RNA–Protein interactions for RNA: ENST00000498627.1

PUM1-212, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-212ENST00000498627 TSPOAP1O95153 1857 aa12.91□□□□□ -0.34
PUM1-212ENST00000498627 CDK13Q14004 1512 aaKnown RBP12.9□□□□□ -0.34
PUM1-212ENST00000498627 PCF11O94913 1555 aaKnown RBP12.9□□□□□ -0.35
PUM1-212ENST00000498627 CASKIN1Q8WXD9 1431 aa12.89□□□□□ -0.35
PUM1-212ENST00000498627 ABCB7O75027 752 aa12.88□□□□□ -0.35
PUM1-212ENST00000498627 POLA2Q14181 598 aa12.88□□□□□ -0.35
PUM1-212ENST00000498627 GLI2P10070 1586 aa12.88□□□□□ -0.35
PUM1-212ENST00000498627 LMTK3Q96Q04 1460 aa12.87□□□□□ -0.35
PUM1-212ENST00000498627 EPRSP07814 1512 aaKnown RBP12.87□□□□□ -0.35
PUM1-212ENST00000498627 LRRIQ1Q96JM4 1722 aa12.86□□□□□ -0.35
PUM1-212ENST00000498627 PLEKHD1A6NEE1 506 aa12.86□□□□□ -0.35
PUM1-212ENST00000498627 DSG3P32926 999 aa12.86□□□□□ -0.35
PUM1-212ENST00000498627 HECW1Q76N89 1606 aa12.85□□□□□ -0.35
PUM1-212ENST00000498627 VPS8Q8N3P4 1428 aa12.85□□□□□ -0.35
PUM1-212ENST00000498627 TEX14Q8IWB6 1497 aa12.85□□□□□ -0.35
PUM1-212ENST00000498627 FYCO1Q9BQS8 1478 aa12.84□□□□□ -0.35
PUM1-212ENST00000498627 WDR7Q9Y4E6 1490 aa12.84□□□□□ -0.35
PUM1-212ENST00000498627 SOCS7O14512 581 aa12.81□□□□□ -0.36
PUM1-212ENST00000498627 CDK11AQ9UQ88 783 aaPredicted RBP12.79□□□□□ -0.36
PUM1-212ENST00000498627 MAGI3Q5TCQ9 1506 aa12.78□□□□□ -0.36
PUM1-212ENST00000498627 KANK4Q5T7N3 995 aaPredicted RBP12.78□□□□□ -0.36
PUM1-212ENST00000498627 CCDC18Q5T9S5 1454 aa12.78□□□□□ -0.36
PUM1-212ENST00000498627 PPRC1Q5VV67 1664 aaKnown RBP12.77□□□□□ -0.36
PUM1-212ENST00000498627 PPARGC1BQ86YN6 1023 aaKnown RBP12.76□□□□□ -0.37
PUM1-212ENST00000498627 TROQ12816 1431 aaPredicted RBP12.76□□□□□ -0.37
PUM1-212ENST00000498627 CD109Q6YHK3 1445 aa12.74□□□□□ -0.37
PUM1-212ENST00000498627 KIF14Q15058 1648 aa12.73□□□□□ -0.37
PUM1-212ENST00000498627 MTUS2Q5JR59 1369 aa12.73□□□□□ -0.37
PUM1-212ENST00000498627 COL17A1Q9UMD9 1497 aaPredicted RBP12.72□□□□□ -0.37
PUM1-212ENST00000498627 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
PUM1-212ENST00000498627 MAP3K4Q9Y6R4 1608 aa12.72□□□□□ -0.37
PUM1-212ENST00000498627 TIAM1Q13009 1591 aa12.72□□□□□ -0.37
PUM1-212ENST00000498627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.72□□□□□ -0.37
PUM1-212ENST00000498627 TTC37Q6PGP7 1564 aa12.7□□□□□ -0.38
PUM1-212ENST00000498627 CFAP43Q8NDM7 1665 aa12.69□□□□□ -0.38
PUM1-212ENST00000498627 ABCA9Q8IUA7 1624 aa12.69□□□□□ -0.38
PUM1-212ENST00000498627 LRRC9Q6ZRR7 1453 aa12.68□□□□□ -0.38
PUM1-212ENST00000498627 ZBTB12Q9Y330 459 aaPredicted RBP12.68□□□□□ -0.38
PUM1-212ENST00000498627 DISP3Q9P2K9 1392 aa12.66□□□□□ -0.38
PUM1-212ENST00000498627 ZNF777Q9ULD5 760 aaPredicted RBP12.65□□□□□ -0.38
PUM1-212ENST00000498627 MAP3K1Q13233 1512 aa12.65□□□□□ -0.38
PUM1-212ENST00000498627 EHBP1L1Q8N3D4 1523 aa12.65□□□□□ -0.38
PUM1-212ENST00000498627 PLCH2O75038 1416 aa12.64□□□□□ -0.39
PUM1-212ENST00000498627 CCNB3Q8WWL7 1395 aa12.64□□□□□ -0.39
PUM1-212ENST00000498627 NCOA2Q15596 1464 aa12.64□□□□□ -0.39
PUM1-212ENST00000498627 EFCAB2Q5VUJ9 269 aa12.63□□□□□ -0.39
PUM1-212ENST00000498627 GPATCH8Q9UKJ3 1502 aaKnown RBP12.62□□□□□ -0.39
PUM1-212ENST00000498627 ZNF644Q9H582 1327 aaPredicted RBP12.62□□□□□ -0.39
PUM1-212ENST00000498627 FANCAO15360 1455 aa12.61□□□□□ -0.39
PUM1-212ENST00000498627 PTPRMP28827 1452 aa12.61□□□□□ -0.39
PUM1-212ENST00000498627 RAPGEF3O95398 923 aa12.61□□□□□ -0.39
PUM1-212ENST00000498627 FKBP8Q14318 412 aa12.61□□□□□ -0.39
PUM1-212ENST00000498627 CERKQ8TCT0 537 aa12.61□□□□□ -0.39
PUM1-212ENST00000498627 CFDP1Q9UEE9 299 aaPredicted RBP12.61□□□□□ -0.39
PUM1-212ENST00000498627 ARHGAP5Q13017 1502 aa12.61□□□□□ -0.39
PUM1-212ENST00000498627 AKNAQ7Z591 1439 aa12.61□□□□□ -0.39
PUM1-212ENST00000498627 CDC42BPAQ5VT25 1732 aa12.6□□□□□ -0.39
PUM1-212ENST00000498627 SUPT6HQ7KZ85 1726 aaKnown RBP12.6□□□□□ -0.39
PUM1-212ENST00000498627 MYO5CQ9NQX4 1742 aa12.6□□□□□ -0.39
PUM1-212ENST00000498627 CDC42BPBQ9Y5S2 1711 aa12.6□□□□□ -0.39
PUM1-212ENST00000498627 ILDR2Q71H61 639 aa12.6□□□□□ -0.39
PUM1-212ENST00000498627 PHLDB1Q86UU1 1377 aa12.58□□□□□ -0.4
PUM1-212ENST00000498627 HNRNPMP52272 730 aaKnown RBP eCLIP12.58□□□□□ -0.4
PUM1-212ENST00000498627 SCAPERQ9BY12 1400 aa12.57□□□□□ -0.4
PUM1-212ENST00000498627 NEO1Q92859 1461 aa12.57□□□□□ -0.4
PUM1-212ENST00000498627 PREX2Q70Z35 1606 aa12.56□□□□□ -0.4
PUM1-212ENST00000498627 AFAP1Q8N556 730 aa12.56□□□□□ -0.4
PUM1-212ENST00000498627 ADAMTSL3P82987 1691 aa12.56□□□□□ -0.4
PUM1-212ENST00000498627 ARAP3Q8WWN8 1544 aa12.55□□□□□ -0.4
PUM1-212ENST00000498627 ARHGEF12Q9NZN5 1544 aa12.55□□□□□ -0.4
PUM1-212ENST00000498627 MYOM3Q5VTT5 1437 aa12.54□□□□□ -0.4
PUM1-212ENST00000498627 SAMD9LQ8IVG5 1584 aa12.53□□□□□ -0.4
PUM1-212ENST00000498627 TRAPPC8Q9Y2L5 1435 aa12.53□□□□□ -0.4
PUM1-212ENST00000498627 DENND4BO75064 1496 aaPredicted RBP12.53□□□□□ -0.4
PUM1-212ENST00000498627 MYT1LQ9UL68 1186 aa12.51□□□□□ -0.41
PUM1-212ENST00000498627 CFAP74Q9C0B2 1584 aa12.51□□□□□ -0.41
PUM1-212ENST00000498627 FAM50AQ14320 339 aaKnown RBP12.5□□□□□ -0.41
PUM1-212ENST00000498627 SYCP2Q9BX26 1530 aa12.5□□□□□ -0.41
PUM1-212ENST00000498627 ITSN2Q9NZM3 1697 aa12.5□□□□□ -0.41
PUM1-212ENST00000498627 FRMPD1Q5SYB0 1578 aa12.49□□□□□ -0.41
PUM1-212ENST00000498627 ABCC1P33527 1531 aa12.49□□□□□ -0.41
PUM1-212ENST00000498627 CAMSAP2Q08AD1 1489 aa12.49□□□□□ -0.41
PUM1-212ENST00000498627 FGD6Q6ZV73 1430 aa12.49□□□□□ -0.41
PUM1-212ENST00000498627 SPATA31D1Q6ZQQ2 1576 aa12.48□□□□□ -0.41
PUM1-212ENST00000498627 POGZQ7Z3K3 1410 aa12.48□□□□□ -0.41
PUM1-212ENST00000498627 MBD5Q9P267 1494 aa12.47□□□□□ -0.41
PUM1-212ENST00000498627 MIA2Q96PC5 1412 aa12.47□□□□□ -0.41
PUM1-212ENST00000498627 RICTORQ6R327 1708 aa12.47□□□□□ -0.41
PUM1-212ENST00000498627 YEATS2Q9ULM3 1422 aa12.46□□□□□ -0.41
PUM1-212ENST00000498627 KIAA1107Q9UPP5 1409 aa12.46□□□□□ -0.41
PUM1-212ENST00000498627 BCORL1Q5H9F3 1711 aa12.46□□□□□ -0.41
PUM1-212ENST00000498627 SPDYE4A6NLX3 237 aa12.46□□□□□ -0.41
PUM1-212ENST00000498627 PTPN23Q9H3S7 1636 aa12.45□□□□□ -0.42
PUM1-212ENST00000498627 PLEKHH2Q8IVE3 1493 aa12.45□□□□□ -0.42
PUM1-212ENST00000498627 SPAG9O60271 1321 aaKnown RBP12.44□□□□□ -0.42
PUM1-212ENST00000498627 ITGAEP38570 1179 aa12.44□□□□□ -0.42
PUM1-212ENST00000498627 CHIC2Q9UKJ5 165 aa12.44□□□□□ -0.42
PUM1-212ENST00000498627 ZNF518AQ6AHZ1 1483 aa12.44□□□□□ -0.42
PUM1-212ENST00000498627 ARID4BQ4LE39 1312 aaPredicted RBP12.43□□□□□ -0.42
PUM1-212ENST00000498627 TCOF1Q13428 1488 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms