RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 ZNF219Q9P2Y4 722 aaPredicted RBP9.33□□□□□ -0.92
LRRC47-203ENST00000479239 TIAM1Q13009 1591 aa9.33□□□□□ -0.92
LRRC47-203ENST00000479239 KIAA0556O60303 1618 aa9.32□□□□□ -0.92
LRRC47-203ENST00000479239 LRRC9Q6ZRR7 1453 aa9.32□□□□□ -0.92
LRRC47-203ENST00000479239 MAP3K4Q9Y6R4 1608 aa9.31□□□□□ -0.92
LRRC47-203ENST00000479239 DISP3Q9P2K9 1392 aa9.31□□□□□ -0.92
LRRC47-203ENST00000479239 ASXL2Q76L83 1435 aa9.31□□□□□ -0.92
LRRC47-203ENST00000479239 ARID3CA6NKF2 412 aa9.29□□□□□ -0.92
LRRC47-203ENST00000479239 ABCC2Q92887 1545 aa9.29□□□□□ -0.92
LRRC47-203ENST00000479239 PLB1Q6P1J6 1458 aa9.28□□□□□ -0.92
LRRC47-203ENST00000479239 MTUS2Q5JR59 1369 aa9.28□□□□□ -0.92
LRRC47-203ENST00000479239 PTPRGP23470 1445 aa9.28□□□□□ -0.92
LRRC47-203ENST00000479239 CCDC18Q5T9S5 1454 aa9.28□□□□□ -0.92
LRRC47-203ENST00000479239 TEX14Q8IWB6 1497 aa9.27□□□□□ -0.93
LRRC47-203ENST00000479239 HECW1Q76N89 1606 aa9.27□□□□□ -0.93
LRRC47-203ENST00000479239 CFAP43Q8NDM7 1665 aa9.26□□□□□ -0.93
LRRC47-203ENST00000479239 EPRSP07814 1512 aaKnown RBP9.26□□□□□ -0.93
LRRC47-203ENST00000479239 SPATA31D1Q6ZQQ2 1576 aa9.25□□□□□ -0.93
LRRC47-203ENST00000479239 CDK11AQ9UQ88 783 aaPredicted RBP9.25□□□□□ -0.93
LRRC47-203ENST00000479239 PTPRMP28827 1452 aa9.24□□□□□ -0.93
LRRC47-203ENST00000479239 NUP153P49790 1475 aaKnown RBP9.24□□□□□ -0.93
LRRC47-203ENST00000479239 PHLDB1Q86UU1 1377 aa9.24□□□□□ -0.93
LRRC47-203ENST00000479239 CCNB3Q8WWL7 1395 aa9.24□□□□□ -0.93
LRRC47-203ENST00000479239 RRBP1Q9P2E9 1410 aaKnown RBP9.23□□□□□ -0.93
LRRC47-203ENST00000479239 ADAMTSL3P82987 1691 aa9.23□□□□□ -0.93
LRRC47-203ENST00000479239 CDK13Q14004 1512 aaKnown RBP9.23□□□□□ -0.93
LRRC47-203ENST00000479239 RAPGEF6Q8TEU7 1601 aa9.23□□□□□ -0.93
LRRC47-203ENST00000479239 HRCP23327 699 aa9.22□□□□□ -0.93
LRRC47-203ENST00000479239 UHRF1BP1LA0JNW5 1464 aa9.21□□□□□ -0.93
LRRC47-203ENST00000479239 EHBP1L1Q8N3D4 1523 aa9.21□□□□□ -0.93
LRRC47-203ENST00000479239 FAM50AQ14320 339 aaKnown RBP9.21□□□□□ -0.94
LRRC47-203ENST00000479239 NCOA2Q15596 1464 aa9.21□□□□□ -0.94
LRRC47-203ENST00000479239 ABCA8O94911 1581 aa9.2□□□□□ -0.94
LRRC47-203ENST00000479239 PLEKHD1A6NEE1 506 aa9.2□□□□□ -0.94
LRRC47-203ENST00000479239 CERKQ8TCT0 537 aa9.2□□□□□ -0.94
LRRC47-203ENST00000479239 UACAQ9BZF9 1416 aa9.2□□□□□ -0.94
LRRC47-203ENST00000479239 MAGI3Q5TCQ9 1506 aa9.2□□□□□ -0.94
LRRC47-203ENST00000479239 SPDYE4A6NLX3 237 aa9.19□□□□□ -0.94
LRRC47-203ENST00000479239 ITGAEP38570 1179 aa9.19□□□□□ -0.94
LRRC47-203ENST00000479239 POTEHQ6S545 545 aa9.19□□□□□ -0.94
LRRC47-203ENST00000479239 LRRIQ1Q96JM4 1722 aa9.19□□□□□ -0.94
LRRC47-203ENST00000479239 ATP10BO94823 1461 aa9.18□□□□□ -0.94
LRRC47-203ENST00000479239 KDM5BQ9UGL1 1544 aa9.18□□□□□ -0.94
LRRC47-203ENST00000479239 ZCCHC11Q5TAX3 1644 aaKnown RBP9.17□□□□□ -0.94
LRRC47-203ENST00000479239 TROQ12816 1431 aaPredicted RBP9.17□□□□□ -0.94
LRRC47-203ENST00000479239 MYOM3Q5VTT5 1437 aa9.17□□□□□ -0.94
LRRC47-203ENST00000479239 FGD6Q6ZV73 1430 aa9.17□□□□□ -0.94
LRRC47-203ENST00000479239 FBXO3Q9UK99 471 aa9.17□□□□□ -0.94
LRRC47-203ENST00000479239 MKRN4PQ13434 485 aaPredicted RBP9.16□□□□□ -0.94
LRRC47-203ENST00000479239 CCER1Q8TC90 406 aaPredicted RBP9.16□□□□□ -0.94
LRRC47-203ENST00000479239 SUPT6HQ7KZ85 1726 aaKnown RBP9.16□□□□□ -0.94
LRRC47-203ENST00000479239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.15□□□□□ -0.94
LRRC47-203ENST00000479239 ZEB1P37275 1124 aaPredicted RBP9.15□□□□□ -0.94
LRRC47-203ENST00000479239 MADDQ8WXG6 1647 aa9.15□□□□□ -0.94
LRRC47-203ENST00000479239 BCORL1Q5H9F3 1711 aa9.14□□□□□ -0.95
LRRC47-203ENST00000479239 MIA2Q96PC5 1412 aa9.13□□□□□ -0.95
LRRC47-203ENST00000479239 CFDP1Q9UEE9 299 aaPredicted RBP9.12□□□□□ -0.95
LRRC47-203ENST00000479239 WDR7Q9Y4E6 1490 aa9.12□□□□□ -0.95
LRRC47-203ENST00000479239 HSPA2P54652 639 aa9.11□□□□□ -0.95
LRRC47-203ENST00000479239 ARAP3Q8WWN8 1544 aa9.1□□□□□ -0.95
LRRC47-203ENST00000479239 CD109Q6YHK3 1445 aa9.1□□□□□ -0.95
LRRC47-203ENST00000479239 TCOF1Q13428 1488 aaKnown RBP9.09□□□□□ -0.95
LRRC47-203ENST00000479239 PROM2Q8N271 834 aa9.09□□□□□ -0.95
LRRC47-203ENST00000479239 KCNH8Q96L42 1107 aa9.09□□□□□ -0.95
LRRC47-203ENST00000479239 RIMS1Q86UR5 1692 aaKnown RBP9.09□□□□□ -0.95
LRRC47-203ENST00000479239 GPATCH8Q9UKJ3 1502 aaKnown RBP9.09□□□□□ -0.95
LRRC47-203ENST00000479239 PTPN23Q9H3S7 1636 aa9.09□□□□□ -0.95
LRRC47-203ENST00000479239 ZNF644Q9H582 1327 aaPredicted RBP9.08□□□□□ -0.96
LRRC47-203ENST00000479239 SPINK5Q9NQ38 1064 aaPredicted RBP9.08□□□□□ -0.96
LRRC47-203ENST00000479239 ZNF777Q9ULD5 760 aaPredicted RBP9.08□□□□□ -0.96
LRRC47-203ENST00000479239 SETD5Q9C0A6 1442 aa9.07□□□□□ -0.96
LRRC47-203ENST00000479239 KIF14Q15058 1648 aa9.07□□□□□ -0.96
LRRC47-203ENST00000479239 PTPRKQ15262 1439 aa9.06□□□□□ -0.96
LRRC47-203ENST00000479239 RAB3GAP2Q9H2M9 1393 aa9.05□□□□□ -0.96
LRRC47-203ENST00000479239 VASPP50552 380 aaPredicted RBP9.05□□□□□ -0.96
LRRC47-203ENST00000479239 CHIC2Q9UKJ5 165 aa9.05□□□□□ -0.96
LRRC47-203ENST00000479239 FRMPD1Q5SYB0 1578 aa9.04□□□□□ -0.96
LRRC47-203ENST00000479239 POLA2Q14181 598 aa9.04□□□□□ -0.96
LRRC47-203ENST00000479239 CAMSAP2Q08AD1 1489 aa9.03□□□□□ -0.96
LRRC47-203ENST00000479239 RRP7BPQ9NSQ0 103 aa9.03□□□□□ -0.96
LRRC47-203ENST00000479239 STRCQ7RTU9 1775 aa9.03□□□□□ -0.96
LRRC47-203ENST00000479239 ABCC5O15440 1437 aa9.03□□□□□ -0.96
LRRC47-203ENST00000479239 DHX57Q6P158 1386 aaKnown RBP9.02□□□□□ -0.97
LRRC47-203ENST00000479239 ITSN2Q9NZM3 1697 aa9.02□□□□□ -0.97
LRRC47-203ENST00000479239 HFM1A2PYH4 1435 aa9.02□□□□□ -0.97
LRRC47-203ENST00000479239 DAPK1P53355 1430 aa9.02□□□□□ -0.97
LRRC47-203ENST00000479239 CAPN15O75808 1086 aa9.01□□□□□ -0.97
LRRC47-203ENST00000479239 EFCAB2Q5VUJ9 269 aa9.01□□□□□ -0.97
LRRC47-203ENST00000479239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9□□□□□ -0.97
LRRC47-203ENST00000479239 ARHGEF40Q8TER5 1519 aa9□□□□□ -0.97
LRRC47-203ENST00000479239 NAIPQ13075 1403 aa9□□□□□ -0.97
LRRC47-203ENST00000479239 HNRNPMP52272 730 aaKnown RBP eCLIP9□□□□□ -0.97
LRRC47-203ENST00000479239 CLSPNQ9HAW4 1339 aa9□□□□□ -0.97
LRRC47-203ENST00000479239 SIGLEC1Q9BZZ2 1709 aa9□□□□□ -0.97
LRRC47-203ENST00000479239 ROCK1Q13464 1354 aa8.99□□□□□ -0.97
LRRC47-203ENST00000479239 PLCH2O75038 1416 aa8.99□□□□□ -0.97
LRRC47-203ENST00000479239 AKNAQ7Z591 1439 aa8.99□□□□□ -0.97
LRRC47-203ENST00000479239 TSPY4P0CV99 314 aa8.99□□□□□ -0.97
LRRC47-203ENST00000479239 TSPY10P0CW01 314 aa8.99□□□□□ -0.97
LRRC47-203ENST00000479239 RSPH4AQ5TD94 716 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms