RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 KIAA0556O60303 1618 aa8.72□□□□□ -1.01
NF1-215ENST00000493220 KIF3BO15066 747 aa8.71□□□□□ -1.01
NF1-215ENST00000493220 RAPGEF6Q8TEU7 1601 aa8.71□□□□□ -1.01
NF1-215ENST00000493220 NCBP3Q53F19 620 aaKnown RBP8.71□□□□□ -1.02
NF1-215ENST00000493220 TIAM1Q13009 1591 aa8.7□□□□□ -1.02
NF1-215ENST00000493220 CLSPNQ9HAW4 1339 aa8.7□□□□□ -1.02
NF1-215ENST00000493220 WASHC2CQ9Y4E1 1318 aa8.7□□□□□ -1.02
NF1-215ENST00000493220 PCF11O94913 1555 aaKnown RBP8.7□□□□□ -1.02
NF1-215ENST00000493220 FGD6Q6ZV73 1430 aa8.7□□□□□ -1.02
NF1-215ENST00000493220 MIA2Q96PC5 1412 aa8.7□□□□□ -1.02
NF1-215ENST00000493220 KDM2AQ9Y2K7 1162 aa8.7□□□□□ -1.02
NF1-215ENST00000493220 NUP155O75694 1391 aa8.69□□□□□ -1.02
NF1-215ENST00000493220 TEX14Q8IWB6 1497 aa8.69□□□□□ -1.02
NF1-215ENST00000493220 C14orf37Q86TY3 774 aa8.69□□□□□ -1.02
NF1-215ENST00000493220 MAP3K1Q13233 1512 aa8.68□□□□□ -1.02
NF1-215ENST00000493220 POGZQ7Z3K3 1410 aa8.68□□□□□ -1.02
NF1-215ENST00000493220 CD109Q6YHK3 1445 aa8.68□□□□□ -1.02
NF1-215ENST00000493220 NEFMP07197 916 aa8.67□□□□□ -1.02
NF1-215ENST00000493220 CEP170Q5SW79 1584 aa8.67□□□□□ -1.02
NF1-215ENST00000493220 NEFLP07196 543 aa8.67□□□□□ -1.02
NF1-215ENST00000493220 CDCA8Q53HL2 280 aa8.67□□□□□ -1.02
NF1-215ENST00000493220 CDK13Q14004 1512 aaKnown RBP8.66□□□□□ -1.02
NF1-215ENST00000493220 ANP32CO43423 234 aa8.66□□□□□ -1.02
NF1-215ENST00000493220 EID1Q9Y6B2 187 aa8.66□□□□□ -1.02
NF1-215ENST00000493220 RGL3Q3MIN7 710 aa8.65□□□□□ -1.02
NF1-215ENST00000493220 PHLDB1Q86UU1 1377 aa8.65□□□□□ -1.02
NF1-215ENST00000493220 PKD2Q13563 968 aa8.65□□□□□ -1.03
NF1-215ENST00000493220 TIMELESSQ9UNS1 1208 aa8.65□□□□□ -1.03
NF1-215ENST00000493220 CHD1O14646 1710 aa8.65□□□□□ -1.03
NF1-215ENST00000493220 ABCC2Q92887 1545 aa8.64□□□□□ -1.03
NF1-215ENST00000493220 WDR7Q9Y4E6 1490 aa8.64□□□□□ -1.03
NF1-215ENST00000493220 AEBP2Q6ZN18 517 aaPredicted RBP8.64□□□□□ -1.03
NF1-215ENST00000493220 ZNF316A6NFI3 1004 aaPredicted RBP8.63□□□□□ -1.03
NF1-215ENST00000493220 CNGB1Q14028 1251 aaPredicted RBP8.63□□□□□ -1.03
NF1-215ENST00000493220 MPHOSPH9Q99550 1183 aa8.63□□□□□ -1.03
NF1-215ENST00000493220 KIF15Q9NS87 1388 aa8.63□□□□□ -1.03
NF1-215ENST00000493220 ASXL2Q76L83 1435 aa8.63□□□□□ -1.03
NF1-215ENST00000493220 RAB3GAP2Q9H2M9 1393 aa8.63□□□□□ -1.03
NF1-215ENST00000493220 SCAPERQ9BY12 1400 aa8.62□□□□□ -1.03
NF1-215ENST00000493220 TULP1O00294 542 aaPredicted RBP8.62□□□□□ -1.03
NF1-215ENST00000493220 EIF4G2P78344 907 aaKnown RBP eCLIP8.62□□□□□ -1.03
NF1-215ENST00000493220 POGKQ9P215 609 aa8.62□□□□□ -1.03
NF1-215ENST00000493220 ADGRL1O94910 1474 aa8.61□□□□□ -1.03
NF1-215ENST00000493220 ITSN2Q9NZM3 1697 aa8.61□□□□□ -1.03
NF1-215ENST00000493220 C9orf84Q5VXU9 1444 aa8.61□□□□□ -1.03
NF1-215ENST00000493220 ARHGEF11O15085 1522 aa8.6□□□□□ -1.03
NF1-215ENST00000493220 CCDC141Q6ZP82 1450 aa8.6□□□□□ -1.03
NF1-215ENST00000493220 DENND4BO75064 1496 aaPredicted RBP8.6□□□□□ -1.03
NF1-215ENST00000493220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.6□□□□□ -1.03
NF1-215ENST00000493220 HOMEZQ8IX15 550 aa8.59□□□□□ -1.03
NF1-215ENST00000493220 YTHDC1Q96MU7 727 aaKnown RBP8.59□□□□□ -1.03
NF1-215ENST00000493220 CARD11Q9BXL7 1154 aa8.59□□□□□ -1.03
NF1-215ENST00000493220 EIF3AQ14152 1382 aaKnown RBP8.59□□□□□ -1.03
NF1-215ENST00000493220 DISP1Q96F81 1524 aa8.59□□□□□ -1.03
NF1-215ENST00000493220 FANCAO15360 1455 aa8.59□□□□□ -1.03
NF1-215ENST00000493220 AKNAQ7Z591 1439 aa8.59□□□□□ -1.03
NF1-215ENST00000493220 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.59□□□□□ -1.03
NF1-215ENST00000493220 RRBP1Q9P2E9 1410 aaKnown RBP8.59□□□□□ -1.04
NF1-215ENST00000493220 DIEXFQ68CQ4 756 aaKnown RBP8.58□□□□□ -1.04
NF1-215ENST00000493220 ATP10BO94823 1461 aa8.58□□□□□ -1.04
NF1-215ENST00000493220 CCDC144AA2RUR9 1427 aa8.58□□□□□ -1.04
NF1-215ENST00000493220 CAMSAP2Q08AD1 1489 aa8.58□□□□□ -1.04
NF1-215ENST00000493220 ANKRD50Q9ULJ7 1429 aa8.58□□□□□ -1.04
NF1-215ENST00000493220 SAMD9Q5K651 1589 aa8.58□□□□□ -1.04
NF1-215ENST00000493220 UHRF1BP1LA0JNW5 1464 aa8.58□□□□□ -1.04
NF1-215ENST00000493220 DCAF11Q8TEB1 546 aa8.58□□□□□ -1.04
NF1-215ENST00000493220 PODXL2Q9NZ53 605 aa8.58□□□□□ -1.04
NF1-215ENST00000493220 DAPK1P53355 1430 aa8.58□□□□□ -1.04
NF1-215ENST00000493220 NUP153P49790 1475 aaKnown RBP8.57□□□□□ -1.04
NF1-215ENST00000493220 CFAP74Q9C0B2 1584 aa8.57□□□□□ -1.04
NF1-215ENST00000493220 ZNF644Q9H582 1327 aaPredicted RBP8.57□□□□□ -1.04
NF1-215ENST00000493220 PTPN23Q9H3S7 1636 aa8.56□□□□□ -1.04
NF1-215ENST00000493220 PLCH2O75038 1416 aa8.56□□□□□ -1.04
NF1-215ENST00000493220 AFAP1Q8N556 730 aa8.56□□□□□ -1.04
NF1-215ENST00000493220 ROCK1Q13464 1354 aa8.55□□□□□ -1.04
NF1-215ENST00000493220 PPP6R1Q9UPN7 881 aa8.55□□□□□ -1.04
NF1-215ENST00000493220 SCAF1Q9H7N4 1312 aaKnown RBP8.55□□□□□ -1.04
NF1-215ENST00000493220 STAC3Q96MF2 364 aa8.55□□□□□ -1.04
NF1-215ENST00000493220 HAP1P54257 671 aaPredicted RBP8.54□□□□□ -1.04
NF1-215ENST00000493220 CFAP43Q8NDM7 1665 aa8.54□□□□□ -1.04
NF1-215ENST00000493220 VGFO15240 615 aaPredicted RBP8.54□□□□□ -1.04
NF1-215ENST00000493220 ARXQ96QS3 562 aa8.54□□□□□ -1.04
NF1-215ENST00000493220 SENP3Q9H4L4 574 aaPredicted RBP8.53□□□□□ -1.04
NF1-215ENST00000493220 TMF1P82094 1093 aa8.53□□□□□ -1.04
NF1-215ENST00000493220 TMC1Q8TDI8 760 aa8.53□□□□□ -1.04
NF1-215ENST00000493220 ZNF518AQ6AHZ1 1483 aa8.52□□□□□ -1.05
NF1-215ENST00000493220 RAPGEF3O95398 923 aa8.52□□□□□ -1.05
NF1-215ENST00000493220 ROCK2O75116 1388 aaKnown RBP8.52□□□□□ -1.05
NF1-215ENST00000493220 SIN3AQ96ST3 1273 aa8.51□□□□□ -1.05
NF1-215ENST00000493220 KIAA1107Q9UPP5 1409 aa8.51□□□□□ -1.05
NF1-215ENST00000493220 ABCA8O94911 1581 aa8.5□□□□□ -1.05
NF1-215ENST00000493220 GPATCH8Q9UKJ3 1502 aaKnown RBP8.5□□□□□ -1.05
NF1-215ENST00000493220 FOXD1Q16676 465 aa8.49□□□□□ -1.05
NF1-215ENST00000493220 CLASP1Q7Z460 1538 aa8.49□□□□□ -1.05
NF1-215ENST00000493220 HFM1A2PYH4 1435 aa8.49□□□□□ -1.05
NF1-215ENST00000493220 TPRNQ4KMQ1 711 aa8.49□□□□□ -1.05
NF1-215ENST00000493220 KNSTRNQ9Y448 316 aa8.49□□□□□ -1.05
NF1-215ENST00000493220 CFAP53Q96M91 514 aa8.48□□□□□ -1.05
NF1-215ENST00000493220 ABCC10Q5T3U5 1492 aa8.48□□□□□ -1.05
NF1-215ENST00000493220 NEO1Q92859 1461 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms