RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 RRBP1Q9P2E9 1410 aaKnown RBP19.87■□□□□ 0.77
DEPDC1B-206ENST00000512452 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
DEPDC1B-206ENST00000512452 PTPRTO14522 1441 aa19.85■□□□□ 0.77
DEPDC1B-206ENST00000512452 PHLDB1Q86UU1 1377 aa19.85■□□□□ 0.77
DEPDC1B-206ENST00000512452 P3H3Q8IVL6 736 aa19.83■□□□□ 0.77
DEPDC1B-206ENST00000512452 POGZQ7Z3K3 1410 aa19.8■□□□□ 0.76
DEPDC1B-206ENST00000512452 PREX1Q8TCU6 1659 aa19.78■□□□□ 0.76
DEPDC1B-206ENST00000512452 DISP1Q96F81 1524 aa19.78■□□□□ 0.76
DEPDC1B-206ENST00000512452 CCDC18Q5T9S5 1454 aa19.77■□□□□ 0.76
DEPDC1B-206ENST00000512452 CCNB3Q8WWL7 1395 aa19.75■□□□□ 0.75
DEPDC1B-206ENST00000512452 KIAA0556O60303 1618 aa19.75■□□□□ 0.75
DEPDC1B-206ENST00000512452 HECW1Q76N89 1606 aa19.75■□□□□ 0.75
DEPDC1B-206ENST00000512452 HSPA1LP34931 641 aa19.74■□□□□ 0.75
DEPDC1B-206ENST00000512452 MLECQ14165 292 aa19.74■□□□□ 0.75
DEPDC1B-206ENST00000512452 FANCAO15360 1455 aa19.72■□□□□ 0.75
DEPDC1B-206ENST00000512452 TTC37Q6PGP7 1564 aa19.71■□□□□ 0.75
DEPDC1B-206ENST00000512452 FRMPD1Q5SYB0 1578 aa19.7■□□□□ 0.74
DEPDC1B-206ENST00000512452 CCER1Q8TC90 406 aaPredicted RBP19.7■□□□□ 0.74
DEPDC1B-206ENST00000512452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.7■□□□□ 0.74
DEPDC1B-206ENST00000512452 CEBPAP49715 358 aaPredicted RBP19.69■□□□□ 0.74
DEPDC1B-206ENST00000512452 EHBP1L1Q8N3D4 1523 aa19.69■□□□□ 0.74
DEPDC1B-206ENST00000512452 ARHGEF40Q8TER5 1519 aa19.69■□□□□ 0.74
DEPDC1B-206ENST00000512452 UHRF1BP1Q6BDS2 1440 aa19.68■□□□□ 0.74
DEPDC1B-206ENST00000512452 ATP1B4Q9UN42 357 aaPredicted RBP19.67■□□□□ 0.74
DEPDC1B-206ENST00000512452 FER1L4A9Z1Z3 1794 aa19.67■□□□□ 0.74
DEPDC1B-206ENST00000512452 NEO1Q92859 1461 aa19.67■□□□□ 0.74
DEPDC1B-206ENST00000512452 LRRIQ1Q96JM4 1722 aa19.66■□□□□ 0.74
DEPDC1B-206ENST00000512452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.66■□□□□ 0.74
DEPDC1B-206ENST00000512452 HNRNPUL2Q1KMD3 747 aaKnown RBP19.66■□□□□ 0.74
DEPDC1B-206ENST00000512452 MTUS2Q5JR59 1369 aa19.65■□□□□ 0.74
DEPDC1B-206ENST00000512452 SCAF1Q9H7N4 1312 aaKnown RBP19.64■□□□□ 0.73
DEPDC1B-206ENST00000512452 AKNAQ7Z591 1439 aa19.63■□□□□ 0.73
DEPDC1B-206ENST00000512452 SUPT6HQ7KZ85 1726 aaKnown RBP19.62■□□□□ 0.73
DEPDC1B-206ENST00000512452 SETD1BQ9UPS6 1966 aaKnown RBP19.59■□□□□ 0.73
DEPDC1B-206ENST00000512452 RAPGEF6Q8TEU7 1601 aa19.59■□□□□ 0.73
DEPDC1B-206ENST00000512452 PIP4K2BP78356 416 aa19.59■□□□□ 0.73
DEPDC1B-206ENST00000512452 ZNF335Q9H4Z2 1342 aaPredicted RBP19.58■□□□□ 0.73
DEPDC1B-206ENST00000512452 SENP3Q9H4L4 574 aaPredicted RBP19.58■□□□□ 0.72
DEPDC1B-206ENST00000512452 SIGLEC1Q9BZZ2 1709 aa19.57■□□□□ 0.72
DEPDC1B-206ENST00000512452 NCOA2Q15596 1464 aa19.56■□□□□ 0.72
DEPDC1B-206ENST00000512452 ABCA9Q8IUA7 1624 aa19.56■□□□□ 0.72
DEPDC1B-206ENST00000512452 CLSPNQ9HAW4 1339 aa19.55■□□□□ 0.72
DEPDC1B-206ENST00000512452 FGD6Q6ZV73 1430 aa19.55■□□□□ 0.72
DEPDC1B-206ENST00000512452 DENND4BO75064 1496 aaPredicted RBP19.54■□□□□ 0.72
DEPDC1B-206ENST00000512452 MYOM3Q5VTT5 1437 aa19.53■□□□□ 0.72
DEPDC1B-206ENST00000512452 NUP153P49790 1475 aaKnown RBP19.53■□□□□ 0.72
DEPDC1B-206ENST00000512452 ARHGEF12Q9NZN5 1544 aa19.51■□□□□ 0.71
DEPDC1B-206ENST00000512452 NCOA1Q15788 1441 aa19.51■□□□□ 0.71
DEPDC1B-206ENST00000512452 ABCA8O94911 1581 aa19.5■□□□□ 0.71
DEPDC1B-206ENST00000512452 TOM1O60784 492 aa19.5■□□□□ 0.71
DEPDC1B-206ENST00000512452 RGS17Q9UGC6 210 aaPredicted RBP19.5■□□□□ 0.71
DEPDC1B-206ENST00000512452 RICTORQ6R327 1708 aa19.49■□□□□ 0.71
DEPDC1B-206ENST00000512452 CDK13Q14004 1512 aaKnown RBP19.49■□□□□ 0.71
DEPDC1B-206ENST00000512452 ZFYVE16Q7Z3T8 1539 aa19.48■□□□□ 0.71
DEPDC1B-206ENST00000512452 CDK11AQ9UQ88 783 aaPredicted RBP19.48■□□□□ 0.71
DEPDC1B-206ENST00000512452 ARID3CA6NKF2 412 aa19.47■□□□□ 0.71
DEPDC1B-206ENST00000512452 MIA2Q96PC5 1412 aa19.46■□□□□ 0.71
DEPDC1B-206ENST00000512452 TCOF1Q13428 1488 aaKnown RBP19.46■□□□□ 0.71
DEPDC1B-206ENST00000512452 FAM50AQ14320 339 aaKnown RBP19.44■□□□□ 0.7
DEPDC1B-206ENST00000512452 SETD5Q9C0A6 1442 aa19.43■□□□□ 0.7
DEPDC1B-206ENST00000512452 PTPN23Q9H3S7 1636 aa19.42■□□□□ 0.7
DEPDC1B-206ENST00000512452 DHX57Q6P158 1386 aaKnown RBP19.42■□□□□ 0.7
DEPDC1B-206ENST00000512452 MAGI2Q86UL8 1455 aa19.41■□□□□ 0.7
DEPDC1B-206ENST00000512452 ZMYM4Q5VZL5 1548 aa19.41■□□□□ 0.7
DEPDC1B-206ENST00000512452 TROQ12816 1431 aaPredicted RBP19.41■□□□□ 0.7
DEPDC1B-206ENST00000512452 NCKAP5LQ9HCH0 1330 aa19.4■□□□□ 0.7
DEPDC1B-206ENST00000512452 ATP10BO94823 1461 aa19.38■□□□□ 0.69
DEPDC1B-206ENST00000512452 RAB3GAP2Q9H2M9 1393 aa19.38■□□□□ 0.69
DEPDC1B-206ENST00000512452 ITGAEP38570 1179 aa19.36■□□□□ 0.69
DEPDC1B-206ENST00000512452 TRAPPC8Q9Y2L5 1435 aa19.35■□□□□ 0.69
DEPDC1B-206ENST00000512452 CAMSAP1Q5T5Y3 1602 aa19.35■□□□□ 0.69
DEPDC1B-206ENST00000512452 POTEAQ6S8J7 498 aa19.34■□□□□ 0.69
DEPDC1B-206ENST00000512452 ATP10AO60312 1499 aa19.34■□□□□ 0.69
DEPDC1B-206ENST00000512452 HFM1A2PYH4 1435 aa19.33■□□□□ 0.68
DEPDC1B-206ENST00000512452 C9orf84Q5VXU9 1444 aa19.31■□□□□ 0.68
DEPDC1B-206ENST00000512452 ITSN2Q9NZM3 1697 aa19.3■□□□□ 0.68
DEPDC1B-206ENST00000512452 PKD2Q13563 968 aa19.29■□□□□ 0.68
DEPDC1B-206ENST00000512452 ACIN1Q9UKV3 1341 aaKnown RBP19.28■□□□□ 0.68
DEPDC1B-206ENST00000512452 C3P01024 1663 aa19.28■□□□□ 0.68
DEPDC1B-206ENST00000512452 PTPRKQ15262 1439 aa19.26■□□□□ 0.67
DEPDC1B-206ENST00000512452 KIF14Q15058 1648 aa19.26■□□□□ 0.67
DEPDC1B-206ENST00000512452 CFAP74Q9C0B2 1584 aa19.25■□□□□ 0.67
DEPDC1B-206ENST00000512452 PLEKHD1A6NEE1 506 aa19.25■□□□□ 0.67
DEPDC1B-206ENST00000512452 ESF1Q9H501 851 aaKnown RBP19.25■□□□□ 0.67
DEPDC1B-206ENST00000512452 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
DEPDC1B-206ENST00000512452 NAIPQ13075 1403 aa19.23■□□□□ 0.67
DEPDC1B-206ENST00000512452 DNMT1P26358 1616 aaKnown RBP19.22■□□□□ 0.67
DEPDC1B-206ENST00000512452 ROCK1Q13464 1354 aa19.22■□□□□ 0.67
DEPDC1B-206ENST00000512452 GPATCH8Q9UKJ3 1502 aaKnown RBP19.22■□□□□ 0.67
DEPDC1B-206ENST00000512452 GCC2Q8IWJ2 1684 aa19.22■□□□□ 0.67
DEPDC1B-206ENST00000512452 UPF1Q92900 1129 aaKnown RBP eCLIP19.21■□□□□ 0.67
DEPDC1B-206ENST00000512452 SETD1AO15047 1707 aaKnown RBP19.19■□□□□ 0.66
DEPDC1B-206ENST00000512452 DAPK1P53355 1430 aa19.18■□□□□ 0.66
DEPDC1B-206ENST00000512452 CPS1P31327 1500 aa19.18■□□□□ 0.66
DEPDC1B-206ENST00000512452 SCAPERQ9BY12 1400 aa19.17■□□□□ 0.66
DEPDC1B-206ENST00000512452 CAMSAP2Q08AD1 1489 aa19.16■□□□□ 0.66
DEPDC1B-206ENST00000512452 PLA2R1Q13018 1463 aa19.16■□□□□ 0.66
DEPDC1B-206ENST00000512452 CFDP1Q9UEE9 299 aaPredicted RBP19.15■□□□□ 0.66
DEPDC1B-206ENST00000512452 ABCC5O15440 1437 aa19.15■□□□□ 0.66
DEPDC1B-206ENST00000512452 ALKQ9UM73 1620 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms