RNA–Protein interactions for RNA: ENST00000498627.1

PUM1-212, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-212ENST00000498627 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
PUM1-212ENST00000498627 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
PUM1-212ENST00000498627 NISCHQ9Y2I1 1504 aa19.32■□□□□ 0.68
PUM1-212ENST00000498627 PHF23Q9BUL5 403 aaPredicted RBP18.82■□□□□ 0.6
PUM1-212ENST00000498627 SENP3Q9H4L4 574 aaPredicted RBP18.42■□□□□ 0.54
PUM1-212ENST00000498627 PLPPR3Q6T4P5 718 aa17.39■□□□□ 0.37
PUM1-212ENST00000498627 FOXD1Q16676 465 aa17.09■□□□□ 0.33
PUM1-212ENST00000498627 ABCC9O60706 1549 aa17.01■□□□□ 0.31
PUM1-212ENST00000498627 CCDC180Q9P1Z9 1646 aa17■□□□□ 0.31
PUM1-212ENST00000498627 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
PUM1-212ENST00000498627 ADRA2BP18089 450 aa16.53■□□□□ 0.24
PUM1-212ENST00000498627 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
PUM1-212ENST00000498627 DCAF8L2P0C7V8 631 aa16.27■□□□□ 0.2
PUM1-212ENST00000498627 PIAS4Q8N2W9 510 aaPredicted RBP16.14■□□□□ 0.17
PUM1-212ENST00000498627 ZCCHC6Q5VYS8 1495 aaKnown RBP16.11■□□□□ 0.17
PUM1-212ENST00000498627 RB1CC1Q8TDY2 1594 aa16.08■□□□□ 0.16
PUM1-212ENST00000498627 NACADO15069 1562 aa15.99■□□□□ 0.15
PUM1-212ENST00000498627 DCAF1Q9Y4B6 1507 aa15.9■□□□□ 0.14
PUM1-212ENST00000498627 MYO15BQ96JP2 1530 aa15.89■□□□□ 0.13
PUM1-212ENST00000498627 DNAJC5Q9H3Z4 198 aa15.76■□□□□ 0.11
PUM1-212ENST00000498627 PABPN1Q86U42 306 aaKnown RBP eCLIP15.7■□□□□ 0.1
PUM1-212ENST00000498627 MSH5O43196 834 aa15.69■□□□□ 0.1
PUM1-212ENST00000498627 SCRIBQ14160 1630 aa15.67■□□□□ 0.1
PUM1-212ENST00000498627 UNC13AQ9UPW8 1703 aa15.66■□□□□ 0.1
PUM1-212ENST00000498627 BICRAQ9NZM4 1560 aa15.55■□□□□ 0.08
PUM1-212ENST00000498627 SHROOM4Q9ULL8 1493 aa15.54■□□□□ 0.08
PUM1-212ENST00000498627 CECR2Q9BXF3 1484 aa15.46■□□□□ 0.07
PUM1-212ENST00000498627 CC2D2AQ9P2K1 1620 aa15.38■□□□□ 0.05
PUM1-212ENST00000498627 PPP4R3CPQ6ZMV5 832 aa15.35■□□□□ 0.05
PUM1-212ENST00000498627 EIF4G1Q04637 1599 aaKnown RBP15.22■□□□□ 0.03
PUM1-212ENST00000498627 KCNA4P22459 653 aa15.15■□□□□ 0.02
PUM1-212ENST00000498627 CUX2O14529 1486 aa15.11■□□□□ 0.01
PUM1-212ENST00000498627 SCAF1Q9H7N4 1312 aaKnown RBP15.09■□□□□ 0.01
PUM1-212ENST00000498627 MAPK8IP2Q13387 824 aaPredicted RBP14.97□□□□□ -0.01
PUM1-212ENST00000498627 NCBP3Q53F19 620 aaKnown RBP14.96□□□□□ -0.01
PUM1-212ENST00000498627 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
PUM1-212ENST00000498627 MROH2BQ7Z745 1585 aa14.94□□□□□ -0.02
PUM1-212ENST00000498627 BAZ1AQ9NRL2 1556 aaPredicted RBP14.93□□□□□ -0.02
PUM1-212ENST00000498627 CNKSR2Q8WXI2 1034 aa14.88□□□□□ -0.03
PUM1-212ENST00000498627 ATAD2BQ9ULI0 1458 aa14.86□□□□□ -0.03
PUM1-212ENST00000498627 RSF1Q96T23 1441 aaPredicted RBP14.83□□□□□ -0.03
PUM1-212ENST00000498627 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
PUM1-212ENST00000498627 WIZO95785 1651 aa14.79□□□□□ -0.04
PUM1-212ENST00000498627 NCAPD3P42695 1498 aa14.79□□□□□ -0.04
PUM1-212ENST00000498627 SMARCA2P51531 1590 aa14.78□□□□□ -0.04
PUM1-212ENST00000498627 NPM3O75607 178 aaKnown RBP14.78□□□□□ -0.04
PUM1-212ENST00000498627 PEG3Q9GZU2 1588 aa14.74□□□□□ -0.05
PUM1-212ENST00000498627 DMRT2Q9Y5R5 561 aa14.74□□□□□ -0.05
PUM1-212ENST00000498627 BAZ1BQ9UIG0 1483 aaKnown RBP14.73□□□□□ -0.05
PUM1-212ENST00000498627 SUPT5HO00267 1087 aaKnown RBP14.7□□□□□ -0.06
PUM1-212ENST00000498627 HMGXB3Q12766 1538 aa14.68□□□□□ -0.06
PUM1-212ENST00000498627 TRIM41Q8WV44 630 aa14.67□□□□□ -0.06
PUM1-212ENST00000498627 TOP2AP11388 1531 aaKnown RBP14.58□□□□□ -0.08
PUM1-212ENST00000498627 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
PUM1-212ENST00000498627 NESP48681 1621 aa14.49□□□□□ -0.09
PUM1-212ENST00000498627 HOXD11P31277 338 aaPredicted RBP14.49□□□□□ -0.09
PUM1-212ENST00000498627 CCDC88BA6NC98 1476 aa14.47□□□□□ -0.09
PUM1-212ENST00000498627 THOC2Q8NI27 1593 aaKnown RBP14.44□□□□□ -0.1
PUM1-212ENST00000498627 SLC4A1APQ9BWU0 796 aaKnown RBP14.44□□□□□ -0.1
PUM1-212ENST00000498627 CADPSQ9ULU8 1353 aa14.41□□□□□ -0.1
PUM1-212ENST00000498627 LAMC3Q9Y6N6 1575 aa14.39□□□□□ -0.11
PUM1-212ENST00000498627 PDS5BQ9NTI5 1447 aa14.36□□□□□ -0.11
PUM1-212ENST00000498627 CFTRP13569 1480 aa14.32□□□□□ -0.12
PUM1-212ENST00000498627 OSCARQ8IYS5 282 aa14.3□□□□□ -0.12
PUM1-212ENST00000498627 KIF21AQ7Z4S6 1674 aa14.25□□□□□ -0.13
PUM1-212ENST00000498627 FANCD2Q9BXW9 1451 aa14.24□□□□□ -0.13
PUM1-212ENST00000498627 MRC2Q9UBG0 1479 aa14.18□□□□□ -0.14
PUM1-212ENST00000498627 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
PUM1-212ENST00000498627 WDR62O43379 1518 aa14.17□□□□□ -0.14
PUM1-212ENST00000498627 EHMT2Q96KQ7 1210 aa14.17□□□□□ -0.14
PUM1-212ENST00000498627 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
PUM1-212ENST00000498627 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
PUM1-212ENST00000498627 POTEDQ86YR6 584 aa14.08□□□□□ -0.16
PUM1-212ENST00000498627 DCAF8L1A6NGE4 600 aa14.05□□□□□ -0.16
PUM1-212ENST00000498627 RIMBP3CA6NJZ7 1639 aa14.04□□□□□ -0.16
PUM1-212ENST00000498627 RIMBP3BA6NNM3 1639 aa14.04□□□□□ -0.16
PUM1-212ENST00000498627 RIMBP3Q9UFD9 1639 aa14.04□□□□□ -0.16
PUM1-212ENST00000498627 TOPBP1Q92547 1522 aa14.03□□□□□ -0.16
PUM1-212ENST00000498627 ABCC8Q09428 1581 aa14.02□□□□□ -0.16
PUM1-212ENST00000498627 CUX1P39880 1505 aa14□□□□□ -0.17
PUM1-212ENST00000498627 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
PUM1-212ENST00000498627 TRHP20396 242 aaPredicted RBP13.98□□□□□ -0.17
PUM1-212ENST00000498627 ZBTB22O15209 634 aa13.97□□□□□ -0.17
PUM1-212ENST00000498627 CSRNP3Q8WYN3 585 aa13.97□□□□□ -0.17
PUM1-212ENST00000498627 ARHGEF11O15085 1522 aa13.96□□□□□ -0.17
PUM1-212ENST00000498627 WRNQ14191 1432 aaPredicted RBP eCLIP13.96□□□□□ -0.18
PUM1-212ENST00000498627 SLC4A2P04920 1241 aa13.93□□□□□ -0.18
PUM1-212ENST00000498627 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
PUM1-212ENST00000498627 FGD5Q6ZNL6 1462 aa13.93□□□□□ -0.18
PUM1-212ENST00000498627 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
PUM1-212ENST00000498627 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
PUM1-212ENST00000498627 CYB5RLQ6IPT4 315 aa13.9□□□□□ -0.18
PUM1-212ENST00000498627 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
PUM1-212ENST00000498627 SOGA1O94964 1423 aa13.89□□□□□ -0.19
PUM1-212ENST00000498627 ZNF608Q9ULD9 1512 aaPredicted RBP13.88□□□□□ -0.19
PUM1-212ENST00000498627 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
PUM1-212ENST00000498627 TOP2BQ02880 1626 aa13.86□□□□□ -0.19
PUM1-212ENST00000498627 BIVM-ERCC5R4GMW8 1640 aa13.85□□□□□ -0.19
PUM1-212ENST00000498627 TDRD9Q8NDG6 1382 aaKnown RBP13.84□□□□□ -0.19
PUM1-212ENST00000498627 TARBP1Q13395 1621 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms