RNA–Protein interactions for RNA: ENST00000526631.1

CCDC90B-207, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 628 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-207ENST00000526631 AEBP2Q6ZN18 517 aaPredicted RBP29.42■■■□□ 2.3
CCDC90B-207ENST00000526631 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
CCDC90B-207ENST00000526631 SENP3Q9H4L4 574 aaPredicted RBP25.04■■□□□ 1.6
CCDC90B-207ENST00000526631 PHF23Q9BUL5 403 aaPredicted RBP24.65■■□□□ 1.54
CCDC90B-207ENST00000526631 FOXD1Q16676 465 aa23.58■■□□□ 1.37
CCDC90B-207ENST00000526631 POTEDQ86YR6 584 aa23.5■■□□□ 1.35
CCDC90B-207ENST00000526631 MSH5O43196 834 aa22.27■■□□□ 1.16
CCDC90B-207ENST00000526631 PIAS4Q8N2W9 510 aaPredicted RBP21.71■■□□□ 1.07
CCDC90B-207ENST00000526631 PPP6R1Q9UPN7 881 aa21.39■■□□□ 1.01
CCDC90B-207ENST00000526631 ADRA2BP18089 450 aa21.2■□□□□ 0.98
CCDC90B-207ENST00000526631 PLPPR3Q6T4P5 718 aa20.96■□□□□ 0.95
CCDC90B-207ENST00000526631 NISCHQ9Y2I1 1504 aa19.82■□□□□ 0.76
CCDC90B-207ENST00000526631 MAPK8IP2Q13387 824 aaPredicted RBP19.8■□□□□ 0.76
CCDC90B-207ENST00000526631 DMRT2Q9Y5R5 561 aa19.77■□□□□ 0.76
CCDC90B-207ENST00000526631 CACNB1Q02641 598 aaPredicted RBP19.71■□□□□ 0.75
CCDC90B-207ENST00000526631 SCAF1Q9H7N4 1312 aaKnown RBP19.17■□□□□ 0.66
CCDC90B-207ENST00000526631 RNF39Q9H2S5 420 aa19.03■□□□□ 0.64
CCDC90B-207ENST00000526631 DCAF8L1A6NGE4 600 aa18.9■□□□□ 0.62
CCDC90B-207ENST00000526631 HOXD11P31277 338 aaPredicted RBP18.68■□□□□ 0.58
CCDC90B-207ENST00000526631 C1QBPQ07021 282 aaKnown RBP18.6■□□□□ 0.57
CCDC90B-207ENST00000526631 PPP4R3CPQ6ZMV5 832 aa18.31■□□□□ 0.52
CCDC90B-207ENST00000526631 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
CCDC90B-207ENST00000526631 POTEHQ6S545 545 aa18.18■□□□□ 0.5
CCDC90B-207ENST00000526631 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
CCDC90B-207ENST00000526631 CNKSR2Q8WXI2 1034 aa18.13■□□□□ 0.49
CCDC90B-207ENST00000526631 CCDC180Q9P1Z9 1646 aa17.8■□□□□ 0.44
CCDC90B-207ENST00000526631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCDC90B-207ENST00000526631 DSG3P32926 999 aa17.51■□□□□ 0.39
CCDC90B-207ENST00000526631 ABCC9O60706 1549 aa17.49■□□□□ 0.39
CCDC90B-207ENST00000526631 SPINK5Q9NQ38 1064 aaPredicted RBP17.4■□□□□ 0.38
CCDC90B-207ENST00000526631 U3KPZ7 1027 aaPredicted RBP17.35■□□□□ 0.37
CCDC90B-207ENST00000526631 CAPN15O75808 1086 aa17.27■□□□□ 0.36
CCDC90B-207ENST00000526631 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
CCDC90B-207ENST00000526631 NPM3O75607 178 aaKnown RBP17.11■□□□□ 0.33
CCDC90B-207ENST00000526631 RB1CC1Q8TDY2 1594 aa16.88■□□□□ 0.29
CCDC90B-207ENST00000526631 ABCB7O75027 752 aa16.87■□□□□ 0.29
CCDC90B-207ENST00000526631 NACADO15069 1562 aa16.81■□□□□ 0.28
CCDC90B-207ENST00000526631 TRHP20396 242 aaPredicted RBP16.79■□□□□ 0.28
CCDC90B-207ENST00000526631 DCAF8L2P0C7V8 631 aa16.72■□□□□ 0.27
CCDC90B-207ENST00000526631 CHRDL2Q6WN34 429 aa16.68■□□□□ 0.26
CCDC90B-207ENST00000526631 ZNF219Q9P2Y4 722 aaPredicted RBP16.66■□□□□ 0.26
CCDC90B-207ENST00000526631 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
CCDC90B-207ENST00000526631 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
CCDC90B-207ENST00000526631 SP7Q8TDD2 431 aaPredicted RBP16.59■□□□□ 0.25
CCDC90B-207ENST00000526631 RBM42Q9BTD8 480 aaKnown RBP16.56■□□□□ 0.24
CCDC90B-207ENST00000526631 APLP2Q06481 763 aa16.48■□□□□ 0.23
CCDC90B-207ENST00000526631 DCAF1Q9Y4B6 1507 aa16.47■□□□□ 0.23
CCDC90B-207ENST00000526631 ZCCHC6Q5VYS8 1495 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-207ENST00000526631 UNC13AQ9UPW8 1703 aa16.33■□□□□ 0.21
CCDC90B-207ENST00000526631 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
CCDC90B-207ENST00000526631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.29■□□□□ 0.2
CCDC90B-207ENST00000526631 HNRNPUL2Q1KMD3 747 aaKnown RBP16.29■□□□□ 0.2
CCDC90B-207ENST00000526631 SHROOM4Q9ULL8 1493 aa16.25■□□□□ 0.19
CCDC90B-207ENST00000526631 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.19
CCDC90B-207ENST00000526631 BICRAQ9NZM4 1560 aa16.19■□□□□ 0.18
CCDC90B-207ENST00000526631 POLA2Q14181 598 aa16.15■□□□□ 0.18
CCDC90B-207ENST00000526631 PIP4P2Q8N4L2 257 aa16.13■□□□□ 0.17
CCDC90B-207ENST00000526631 SCRIBQ14160 1630 aa16.08■□□□□ 0.17
CCDC90B-207ENST00000526631 AKT1S1Q96B36 256 aa16.04■□□□□ 0.16
CCDC90B-207ENST00000526631 HAX1O00165 279 aa16■□□□□ 0.15
CCDC90B-207ENST00000526631 KCNA4P22459 653 aa15.96■□□□□ 0.15
CCDC90B-207ENST00000526631 REM2Q8IYK8 340 aaPredicted RBP15.96■□□□□ 0.15
CCDC90B-207ENST00000526631 EVX2Q03828 476 aa15.94■□□□□ 0.14
CCDC90B-207ENST00000526631 FXR2P51116 673 aaKnown RBP eCLIP15.87■□□□□ 0.13
CCDC90B-207ENST00000526631 EIF4G1Q04637 1599 aaKnown RBP15.86■□□□□ 0.13
CCDC90B-207ENST00000526631 CC2D2AQ9P2K1 1620 aa15.84■□□□□ 0.13
CCDC90B-207ENST00000526631 PITPNM1O00562 1244 aa15.83■□□□□ 0.12
CCDC90B-207ENST00000526631 CECR2Q9BXF3 1484 aa15.81■□□□□ 0.12
CCDC90B-207ENST00000526631 MYCNP04198 464 aaPredicted RBP15.75■□□□□ 0.11
CCDC90B-207ENST00000526631 OSCARQ8IYS5 282 aa15.71■□□□□ 0.11
CCDC90B-207ENST00000526631 ATF5Q9Y2D1 282 aaPredicted RBP15.65■□□□□ 0.1
CCDC90B-207ENST00000526631 ZBTB12Q9Y330 459 aaPredicted RBP15.61■□□□□ 0.09
CCDC90B-207ENST00000526631 LHX8Q68G74 356 aa15.53■□□□□ 0.08
CCDC90B-207ENST00000526631 NCAPD3P42695 1498 aa15.47■□□□□ 0.07
CCDC90B-207ENST00000526631 SMARCA2P51531 1590 aa15.47■□□□□ 0.07
CCDC90B-207ENST00000526631 BAZ1AQ9NRL2 1556 aaPredicted RBP15.45■□□□□ 0.06
CCDC90B-207ENST00000526631 SMARCA4P51532 1647 aa15.42■□□□□ 0.06
CCDC90B-207ENST00000526631 C19orf67A6NJJ6 358 aa15.4■□□□□ 0.06
CCDC90B-207ENST00000526631 GABBR2O75899 941 aa15.4■□□□□ 0.06
CCDC90B-207ENST00000526631 ATAD2BQ9ULI0 1458 aa15.39■□□□□ 0.05
CCDC90B-207ENST00000526631 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
CCDC90B-207ENST00000526631 PRKAR2AP13861 404 aaKnown RBP15.36■□□□□ 0.05
CCDC90B-207ENST00000526631 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
CCDC90B-207ENST00000526631 PEG3Q9GZU2 1588 aa15.3■□□□□ 0.04
CCDC90B-207ENST00000526631 PLSCR2Q9NRY7 297 aa15.29■□□□□ 0.04
CCDC90B-207ENST00000526631 ERCC6Q03468 1493 aa15.22■□□□□ 0.03
CCDC90B-207ENST00000526631 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
CCDC90B-207ENST00000526631 POTEIP0CG38 1075 aa15.18■□□□□ 0.02
CCDC90B-207ENST00000526631 CUX2O14529 1486 aa15.15■□□□□ 0.02
CCDC90B-207ENST00000526631 SPDYE2BA6NHP3 402 aa15.13■□□□□ 0.01
CCDC90B-207ENST00000526631 SPDYE6P0CI01 402 aa15.13■□□□□ 0.01
CCDC90B-207ENST00000526631 SPDYE2Q495Y8 402 aa15.13■□□□□ 0.01
CCDC90B-207ENST00000526631 LAMC3Q9Y6N6 1575 aa15.13■□□□□ 0.01
CCDC90B-207ENST00000526631 CLEC11AQ9Y240 323 aa15.12■□□□□ 0.01
CCDC90B-207ENST00000526631 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
CCDC90B-207ENST00000526631 PDS5BQ9NTI5 1447 aa15.09■□□□□ 0.01
CCDC90B-207ENST00000526631 SPDYE1Q8NFV5 336 aaPredicted RBP15.07■□□□□ 0
CCDC90B-207ENST00000526631 CHADLQ6NUI6 762 aa15.04■□□□□ -0
CCDC90B-207ENST00000526631 WIZO95785 1651 aa15.03■□□□□ -0
CCDC90B-207ENST00000526631 CADPSQ9ULU8 1353 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms