RNA–Protein interactions for RNA: ENST00000479239.1
Retrieved 7 of 7 RNA–protein pairs in 31.3 ms
LRRC47-203, Transcript of leucine rich repeat containing 47, human
TSL 3
Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
LRRC47-203 | ENST00000479239 | PRPF8 | Q6P2Q9 | 2335 aa | Known RBP eCLIP | 4.81 | □□□□□ -1.64 | 2e-9 | ■■■■□ 25.5 |
LRRC47-203 | ENST00000479239 | G3BP1 | Q13283 | 466 aa | Known RBP eCLIP | 7.54 | □□□□□ -1.2 | 4e-9 | ■■■■■ 31.2 |
LRRC47-203 | ENST00000479239 | EFTUD2 | Q15029 | 972 aa | Known RBP eCLIP | 6.2 | □□□□□ -1.42 | 1e-7 | ■■■■■ 57.5 |
LRRC47-203 | ENST00000479239 | PPIG | Q13427 | 754 aa | Known RBP eCLIP | 6.37 | □□□□□ -1.39 | 3e-7 | ■■■■■ 31.6 |
LRRC47-203 | ENST00000479239 | GRWD1 | Q9BQ67 | 446 aa | Known RBP eCLIP | 9.57 | □□□□□ -0.88 | 1e-6 | ■■□□□ 13.9 |
LRRC47-203 | ENST00000479239 | BCLAF1 | Q9NYF8 | 920 aa | Known RBP eCLIP | 7.83 | □□□□□ -1.16 | 3e-6 | ■■□□□ 13.5 |
LRRC47-203 | ENST00000479239 | AQR | O60306 | 1485 aa | Known RBP eCLIP | 9.87 | □□□□□ -0.83 | 5e-6 | ■■□□□ 14.3 |