RNA–Protein interactions for RNA: ENST00000526631.1

CCDC90B-207, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 628 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-207ENST00000526631 SHROOM2Q13796 1616 aa13.87□□□□□ -0.19
CCDC90B-207ENST00000526631 ATN1P54259 1190 aaPredicted RBP13.86□□□□□ -0.19
CCDC90B-207ENST00000526631 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
CCDC90B-207ENST00000526631 NPM1P06748 294 aaKnown RBP eCLIP13.85□□□□□ -0.19
CCDC90B-207ENST00000526631 KIAA0586Q9BVV6 1533 aa13.84□□□□□ -0.19
CCDC90B-207ENST00000526631 PRG4Q92954 1404 aaPredicted RBP13.83□□□□□ -0.2
CCDC90B-207ENST00000526631 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.2
CCDC90B-207ENST00000526631 FAM9AQ8IZU1 332 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-207ENST00000526631 CARMIL2Q6F5E8 1435 aa13.79□□□□□ -0.2
CCDC90B-207ENST00000526631 RUSC2Q8N2Y8 1516 aa13.78□□□□□ -0.2
CCDC90B-207ENST00000526631 RAPGEF2Q9Y4G8 1499 aa13.74□□□□□ -0.21
CCDC90B-207ENST00000526631 ERCC6L2Q5T890 1561 aa13.73□□□□□ -0.21
CCDC90B-207ENST00000526631 BMP2KQ9NSY1 1161 aaPredicted RBP13.71□□□□□ -0.21
CCDC90B-207ENST00000526631 TRPC6Q9Y210 931 aa13.71□□□□□ -0.21
CCDC90B-207ENST00000526631 IQGAP2Q13576 1575 aa13.7□□□□□ -0.22
CCDC90B-207ENST00000526631 PTPRGP23470 1445 aa13.69□□□□□ -0.22
CCDC90B-207ENST00000526631 TNIKQ9UKE5 1360 aa13.69□□□□□ -0.22
CCDC90B-207ENST00000526631 COLQQ9Y215 455 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-207ENST00000526631 MMRN1Q13201 1228 aa13.66□□□□□ -0.22
CCDC90B-207ENST00000526631 CCDC61Q9Y6R9 512 aa13.66□□□□□ -0.22
CCDC90B-207ENST00000526631 EEA1Q15075 1411 aa13.64□□□□□ -0.23
CCDC90B-207ENST00000526631 GOLGA3Q08378 1498 aa13.63□□□□□ -0.23
CCDC90B-207ENST00000526631 MAPKBP1O60336 1514 aa13.63□□□□□ -0.23
CCDC90B-207ENST00000526631 ST18O60284 1047 aa13.62□□□□□ -0.23
CCDC90B-207ENST00000526631 KIF12Q96FN5 646 aa13.62□□□□□ -0.23
CCDC90B-207ENST00000526631 SPNS2Q8IVW8 549 aa13.61□□□□□ -0.23
CCDC90B-207ENST00000526631 UGGT2Q9NYU1 1516 aa13.6□□□□□ -0.23
CCDC90B-207ENST00000526631 FAM69CQ0P6D2 419 aa13.6□□□□□ -0.23
CCDC90B-207ENST00000526631 TSPYL2Q9H2G4 693 aaPredicted RBP13.6□□□□□ -0.23
CCDC90B-207ENST00000526631 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
CCDC90B-207ENST00000526631 ABCC10Q5T3U5 1492 aa13.59□□□□□ -0.23
CCDC90B-207ENST00000526631 CTTNBP2Q8WZ74 1663 aa13.59□□□□□ -0.23
CCDC90B-207ENST00000526631 UHRF1BP1LA0JNW5 1464 aa13.58□□□□□ -0.24
CCDC90B-207ENST00000526631 ADCY10Q96PN6 1610 aa13.57□□□□□ -0.24
CCDC90B-207ENST00000526631 UACAQ9BZF9 1416 aa13.57□□□□□ -0.24
CCDC90B-207ENST00000526631 PLB1Q6P1J6 1458 aa13.57□□□□□ -0.24
CCDC90B-207ENST00000526631 ABCC2Q92887 1545 aa13.57□□□□□ -0.24
CCDC90B-207ENST00000526631 TTBK1Q5TCY1 1321 aaPredicted RBP13.57□□□□□ -0.24
CCDC90B-207ENST00000526631 PRXQ9BXM0 1461 aa13.56□□□□□ -0.24
CCDC90B-207ENST00000526631 KIF13AQ9H1H9 1805 aa13.56□□□□□ -0.24
CCDC90B-207ENST00000526631 DISP1Q96F81 1524 aa13.54□□□□□ -0.24
CCDC90B-207ENST00000526631 KIAA0556O60303 1618 aa13.53□□□□□ -0.24
CCDC90B-207ENST00000526631 SPDYE4A6NLX3 237 aa13.52□□□□□ -0.25
CCDC90B-207ENST00000526631 TIE1P35590 1138 aa13.52□□□□□ -0.25
CCDC90B-207ENST00000526631 DIP2BQ9P265 1576 aa13.5□□□□□ -0.25
CCDC90B-207ENST00000526631 TTLL13PA6NNM8 815 aa13.49□□□□□ -0.25
CCDC90B-207ENST00000526631 MAP3K13O43283 966 aa13.49□□□□□ -0.25
CCDC90B-207ENST00000526631 KDM5BQ9UGL1 1544 aa13.49□□□□□ -0.25
CCDC90B-207ENST00000526631 ASXL2Q76L83 1435 aa13.47□□□□□ -0.25
CCDC90B-207ENST00000526631 GLI2P10070 1586 aa13.46□□□□□ -0.25
CCDC90B-207ENST00000526631 SEC24BO95487 1268 aa13.46□□□□□ -0.25
CCDC90B-207ENST00000526631 SLAIN1Q8ND83 568 aa13.46□□□□□ -0.25
CCDC90B-207ENST00000526631 TEX14Q8IWB6 1497 aa13.44□□□□□ -0.26
CCDC90B-207ENST00000526631 TSPOAP1O95153 1857 aa13.43□□□□□ -0.26
CCDC90B-207ENST00000526631 KDM6BO15054 1643 aa13.42□□□□□ -0.26
CCDC90B-207ENST00000526631 ZCCHC11Q5TAX3 1644 aaKnown RBP13.42□□□□□ -0.26
CCDC90B-207ENST00000526631 WDR7Q9Y4E6 1490 aa13.4□□□□□ -0.26
CCDC90B-207ENST00000526631 EPRSP07814 1512 aaKnown RBP13.39□□□□□ -0.27
CCDC90B-207ENST00000526631 ABCA8O94911 1581 aa13.39□□□□□ -0.27
CCDC90B-207ENST00000526631 KIF21BO75037 1637 aa13.39□□□□□ -0.27
CCDC90B-207ENST00000526631 IER5LQ5T953 404 aa13.37□□□□□ -0.27
CCDC90B-207ENST00000526631 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
CCDC90B-207ENST00000526631 EFCAB5A4FU69 1503 aa13.36□□□□□ -0.27
CCDC90B-207ENST00000526631 UBTFP17480 764 aaKnown RBP13.36□□□□□ -0.27
CCDC90B-207ENST00000526631 P3H3Q8IVL6 736 aa13.35□□□□□ -0.27
CCDC90B-207ENST00000526631 SAMD9Q5K651 1589 aa13.35□□□□□ -0.27
CCDC90B-207ENST00000526631 CFAP43Q8NDM7 1665 aa13.34□□□□□ -0.27
CCDC90B-207ENST00000526631 KCNH8Q96L42 1107 aa13.34□□□□□ -0.27
CCDC90B-207ENST00000526631 MAP3K4Q9Y6R4 1608 aa13.34□□□□□ -0.27
CCDC90B-207ENST00000526631 PHLDB1Q86UU1 1377 aa13.33□□□□□ -0.27
CCDC90B-207ENST00000526631 CD109Q6YHK3 1445 aa13.32□□□□□ -0.28
CCDC90B-207ENST00000526631 PLEKHD1A6NEE1 506 aa13.32□□□□□ -0.28
CCDC90B-207ENST00000526631 RAPGEF6Q8TEU7 1601 aa13.31□□□□□ -0.28
CCDC90B-207ENST00000526631 MAGI3Q5TCQ9 1506 aa13.31□□□□□ -0.28
CCDC90B-207ENST00000526631 TMEM121BQ9BXQ6 578 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-207ENST00000526631 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
CCDC90B-207ENST00000526631 MARVELD3Q96A59 401 aa13.3□□□□□ -0.28
CCDC90B-207ENST00000526631 CDK11AQ9UQ88 783 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-207ENST00000526631 RANGAP1P46060 587 aaPredicted RBP13.29□□□□□ -0.28
CCDC90B-207ENST00000526631 ATP10BO94823 1461 aa13.29□□□□□ -0.28
CCDC90B-207ENST00000526631 FMN1Q68DA7 1419 aa13.28□□□□□ -0.28
CCDC90B-207ENST00000526631 PPRC1Q5VV67 1664 aaKnown RBP13.27□□□□□ -0.29
CCDC90B-207ENST00000526631 FHOD3Q2V2M9 1422 aa13.23□□□□□ -0.29
CCDC90B-207ENST00000526631 ABCA9Q8IUA7 1624 aa13.22□□□□□ -0.29
CCDC90B-207ENST00000526631 ARID3CA6NKF2 412 aa13.22□□□□□ -0.29
CCDC90B-207ENST00000526631 KRTAP3-3Q9BYR6 98 aa13.21□□□□□ -0.29
CCDC90B-207ENST00000526631 KRTAP3-2Q9BYR7 98 aa13.21□□□□□ -0.29
CCDC90B-207ENST00000526631 ARAP3Q8WWN8 1544 aa13.2□□□□□ -0.3
CCDC90B-207ENST00000526631 ATP1B4Q9UN42 357 aaPredicted RBP13.2□□□□□ -0.3
CCDC90B-207ENST00000526631 NUP153P49790 1475 aaKnown RBP13.2□□□□□ -0.3
CCDC90B-207ENST00000526631 NEO1Q92859 1461 aa13.2□□□□□ -0.3
CCDC90B-207ENST00000526631 IRX5P78411 483 aaPredicted RBP13.19□□□□□ -0.3
CCDC90B-207ENST00000526631 HECW1Q76N89 1606 aa13.18□□□□□ -0.3
CCDC90B-207ENST00000526631 POTEB3A0JP26 581 aa13.18□□□□□ -0.3
CCDC90B-207ENST00000526631 POTEBQ6S5H4 581 aa13.18□□□□□ -0.3
CCDC90B-207ENST00000526631 CFAP74Q9C0B2 1584 aa13.18□□□□□ -0.3
CCDC90B-207ENST00000526631 PROM2Q8N271 834 aa13.16□□□□□ -0.3
CCDC90B-207ENST00000526631 SGIP1Q9BQI5 828 aa13.16□□□□□ -0.3
CCDC90B-207ENST00000526631 PCDHB13Q9Y5F0 798 aa13.16□□□□□ -0.3
CCDC90B-207ENST00000526631 PLCG2P16885 1265 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms