RNA–Protein interactions for RNA: ENST00000522297.1

POLB-212, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-212ENST00000522297 AEBP2Q6ZN18 517 aaPredicted RBP26.62■■□□□ 1.85
POLB-212ENST00000522297 CHIC1Q5VXU3 224 aa26.08■■□□□ 1.77
POLB-212ENST00000522297 PHF23Q9BUL5 403 aaPredicted RBP22.93■■□□□ 1.26
POLB-212ENST00000522297 SENP3Q9H4L4 574 aaPredicted RBP22.61■■□□□ 1.21
POLB-212ENST00000522297 NISCHQ9Y2I1 1504 aa21.43■■□□□ 1.02
POLB-212ENST00000522297 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
POLB-212ENST00000522297 FOXD1Q16676 465 aa20.94■□□□□ 0.94
POLB-212ENST00000522297 PPP6R1Q9UPN7 881 aa20.2■□□□□ 0.82
POLB-212ENST00000522297 ADRA2BP18089 450 aa20.16■□□□□ 0.82
POLB-212ENST00000522297 PIAS4Q8N2W9 510 aaPredicted RBP19.75■□□□□ 0.75
POLB-212ENST00000522297 MSH5O43196 834 aa19.32■□□□□ 0.68
POLB-212ENST00000522297 CCDC180Q9P1Z9 1646 aa19■□□□□ 0.63
POLB-212ENST00000522297 ABCC9O60706 1549 aa18.99■□□□□ 0.63
POLB-212ENST00000522297 PPP4R3CPQ6ZMV5 832 aa18.68■□□□□ 0.58
POLB-212ENST00000522297 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
POLB-212ENST00000522297 KCNA4P22459 653 aa18.3■□□□□ 0.52
POLB-212ENST00000522297 MAPK8IP2Q13387 824 aaPredicted RBP18.27■□□□□ 0.52
POLB-212ENST00000522297 NCBP3Q53F19 620 aaKnown RBP18.23■□□□□ 0.51
POLB-212ENST00000522297 DNAJC5BQ9UF47 199 aa18.2■□□□□ 0.5
POLB-212ENST00000522297 DCAF8L2P0C7V8 631 aa18.18■□□□□ 0.5
POLB-212ENST00000522297 CNKSR2Q8WXI2 1034 aa18.16■□□□□ 0.5
POLB-212ENST00000522297 RB1CC1Q8TDY2 1594 aa18.07■□□□□ 0.48
POLB-212ENST00000522297 DMRT2Q9Y5R5 561 aa18.05■□□□□ 0.48
POLB-212ENST00000522297 NACADO15069 1562 aa18■□□□□ 0.47
POLB-212ENST00000522297 NPM3O75607 178 aaKnown RBP17.94■□□□□ 0.46
POLB-212ENST00000522297 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
POLB-212ENST00000522297 PABPN1Q86U42 306 aaKnown RBP eCLIP17.81■□□□□ 0.44
POLB-212ENST00000522297 RNF216Q9NWF9 866 aaPredicted RBP17.81■□□□□ 0.44
POLB-212ENST00000522297 ZCCHC6Q5VYS8 1495 aaKnown RBP17.76■□□□□ 0.43
POLB-212ENST00000522297 HOXD11P31277 338 aaPredicted RBP17.72■□□□□ 0.43
POLB-212ENST00000522297 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
POLB-212ENST00000522297 BICRAQ9NZM4 1560 aa17.55■□□□□ 0.4
POLB-212ENST00000522297 POTEDQ86YR6 584 aa17.55■□□□□ 0.4
POLB-212ENST00000522297 UNC13AQ9UPW8 1703 aa17.55■□□□□ 0.4
POLB-212ENST00000522297 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
POLB-212ENST00000522297 SCRIBQ14160 1630 aa17.41■□□□□ 0.38
POLB-212ENST00000522297 SHROOM4Q9ULL8 1493 aa17.3■□□□□ 0.36
POLB-212ENST00000522297 DCAF8L1A6NGE4 600 aa17.17■□□□□ 0.34
POLB-212ENST00000522297 DNAJC5Q9H3Z4 198 aa17.13■□□□□ 0.33
POLB-212ENST00000522297 EIF4G1Q04637 1599 aaKnown RBP17.11■□□□□ 0.33
POLB-212ENST00000522297 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
POLB-212ENST00000522297 CECR2Q9BXF3 1484 aa17.07■□□□□ 0.32
POLB-212ENST00000522297 EHMT2Q96KQ7 1210 aa16.94■□□□□ 0.3
POLB-212ENST00000522297 SLC4A2P04920 1241 aa16.93■□□□□ 0.3
POLB-212ENST00000522297 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
POLB-212ENST00000522297 ZBTB22O15209 634 aa16.83■□□□□ 0.28
POLB-212ENST00000522297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.28
POLB-212ENST00000522297 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
POLB-212ENST00000522297 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
POLB-212ENST00000522297 ATAD2BQ9ULI0 1458 aa16.66■□□□□ 0.26
POLB-212ENST00000522297 SMARCA4P51532 1647 aa16.61■□□□□ 0.25
POLB-212ENST00000522297 MYCNP04198 464 aaPredicted RBP16.59■□□□□ 0.25
POLB-212ENST00000522297 U3KPZ7 1027 aaPredicted RBP16.58■□□□□ 0.24
POLB-212ENST00000522297 BAZ1AQ9NRL2 1556 aaPredicted RBP16.58■□□□□ 0.24
POLB-212ENST00000522297 SMARCA2P51531 1590 aa16.56■□□□□ 0.24
POLB-212ENST00000522297 RNF39Q9H2S5 420 aa16.56■□□□□ 0.24
POLB-212ENST00000522297 MROH2BQ7Z745 1585 aa16.53■□□□□ 0.24
POLB-212ENST00000522297 HMGXB3Q12766 1538 aa16.5■□□□□ 0.23
POLB-212ENST00000522297 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
POLB-212ENST00000522297 PEG3Q9GZU2 1588 aa16.45■□□□□ 0.22
POLB-212ENST00000522297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.43■□□□□ 0.22
POLB-212ENST00000522297 HNRNPUL2Q1KMD3 747 aaKnown RBP16.43■□□□□ 0.22
POLB-212ENST00000522297 C1QBPQ07021 282 aaKnown RBP16.38■□□□□ 0.21
POLB-212ENST00000522297 SAMD1Q6SPF0 538 aaPredicted RBP16.37■□□□□ 0.21
POLB-212ENST00000522297 NESP48681 1621 aa16.36■□□□□ 0.21
POLB-212ENST00000522297 ERCC6Q03468 1493 aa16.35■□□□□ 0.21
POLB-212ENST00000522297 CUX2O14529 1486 aa16.34■□□□□ 0.21
POLB-212ENST00000522297 ATXN8OSP0DMR3 200 aa16.31■□□□□ 0.2
POLB-212ENST00000522297 RSF1Q96T23 1441 aaPredicted RBP16.3■□□□□ 0.2
POLB-212ENST00000522297 WIZO95785 1651 aa16.28■□□□□ 0.2
POLB-212ENST00000522297 APLP2Q06481 763 aa16.24■□□□□ 0.19
POLB-212ENST00000522297 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
POLB-212ENST00000522297 LAMC3Q9Y6N6 1575 aa16.2■□□□□ 0.18
POLB-212ENST00000522297 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
POLB-212ENST00000522297 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
POLB-212ENST00000522297 ATF5Q9Y2D1 282 aaPredicted RBP16.11■□□□□ 0.17
POLB-212ENST00000522297 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
POLB-212ENST00000522297 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
POLB-212ENST00000522297 CFTRP13569 1480 aa16.04■□□□□ 0.16
POLB-212ENST00000522297 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
POLB-212ENST00000522297 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
POLB-212ENST00000522297 KIF21AQ7Z4S6 1674 aa16.03■□□□□ 0.16
POLB-212ENST00000522297 CAPN15O75808 1086 aa16■□□□□ 0.15
POLB-212ENST00000522297 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
POLB-212ENST00000522297 CCDC88BA6NC98 1476 aa15.99■□□□□ 0.15
POLB-212ENST00000522297 FANCD2Q9BXW9 1451 aa15.99■□□□□ 0.15
POLB-212ENST00000522297 MRC2Q9UBG0 1479 aa15.99■□□□□ 0.15
POLB-212ENST00000522297 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
POLB-212ENST00000522297 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
POLB-212ENST00000522297 WDR62O43379 1518 aa15.9■□□□□ 0.14
POLB-212ENST00000522297 URB2Q14146 1524 aaKnown RBP15.84■□□□□ 0.13
POLB-212ENST00000522297 SUPT5HO00267 1087 aaKnown RBP15.83■□□□□ 0.12
POLB-212ENST00000522297 DSG3P32926 999 aa15.77■□□□□ 0.12
POLB-212ENST00000522297 POLA2Q14181 598 aa15.72■□□□□ 0.11
POLB-212ENST00000522297 TOPBP1Q92547 1522 aa15.7■□□□□ 0.1
POLB-212ENST00000522297 ABCB7O75027 752 aa15.68■□□□□ 0.1
POLB-212ENST00000522297 PRDM2Q13029 1718 aa15.68■□□□□ 0.1
POLB-212ENST00000522297 ABCC8Q09428 1581 aa15.67■□□□□ 0.1
POLB-212ENST00000522297 IFT140Q96RY7 1462 aa15.65■□□□□ 0.1
POLB-212ENST00000522297 OSCARQ8IYS5 282 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms