RNA–Protein interactions for RNA: ENST00000504968.6

SEC24B-203, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC24B, Length 4,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-203ENST00000504968 DHX57Q6P158 1386 aaKnown RBP16.72■□□□□ 0.27
SEC24B-203ENST00000504968 SIN3AQ96ST3 1273 aa16.72■□□□□ 0.27
SEC24B-203ENST00000504968 HNRNPUQ00839 825 aaKnown RBP eCLIP16.71■□□□□ 0.27
SEC24B-203ENST00000504968 CLASP1Q7Z460 1538 aa16.71■□□□□ 0.27
SEC24B-203ENST00000504968 EPRSP07814 1512 aaKnown RBP16.7■□□□□ 0.26
SEC24B-203ENST00000504968 CDK13Q14004 1512 aaKnown RBP16.68■□□□□ 0.26
SEC24B-203ENST00000504968 EIF5BO60841 1220 aaKnown RBP16.66■□□□□ 0.26
SEC24B-203ENST00000504968 TROQ12816 1431 aaPredicted RBP16.66■□□□□ 0.26
SEC24B-203ENST00000504968 PCF11O94913 1555 aaKnown RBP16.66■□□□□ 0.26
SEC24B-203ENST00000504968 ERCC6L2Q5T890 1561 aa16.66■□□□□ 0.26
SEC24B-203ENST00000504968 RAPGEF6Q8TEU7 1601 aa16.65■□□□□ 0.26
SEC24B-203ENST00000504968 SAMD9Q5K651 1589 aa16.65■□□□□ 0.26
SEC24B-203ENST00000504968 ESF1Q9H501 851 aaKnown RBP16.64■□□□□ 0.25
SEC24B-203ENST00000504968 ATP10BO94823 1461 aa16.64■□□□□ 0.25
SEC24B-203ENST00000504968 ABCC2Q92887 1545 aa16.63■□□□□ 0.25
SEC24B-203ENST00000504968 LRRC9Q6ZRR7 1453 aa16.63■□□□□ 0.25
SEC24B-203ENST00000504968 ANP32CO43423 234 aa16.62■□□□□ 0.25
SEC24B-203ENST00000504968 NUP153P49790 1475 aaKnown RBP16.62■□□□□ 0.25
SEC24B-203ENST00000504968 FANCIQ9NVI1 1328 aa16.61■□□□□ 0.25
SEC24B-203ENST00000504968 HNRNPMP52272 730 aaKnown RBP eCLIP16.6■□□□□ 0.253e-6■■■■□ 21.2
SEC24B-203ENST00000504968 ASXL2Q76L83 1435 aa16.6■□□□□ 0.25
SEC24B-203ENST00000504968 RRP7BPQ9NSQ0 103 aa16.6■□□□□ 0.25
SEC24B-203ENST00000504968 ARID4BQ4LE39 1312 aaPredicted RBP16.59■□□□□ 0.25
SEC24B-203ENST00000504968 NPM2Q86SE8 214 aaKnown RBP16.59■□□□□ 0.25
SEC24B-203ENST00000504968 RSPH4AQ5TD94 716 aa16.57■□□□□ 0.24
SEC24B-203ENST00000504968 NOP58Q9Y2X3 529 aaKnown RBP16.57■□□□□ 0.24
SEC24B-203ENST00000504968 TIAM1Q13009 1591 aa16.57■□□□□ 0.24
SEC24B-203ENST00000504968 NCOA2Q15596 1464 aa16.56■□□□□ 0.24
SEC24B-203ENST00000504968 RTL5Q5HYW3 569 aaPredicted RBP16.56■□□□□ 0.24
SEC24B-203ENST00000504968 EHBP1L1Q8N3D4 1523 aa16.56■□□□□ 0.24
SEC24B-203ENST00000504968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.243e-8■■■□□ 14.9
SEC24B-203ENST00000504968 CD109Q6YHK3 1445 aa16.55■□□□□ 0.24
SEC24B-203ENST00000504968 RIMBP3CA6NJZ7 1639 aa16.55■□□□□ 0.24
SEC24B-203ENST00000504968 RIMBP3BA6NNM3 1639 aa16.55■□□□□ 0.24
SEC24B-203ENST00000504968 RIMBP3Q9UFD9 1639 aa16.55■□□□□ 0.24
SEC24B-203ENST00000504968 LAS1LQ9Y4W2 734 aaKnown RBP16.54■□□□□ 0.24
SEC24B-203ENST00000504968 UHRF1BP1LA0JNW5 1464 aa16.53■□□□□ 0.24
SEC24B-203ENST00000504968 SPAG9O60271 1321 aaKnown RBP16.53■□□□□ 0.24
SEC24B-203ENST00000504968 SHROOM2Q13796 1616 aa16.53■□□□□ 0.24
SEC24B-203ENST00000504968 WDR7Q9Y4E6 1490 aa16.53■□□□□ 0.24
SEC24B-203ENST00000504968 ARHGAP5Q13017 1502 aa16.52■□□□□ 0.24
SEC24B-203ENST00000504968 MYOM3Q5VTT5 1437 aa16.52■□□□□ 0.23
SEC24B-203ENST00000504968 ZNF644Q9H582 1327 aaPredicted RBP16.51■□□□□ 0.23
SEC24B-203ENST00000504968 ABCA8O94911 1581 aa16.51■□□□□ 0.23
SEC24B-203ENST00000504968 PHLDB1Q86UU1 1377 aa16.5■□□□□ 0.23
SEC24B-203ENST00000504968 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
SEC24B-203ENST00000504968 FAM9BQ8IZU0 186 aa16.5■□□□□ 0.23
SEC24B-203ENST00000504968 MAP3K1Q13233 1512 aa16.49■□□□□ 0.23
SEC24B-203ENST00000504968 KIF14Q15058 1648 aa16.48■□□□□ 0.23
SEC24B-203ENST00000504968 KDM5BQ9UGL1 1544 aa16.47■□□□□ 0.23
SEC24B-203ENST00000504968 FGD6Q6ZV73 1430 aa16.47■□□□□ 0.23
SEC24B-203ENST00000504968 PPP1R15AO75807 674 aaPredicted RBP16.46■□□□□ 0.23
SEC24B-203ENST00000504968 SUPT6HQ7KZ85 1726 aaKnown RBP16.45■□□□□ 0.22
SEC24B-203ENST00000504968 AFAP1Q8N556 730 aa16.45■□□□□ 0.22
SEC24B-203ENST00000504968 MLECQ14165 292 aa16.45■□□□□ 0.22
SEC24B-203ENST00000504968 CCDC184Q52MB2 194 aa16.44■□□□□ 0.22
SEC24B-203ENST00000504968 ANKRD30AQ9BXX3 1397 aa16.44■□□□□ 0.22
SEC24B-203ENST00000504968 RAPGEF3O95398 923 aa16.42■□□□□ 0.22
SEC24B-203ENST00000504968 SCAPERQ9BY12 1400 aa16.42■□□□□ 0.22
SEC24B-203ENST00000504968 MIA2Q96PC5 1412 aa16.41■□□□□ 0.22
SEC24B-203ENST00000504968 GGT6Q6P531 493 aa16.41■□□□□ 0.22
SEC24B-203ENST00000504968 PLEKHH2Q8IVE3 1493 aa16.41■□□□□ 0.22
SEC24B-203ENST00000504968 TIMELESSQ9UNS1 1208 aa16.4■□□□□ 0.22
SEC24B-203ENST00000504968 ZBTB47Q9UFB7 747 aaPredicted RBP16.39■□□□□ 0.21
SEC24B-203ENST00000504968 BRPF3Q9ULD4 1205 aa16.39■□□□□ 0.21
SEC24B-203ENST00000504968 PPP4R2Q9NY27 417 aa16.38■□□□□ 0.21
SEC24B-203ENST00000504968 FANCAO15360 1455 aa16.38■□□□□ 0.21
SEC24B-203ENST00000504968 PLCH2O75038 1416 aa16.38■□□□□ 0.21
SEC24B-203ENST00000504968 KIF3BO15066 747 aa16.38■□□□□ 0.21
SEC24B-203ENST00000504968 TEX14Q8IWB6 1497 aa16.37■□□□□ 0.21
SEC24B-203ENST00000504968 ZCCHC11Q5TAX3 1644 aaKnown RBP16.36■□□□□ 0.21
SEC24B-203ENST00000504968 SLC4A1APQ9BWU0 796 aaKnown RBP16.36■□□□□ 0.21
SEC24B-203ENST00000504968 ADCY10Q96PN6 1610 aa16.36■□□□□ 0.21
SEC24B-203ENST00000504968 GPATCH8Q9UKJ3 1502 aaKnown RBP16.35■□□□□ 0.21
SEC24B-203ENST00000504968 ADGRL1O94910 1474 aa16.35■□□□□ 0.21
SEC24B-203ENST00000504968 ANP32AP39687 249 aaKnown RBP16.35■□□□□ 0.21
SEC24B-203ENST00000504968 RAB3GAP2Q9H2M9 1393 aa16.35■□□□□ 0.21
SEC24B-203ENST00000504968 NEFMP07197 916 aa16.34■□□□□ 0.21
SEC24B-203ENST00000504968 AKNAQ7Z591 1439 aa16.34■□□□□ 0.21
SEC24B-203ENST00000504968 STAG3Q9UJ98 1225 aa16.33■□□□□ 0.21
SEC24B-203ENST00000504968 KANK1Q14678 1352 aa16.33■□□□□ 0.2
SEC24B-203ENST00000504968 CHGAP10645 457 aaKnown RBP16.32■□□□□ 0.2
SEC24B-203ENST00000504968 DENND4BO75064 1496 aaPredicted RBP16.31■□□□□ 0.2
SEC24B-203ENST00000504968 CFAP43Q8NDM7 1665 aa16.31■□□□□ 0.2
SEC24B-203ENST00000504968 CCER2I3L3R5 266 aa16.3■□□□□ 0.2
SEC24B-203ENST00000504968 POLR3GLQ9BT43 218 aa16.3■□□□□ 0.2
SEC24B-203ENST00000504968 ABCC10Q5T3U5 1492 aa16.29■□□□□ 0.2
SEC24B-203ENST00000504968 SETD5Q9C0A6 1442 aa16.28■□□□□ 0.2
SEC24B-203ENST00000504968 RRBP1Q9P2E9 1410 aaKnown RBP16.28■□□□□ 0.2
SEC24B-203ENST00000504968 CAMSAP2Q08AD1 1489 aa16.28■□□□□ 0.2
SEC24B-203ENST00000504968 KIF15Q9NS87 1388 aa16.28■□□□□ 0.2
SEC24B-203ENST00000504968 IPO9Q96P70 1041 aaKnown RBP16.27■□□□□ 0.2
SEC24B-203ENST00000504968 MAGI3Q5TCQ9 1506 aa16.26■□□□□ 0.19
SEC24B-203ENST00000504968 WASHC2CQ9Y4E1 1318 aa16.26■□□□□ 0.19
SEC24B-203ENST00000504968 SKAP1Q86WV1 359 aa16.26■□□□□ 0.19
SEC24B-203ENST00000504968 C9orf84Q5VXU9 1444 aa16.26■□□□□ 0.19
SEC24B-203ENST00000504968 CCDC141Q6ZP82 1450 aa16.25■□□□□ 0.19
SEC24B-203ENST00000504968 NUP155O75694 1391 aa16.25■□□□□ 0.19
SEC24B-203ENST00000504968 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.24■□□□□ 0.19
SEC24B-203ENST00000504968 SLC4A3P48751 1232 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms