 653 aa13.7□□□□□ -0.22
RAB6A-210ENST00000545625 RNF39Q9H2S5 420 aa13.69□□□□□ -0.22
RAB6A-210ENST00000545625 DNAJC5BQ9UF47 199 aa13.55□□□□□ -0.24
RAB6A-210ENST00000545625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.52□□□□□ -0.25
RAB6A-210ENST00000545625 CCDC180Q9P1Z9 1646 aa13.5□□□□□ -0.25
RAB6A-210ENST00000545625 C1QBPQ07021 282 aaKnown RBP13.48□□□□□ -0.25
RAB6A-210ENST00000545625 U3KPZ7 1027 aaPredicted RBP13.25□□□□□ -0.29
RAB6A-210ENST00000545625 DCAF8L2P0C7V8 631 aa13.21□□□□□ -0.29
RAB6A-210ENST00000545625 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
RAB6A-210ENST00000545625 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
RAB6A-210ENST00000545625 ABCC9O60706 1549 aa13.03□□□□□ -0.32
RAB6A-210ENST00000545625 CAPN15O75808 1086 aa13.01□□□□□ -0.33
RAB6A-210ENST00000545625 ZCCHC6Q5VYS8 1495 aaKnown RBP12.97□□□□□ -0.33
RAB6A-210ENST00000545625 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
RAB6A-210ENST00000545625 DSG3P32926 999 aa12.88□□□□□ -0.35
RAB6A-210ENST00000545625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.85□□□□□ -0.35
RAB6A-210ENST00000545625 TRHP20396 242 aaPredicted RBP12.85□□□□□ -0.35
RAB6A-210ENST00000545625 HNRNPUL2Q1KMD3 747 aaKnown RBP12.85□□□□□ -0.35
RAB6A-210ENST00000545625 APLP2Q06481 763 aa12.82□□□□□ -0.36
RAB6A-210ENST00000545625 SHROOM4Q9ULL8 1493 aa12.8□□□□□ -0.36
RAB6A-210ENST00000545625 SAMD1Q6SPF0 538 aaPredicted RBP12.79□□□□□ -0.36
RAB6A-210ENST00000545625 MYCNP04198 464 aaPredicted RBP12.77□□□□□ -0.37
RAB6A-210ENST00000545625 DCAF1Q9Y4B6 1507 aa12.76□□□□□ -0.37
RAB6A-210ENST00000545625 ABCB7O75027 752 aa12.75□□□□□ -0.37
RAB6A-210ENST00000545625 ZNF219Q9P2Y4 722 aaPredicted RBP12.75□□□□□ -0.37
RAB6A-210ENST00000545625 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
RAB6A-210ENST00000545625 NACADO15069 1562 aa12.68□□□□□ -0.38
RAB6A-210ENST00000545625 MYO15BQ96JP2 1530 aa12.63□□□□□ -0.39
RAB6A-210ENST00000545625 RB1CC1Q8TDY2 1594 aa12.62□□□□□ -0.39
RAB6A-210ENST00000545625 ZBTB22O15209 634 aa12.6□□□□□ -0.39
RAB6A-210ENST00000545625 ATF5Q9Y2D1 282 aaPredicted RBP12.53□□□□□ -0.4
RAB6A-210ENST00000545625 SCRIBQ14160 1630 aa12.52□□□□□ -0.4
RAB6A-210ENST00000545625 POLA2Q14181 598 aa12.51□□□□□ -0.41
RAB6A-210ENST00000545625 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
RAB6A-210ENST00000545625 SUPT5HO00267 1087 aaKnown RBP12.34□□□□□ -0.43
RAB6A-210ENST00000545625 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
RAB6A-210ENST00000545625 RBM42Q9BTD8 480 aaKnown RBP12.25□□□□□ -0.45
RAB6A-210ENST00000545625 UNC13AQ9UPW8 1703 aa12.2□□□□□ -0.46
RAB6A-210ENST00000545625 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
RAB6A-210ENST00000545625 POTEHQ6S545 545 aa12.15□□□□□ -0.46
RAB6A-210ENST00000545625 CSRNP3Q8WYN3 585 aa12.12□□□□□ -0.47
RAB6A-210ENST00000545625 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
RAB6A-210ENST00000545625 OSCARQ8IYS5 282 aa12.11□□□□□ -0.47
RAB6A-210ENST00000545625 CECR2Q9BXF3 1484 aa12.08□□□□□ -0.47
RAB6A-210ENST00000545625 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
RAB6A-210ENST00000545625 RSF1Q96T23 1441 aaPredicted RBP12.03□□□□□ -0.48
RAB6A-210ENST00000545625 BAZ1AQ9NRL2 1556 aaPredicted RBP12.01□□□□□ -0.49
RAB6A-210ENST00000545625 AKT1S1Q96B36 256 aa12□□□□□ -0.49
RAB6A-210ENST00000545625 FBLN2P98095 1184 aa11.99□□□□□ -0.49
RAB6A-210ENST00000545625 MROH2BQ7Z745 1585 aa11.99□□□□□ -0.49
RAB6A-210ENST00000545625 CHRDL2Q6WN34 429 aa11.97□□□□□ -0.49
RAB6A-210ENST00000545625 MKRN4PQ13434 485 aaPredicted RBP11.93□□□□□ -0.5
RAB6A-210ENST00000545625 SMARCA4P51532 1647 aa11.93□□□□□ -0.5
RAB6A-210ENST00000545625 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
RAB6A-210ENST00000545625 WIZO95785 1651 aa11.89□□□□□ -0.51
RAB6A-210ENST00000545625 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
RAB6A-210ENST00000545625 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
RAB6A-210ENST00000545625 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
RAB6A-210ENST00000545625 EIF4G1Q04637 1599 aaKnown RBP11.84□□□□□ -0.51
RAB6A-210ENST00000545625 PITPNM1O00562 1244 aa11.8□□□□□ -0.52
RAB6A-210ENST00000545625 SMARCA2P51531 1590 aa11.79□□□□□ -0.52
RAB6A-210ENST00000545625 ATAD2BQ9ULI0 1458 aa11.79□□□□□ -0.52
RAB6A-210ENST00000545625 BAZ1BQ9UIG0 1483 aaKnown RBP11.78□□□□□ -0.52
RAB6A-210ENST00000545625 ZNF692Q9BU19 519 aaPredicted RBP11.76□□□□□ -0.53
RAB6A-210ENST00000545625 TOP2AP11388 1531 aaKnown RBP11.76□□□□□ -0.53
RAB6A-210ENST00000545625 PIP4P2Q8N4L2 257 aa11.72□□□□□ -0.53
RAB6A-210ENST00000545625 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.53
RAB6A-210ENST00000545625 CC2D2AQ9P2K1 1620 aa11.71□□□□□ -0.54
RAB6A-210ENST00000545625 SSUH2Q9Y2M2 353 aa11.7□□□□□ -0.54
RAB6A-210ENST00000545625 NCAPD3P42695 1498 aa11.7□□□□□ -0.54
RAB6A-210ENST00000545625 CCDC88BA6NC98 1476 aa11.69□□□□□ -0.54
RAB6A-210ENST00000545625 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
RAB6A-210ENST00000545625 FXR2P51116 673 aaKnown RBP eCLIP11.65□□□□□ -0.54
RAB6A-210ENST00000545625 HMGXB3Q12766 1538 aa11.63□□□□□ -0.55
RAB6A-210ENST00000545625 SPDYE1Q8NFV5 336 aaPredicted RBP11.62□□□□□ -0.55
RAB6A-210ENST00000545625 TRIM41Q8WV44 630 aa11.61□□□□□ -0.55
RAB6A-210ENST00000545625 PRKAR2AP13861 404 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms