RNA–Protein interactions for RNA: ENST00000522297.1

POLB-212, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-212ENST00000522297 KCNH8Q96L42 1107 aa14.48□□□□□ -0.09
POLB-212ENST00000522297 EPRSP07814 1512 aaKnown RBP14.46□□□□□ -0.09
POLB-212ENST00000522297 UBTFP17480 764 aaKnown RBP14.46□□□□□ -0.09
POLB-212ENST00000522297 ABCA8O94911 1581 aa14.45□□□□□ -0.1
POLB-212ENST00000522297 GLI2P10070 1586 aa14.44□□□□□ -0.1
POLB-212ENST00000522297 ZCCHC11Q5TAX3 1644 aaKnown RBP14.43□□□□□ -0.1
POLB-212ENST00000522297 VASPP50552 380 aaPredicted RBP14.42□□□□□ -0.1
POLB-212ENST00000522297 WDR7Q9Y4E6 1490 aa14.42□□□□□ -0.1
POLB-212ENST00000522297 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
POLB-212ENST00000522297 ATP10BO94823 1461 aa14.41□□□□□ -0.1
POLB-212ENST00000522297 TSPOAP1O95153 1857 aa14.4□□□□□ -0.1
POLB-212ENST00000522297 FHOD3Q2V2M9 1422 aa14.4□□□□□ -0.1
POLB-212ENST00000522297 SAMD9Q5K651 1589 aa14.39□□□□□ -0.11
POLB-212ENST00000522297 KIF21BO75037 1637 aa14.38□□□□□ -0.11
POLB-212ENST00000522297 CD109Q6YHK3 1445 aa14.37□□□□□ -0.11
POLB-212ENST00000522297 KDM6BO15054 1643 aa14.37□□□□□ -0.11
POLB-212ENST00000522297 CHRDL2Q6WN34 429 aa14.36□□□□□ -0.11
POLB-212ENST00000522297 COL17A1Q9UMD9 1497 aaPredicted RBP14.36□□□□□ -0.11
POLB-212ENST00000522297 TEX14Q8IWB6 1497 aa14.33□□□□□ -0.12
POLB-212ENST00000522297 MAP3K4Q9Y6R4 1608 aa14.33□□□□□ -0.12
POLB-212ENST00000522297 PPRC1Q5VV67 1664 aaKnown RBP14.33□□□□□ -0.12
POLB-212ENST00000522297 PLEKHD1A6NEE1 506 aa14.32□□□□□ -0.12
POLB-212ENST00000522297 NUP153P49790 1475 aaKnown RBP14.31□□□□□ -0.12
POLB-212ENST00000522297 ATP1B4Q9UN42 357 aaPredicted RBP14.31□□□□□ -0.12
POLB-212ENST00000522297 RAPGEF6Q8TEU7 1601 aa14.3□□□□□ -0.12
POLB-212ENST00000522297 MIER1Q8N108 512 aa14.3□□□□□ -0.12
POLB-212ENST00000522297 MAGI3Q5TCQ9 1506 aa14.3□□□□□ -0.12
POLB-212ENST00000522297 EFCAB5A4FU69 1503 aa14.29□□□□□ -0.12
POLB-212ENST00000522297 FXR2P51116 673 aaKnown RBP eCLIP14.28□□□□□ -0.12
POLB-212ENST00000522297 PLCD3Q8N3E9 789 aa14.28□□□□□ -0.12
POLB-212ENST00000522297 HECW2Q9P2P5 1572 aa14.27□□□□□ -0.12
POLB-212ENST00000522297 ARHGAP35Q9NRY4 1499 aa14.26□□□□□ -0.13
POLB-212ENST00000522297 PLEKHG5O94827 1062 aa14.25□□□□□ -0.13
POLB-212ENST00000522297 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
POLB-212ENST00000522297 IFNLR1Q8IU57 520 aaPredicted RBP14.24□□□□□ -0.13
POLB-212ENST00000522297 ADGRL1O94910 1474 aa14.24□□□□□ -0.13
POLB-212ENST00000522297 FMN1Q68DA7 1419 aa14.24□□□□□ -0.13
POLB-212ENST00000522297 CFAP43Q8NDM7 1665 aa14.23□□□□□ -0.13
POLB-212ENST00000522297 RAPGEF3O95398 923 aa14.22□□□□□ -0.13
POLB-212ENST00000522297 PHLDB1Q86UU1 1377 aa14.21□□□□□ -0.14
POLB-212ENST00000522297 ABCA9Q8IUA7 1624 aa14.19□□□□□ -0.14
POLB-212ENST00000522297 PIP4P2Q8N4L2 257 aa14.19□□□□□ -0.14
POLB-212ENST00000522297 CDK11AQ9UQ88 783 aaPredicted RBP14.19□□□□□ -0.14
POLB-212ENST00000522297 CDK13Q14004 1512 aaKnown RBP14.19□□□□□ -0.14
POLB-212ENST00000522297 ARAP3Q8WWN8 1544 aa14.19□□□□□ -0.14
POLB-212ENST00000522297 FBXO41Q8TF61 875 aa14.17□□□□□ -0.14
POLB-212ENST00000522297 ZBTB47Q9UFB7 747 aaPredicted RBP14.17□□□□□ -0.14
POLB-212ENST00000522297 NEO1Q92859 1461 aa14.15□□□□□ -0.14
POLB-212ENST00000522297 PRKAR2AP13861 404 aaKnown RBP14.14□□□□□ -0.15
POLB-212ENST00000522297 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
POLB-212ENST00000522297 KLHL34Q8N239 644 aa14.13□□□□□ -0.15
POLB-212ENST00000522297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.13□□□□□ -0.15
POLB-212ENST00000522297 CLIP1P30622 1438 aa14.13□□□□□ -0.15
POLB-212ENST00000522297 AKNAQ7Z591 1439 aa14.13□□□□□ -0.15
POLB-212ENST00000522297 CHADLQ6NUI6 762 aa14.12□□□□□ -0.15
POLB-212ENST00000522297 FANCAO15360 1455 aa14.11□□□□□ -0.15
POLB-212ENST00000522297 PLCH2O75038 1416 aa14.1□□□□□ -0.15
POLB-212ENST00000522297 CASKIN1Q8WXD9 1431 aa14.1□□□□□ -0.15
POLB-212ENST00000522297 EFCAB2Q5VUJ9 269 aa14.1□□□□□ -0.15
POLB-212ENST00000522297 HECW1Q76N89 1606 aa14.1□□□□□ -0.15
POLB-212ENST00000522297 LOC105371045A0A1W2PR82 267 aa14.09□□□□□ -0.15
POLB-212ENST00000522297 TROQ12816 1431 aaPredicted RBP14.08□□□□□ -0.15
POLB-212ENST00000522297 DENND4BO75064 1496 aaPredicted RBP14.08□□□□□ -0.16
POLB-212ENST00000522297 TTC37Q6PGP7 1564 aa14.07□□□□□ -0.16
POLB-212ENST00000522297 SPOCK2Q92563 424 aa14.06□□□□□ -0.16
POLB-212ENST00000522297 ARID4BQ4LE39 1312 aaPredicted RBP14.06□□□□□ -0.16
POLB-212ENST00000522297 SCAPERQ9BY12 1400 aa14.06□□□□□ -0.16
POLB-212ENST00000522297 FARP1Q9Y4F1 1045 aaPredicted RBP14.05□□□□□ -0.16
POLB-212ENST00000522297 CCDC18Q5T9S5 1454 aa14.02□□□□□ -0.16
POLB-212ENST00000522297 LMTK3Q96Q04 1460 aa14.02□□□□□ -0.16
POLB-212ENST00000522297 AFAP1Q8N556 730 aa14.02□□□□□ -0.17
POLB-212ENST00000522297 PCF11O94913 1555 aaKnown RBP14.01□□□□□ -0.17
POLB-212ENST00000522297 FRMPD1Q5SYB0 1578 aa14.01□□□□□ -0.17
POLB-212ENST00000522297 FYCO1Q9BQS8 1478 aa14.01□□□□□ -0.17
POLB-212ENST00000522297 KIF14Q15058 1648 aa14.01□□□□□ -0.17
POLB-212ENST00000522297 CEP162Q5TB80 1403 aa14□□□□□ -0.17
POLB-212ENST00000522297 YEATS2Q9ULM3 1422 aa13.98□□□□□ -0.17
POLB-212ENST00000522297 LRRIQ1Q96JM4 1722 aa13.98□□□□□ -0.17
POLB-212ENST00000522297 CFAP74Q9C0B2 1584 aa13.98□□□□□ -0.17
POLB-212ENST00000522297 POGZQ7Z3K3 1410 aa13.98□□□□□ -0.17
POLB-212ENST00000522297 ARHGAP5Q13017 1502 aa13.97□□□□□ -0.17
POLB-212ENST00000522297 NUBP1P53384 320 aa13.97□□□□□ -0.17
POLB-212ENST00000522297 MAGI2Q86UL8 1455 aa13.96□□□□□ -0.17
POLB-212ENST00000522297 AMER1Q5JTC6 1135 aaPredicted RBP13.96□□□□□ -0.17
POLB-212ENST00000522297 MYT1LQ9UL68 1186 aa13.96□□□□□ -0.17
POLB-212ENST00000522297 ZNF777Q9ULD5 760 aaPredicted RBP13.96□□□□□ -0.17
POLB-212ENST00000522297 RICTORQ6R327 1708 aa13.95□□□□□ -0.18
POLB-212ENST00000522297 MLECQ14165 292 aa13.95□□□□□ -0.18
POLB-212ENST00000522297 MTUS2Q5JR59 1369 aa13.94□□□□□ -0.18
POLB-212ENST00000522297 CFDP1Q9UEE9 299 aaPredicted RBP13.93□□□□□ -0.18
POLB-212ENST00000522297 ZMYM4Q5VZL5 1548 aa13.93□□□□□ -0.18
POLB-212ENST00000522297 MYO5CQ9NQX4 1742 aa13.93□□□□□ -0.18
POLB-212ENST00000522297 ZFYVE16Q7Z3T8 1539 aa13.92□□□□□ -0.18
POLB-212ENST00000522297 HNRNPMP52272 730 aaKnown RBP eCLIP13.92□□□□□ -0.18
POLB-212ENST00000522297 ILDR2Q71H61 639 aa13.92□□□□□ -0.18
POLB-212ENST00000522297 ATP10AO60312 1499 aa13.92□□□□□ -0.18
POLB-212ENST00000522297 ZNF518AQ6AHZ1 1483 aa13.92□□□□□ -0.18
POLB-212ENST00000522297 TRAPPC8Q9Y2L5 1435 aa13.91□□□□□ -0.18
POLB-212ENST00000522297 ARHGEF40Q8TER5 1519 aa13.91□□□□□ -0.18
POLB-212ENST00000522297 ARHGEF12Q9NZN5 1544 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms