RNA–Protein interactions for RNA: ENST00000504968.6

SEC24B-203, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC24B, Length 4,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-203ENST00000504968 NISCHQ9Y2I1 1504 aa24.68■■□□□ 1.54
SEC24B-203ENST00000504968 DCAF8L2P0C7V8 631 aa21.79■■□□□ 1.08
SEC24B-203ENST00000504968 CCDC180Q9P1Z9 1646 aa21.4■■□□□ 1.02
SEC24B-203ENST00000504968 ABCC9O60706 1549 aa21.24■□□□□ 0.99
SEC24B-203ENST00000504968 SHROOM4Q9ULL8 1493 aa20.63■□□□□ 0.89
SEC24B-203ENST00000504968 ZCCHC6Q5VYS8 1495 aaKnown RBP20.53■□□□□ 0.88
SEC24B-203ENST00000504968 PPARGC1BQ86YN6 1023 aaKnown RBP20.4■□□□□ 0.86
SEC24B-203ENST00000504968 RB1CC1Q8TDY2 1594 aa20.33■□□□□ 0.84
SEC24B-203ENST00000504968 NACADO15069 1562 aa20.31■□□□□ 0.84
SEC24B-203ENST00000504968 PABPN1Q86U42 306 aaKnown RBP eCLIP20.2■□□□□ 0.82
SEC24B-203ENST00000504968 HRCP23327 699 aa20.19■□□□□ 0.82
SEC24B-203ENST00000504968 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
SEC24B-203ENST00000504968 PCGF6Q9BYE7 350 aa20.14■□□□□ 0.81
SEC24B-203ENST00000504968 MYO15BQ96JP2 1530 aa20.05■□□□□ 0.8
SEC24B-203ENST00000504968 SCRIBQ14160 1630 aa20.03■□□□□ 0.8
SEC24B-203ENST00000504968 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
SEC24B-203ENST00000504968 SCAF1Q9H7N4 1312 aaKnown RBP19.5■□□□□ 0.71
SEC24B-203ENST00000504968 PELP1Q8IZL8 1130 aaKnown RBP19.48■□□□□ 0.71
SEC24B-203ENST00000504968 LOC105371045A0A1W2PR82 267 aa19.3■□□□□ 0.68
SEC24B-203ENST00000504968 CECR2Q9BXF3 1484 aa19.26■□□□□ 0.67
SEC24B-203ENST00000504968 CHIC1Q5VXU3 224 aa19.25■□□□□ 0.67
SEC24B-203ENST00000504968 BICRAQ9NZM4 1560 aa19.25■□□□□ 0.67
SEC24B-203ENST00000504968 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
SEC24B-203ENST00000504968 BAZ1AQ9NRL2 1556 aaPredicted RBP19.2■□□□□ 0.66
SEC24B-203ENST00000504968 RSF1Q96T23 1441 aaPredicted RBP19.11■□□□□ 0.65
SEC24B-203ENST00000504968 EHMT2Q96KQ7 1210 aa19.09■□□□□ 0.65
SEC24B-203ENST00000504968 MROH2BQ7Z745 1585 aa19.04■□□□□ 0.64
SEC24B-203ENST00000504968 EIF4G1Q04637 1599 aaKnown RBP19.01■□□□□ 0.63
SEC24B-203ENST00000504968 BAZ1BQ9UIG0 1483 aaKnown RBP19.01■□□□□ 0.63
SEC24B-203ENST00000504968 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
SEC24B-203ENST00000504968 SMARCA2P51531 1590 aa18.96■□□□□ 0.63
SEC24B-203ENST00000504968 NEUROD1Q13562 356 aa18.92■□□□□ 0.62
SEC24B-203ENST00000504968 ATAD2BQ9ULI0 1458 aa18.9■□□□□ 0.62
SEC24B-203ENST00000504968 TRIM26Q12899 539 aaPredicted RBP18.9■□□□□ 0.62
SEC24B-203ENST00000504968 GTF3C3Q9Y5Q9 886 aa18.89■□□□□ 0.61
SEC24B-203ENST00000504968 DNAJC5BQ9UF47 199 aa18.86■□□□□ 0.61
SEC24B-203ENST00000504968 CC2D2AQ9P2K1 1620 aa18.83■□□□□ 0.6
SEC24B-203ENST00000504968 WIZO95785 1651 aa18.8■□□□□ 0.6
SEC24B-203ENST00000504968 NCAPD3P42695 1498 aa18.77■□□□□ 0.59
SEC24B-203ENST00000504968 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
SEC24B-203ENST00000504968 TRIM41Q8WV44 630 aa18.72■□□□□ 0.59
SEC24B-203ENST00000504968 FAM9AQ8IZU1 332 aaPredicted RBP18.7■□□□□ 0.58
SEC24B-203ENST00000504968 YTHDC1Q96MU7 727 aaKnown RBP18.7■□□□□ 0.58
SEC24B-203ENST00000504968 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
SEC24B-203ENST00000504968 MYT1Q01538 1121 aa18.6■□□□□ 0.57
SEC24B-203ENST00000504968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.59■□□□□ 0.57
SEC24B-203ENST00000504968 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.57
SEC24B-203ENST00000504968 TTBK1Q5TCY1 1321 aaPredicted RBP18.58■□□□□ 0.57
SEC24B-203ENST00000504968 HMGXB3Q12766 1538 aa18.58■□□□□ 0.56
SEC24B-203ENST00000504968 ZEB1P37275 1124 aaPredicted RBP18.57■□□□□ 0.56
SEC24B-203ENST00000504968 ERCC6Q03468 1493 aa18.52■□□□□ 0.56
SEC24B-203ENST00000504968 CADPSQ9ULU8 1353 aa18.51■□□□□ 0.55
SEC24B-203ENST00000504968 PEG3Q9GZU2 1588 aa18.49■□□□□ 0.55
SEC24B-203ENST00000504968 PDS5BQ9NTI5 1447 aa18.46■□□□□ 0.55
SEC24B-203ENST00000504968 CENPBP07199 599 aaPredicted RBP18.44■□□□□ 0.54
SEC24B-203ENST00000504968 DIEXFQ68CQ4 756 aaKnown RBP18.43■□□□□ 0.54
SEC24B-203ENST00000504968 CCER1Q8TC90 406 aaPredicted RBP18.42■□□□□ 0.54
SEC24B-203ENST00000504968 NESP48681 1621 aa18.29■□□□□ 0.52
SEC24B-203ENST00000504968 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
SEC24B-203ENST00000504968 WRNQ14191 1432 aaPredicted RBP eCLIP18.25■□□□□ 0.51
SEC24B-203ENST00000504968 CEP164Q9UPV0 1460 aa18.25■□□□□ 0.51
SEC24B-203ENST00000504968 CFTRP13569 1480 aa18.24■□□□□ 0.51
SEC24B-203ENST00000504968 UBTFP17480 764 aaKnown RBP18.17■□□□□ 0.5
SEC24B-203ENST00000504968 LAMC3Q9Y6N6 1575 aa18.16■□□□□ 0.5
SEC24B-203ENST00000504968 FBLN2P98095 1184 aa18.16■□□□□ 0.5
SEC24B-203ENST00000504968 BCL11AQ9H165 835 aa18.13■□□□□ 0.49
SEC24B-203ENST00000504968 RANGAP1P46060 587 aaPredicted RBP18.12■□□□□ 0.49
SEC24B-203ENST00000504968 ABCC8Q09428 1581 aa18.07■□□□□ 0.48
SEC24B-203ENST00000504968 MIER1Q8N108 512 aa18.02■□□□□ 0.48
SEC24B-203ENST00000504968 SOGA1O94964 1423 aa18.02■□□□□ 0.47
SEC24B-203ENST00000504968 CSRNP3Q8WYN3 585 aa18.02■□□□□ 0.47
SEC24B-203ENST00000504968 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
SEC24B-203ENST00000504968 CHMP7Q8WUX9 453 aaPredicted RBP17.95■□□□□ 0.46
SEC24B-203ENST00000504968 KIF27Q86VH2 1401 aa17.94■□□□□ 0.46
SEC24B-203ENST00000504968 TDRD9Q8NDG6 1382 aaKnown RBP17.93■□□□□ 0.46
SEC24B-203ENST00000504968 CUX2O14529 1486 aa17.93■□□□□ 0.46
SEC24B-203ENST00000504968 FGD5Q6ZNL6 1462 aa17.89■□□□□ 0.45
SEC24B-203ENST00000504968 TOPBP1Q92547 1522 aa17.89■□□□□ 0.45
SEC24B-203ENST00000504968 BCANQ96GW7 911 aa17.87■□□□□ 0.45
SEC24B-203ENST00000504968 ATP1B4Q9UN42 357 aaPredicted RBP17.84■□□□□ 0.45
SEC24B-203ENST00000504968 APLP2Q06481 763 aa17.84■□□□□ 0.45
SEC24B-203ENST00000504968 ZNF316A6NFI3 1004 aaPredicted RBP17.83■□□□□ 0.45
SEC24B-203ENST00000504968 DNMBPQ6XZF7 1577 aa17.83■□□□□ 0.44
SEC24B-203ENST00000504968 RAD54L2Q9Y4B4 1467 aa17.83■□□□□ 0.44
SEC24B-203ENST00000504968 EEA1Q15075 1411 aa17.82■□□□□ 0.44
SEC24B-203ENST00000504968 CUX1P39880 1505 aa17.81■□□□□ 0.44
SEC24B-203ENST00000504968 URB2Q14146 1524 aaKnown RBP17.8■□□□□ 0.44
SEC24B-203ENST00000504968 ANP32EQ9BTT0 268 aa17.78■□□□□ 0.44
SEC24B-203ENST00000504968 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
SEC24B-203ENST00000504968 IFT140Q96RY7 1462 aa17.77■□□□□ 0.43
SEC24B-203ENST00000504968 KIF21AQ7Z4S6 1674 aa17.76■□□□□ 0.43
SEC24B-203ENST00000504968 SYNJ1O43426 1573 aa17.76■□□□□ 0.43
SEC24B-203ENST00000504968 TOP2BQ02880 1626 aa17.73■□□□□ 0.43
SEC24B-203ENST00000504968 CARMIL1Q5VZK9 1371 aa17.73■□□□□ 0.43
SEC24B-203ENST00000504968 AQRO60306 1485 aaKnown RBP eCLIP17.72■□□□□ 0.432e-9■■■■■ 40.3
SEC24B-203ENST00000504968 TSHZ2Q9NRE2 1034 aa17.72■□□□□ 0.43
SEC24B-203ENST00000504968 SUPT16HQ9Y5B9 1047 aaKnown RBP17.72■□□□□ 0.43
SEC24B-203ENST00000504968 GAPVD1Q14C86 1478 aa17.7■□□□□ 0.42
SEC24B-203ENST00000504968 HNRNPUL2Q1KMD3 747 aaKnown RBP17.69■□□□□ 0.42
SEC24B-203ENST00000504968 PRDM2Q13029 1718 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms