RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 CHIC1Q5VXU3 224 aa14.94□□□□□ -0.02
LRRC47-203ENST00000479239 AEBP2Q6ZN18 517 aaPredicted RBP14.82□□□□□ -0.04
LRRC47-203ENST00000479239 NISCHQ9Y2I1 1504 aa13.77□□□□□ -0.21
LRRC47-203ENST00000479239 PHF23Q9BUL5 403 aaPredicted RBP13.21□□□□□ -0.29
LRRC47-203ENST00000479239 ABCC9O60706 1549 aa12.53□□□□□ -0.4
LRRC47-203ENST00000479239 SENP3Q9H4L4 574 aaPredicted RBP12.47□□□□□ -0.41
LRRC47-203ENST00000479239 PLPPR3Q6T4P5 718 aa12.35□□□□□ -0.43
LRRC47-203ENST00000479239 DNAJC5BQ9UF47 199 aa12.27□□□□□ -0.45
LRRC47-203ENST00000479239 POTEDQ86YR6 584 aa12.04□□□□□ -0.48
LRRC47-203ENST00000479239 CCDC180Q9P1Z9 1646 aa12.04□□□□□ -0.48
LRRC47-203ENST00000479239 RB1CC1Q8TDY2 1594 aa11.68□□□□□ -0.54
LRRC47-203ENST00000479239 DNAJC5Q9H3Z4 198 aa11.64□□□□□ -0.55
LRRC47-203ENST00000479239 ADRA2BP18089 450 aa11.59□□□□□ -0.55
LRRC47-203ENST00000479239 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
LRRC47-203ENST00000479239 ZCCHC6Q5VYS8 1495 aaKnown RBP11.54□□□□□ -0.56
LRRC47-203ENST00000479239 FOXD1Q16676 465 aa11.53□□□□□ -0.56
LRRC47-203ENST00000479239 PPP6R1Q9UPN7 881 aa11.51□□□□□ -0.57
LRRC47-203ENST00000479239 UNC13AQ9UPW8 1703 aa11.49□□□□□ -0.57
LRRC47-203ENST00000479239 DCAF8L2P0C7V8 631 aa11.49□□□□□ -0.57
LRRC47-203ENST00000479239 NACADO15069 1562 aa11.48□□□□□ -0.57
LRRC47-203ENST00000479239 BICRAQ9NZM4 1560 aa11.43□□□□□ -0.58
LRRC47-203ENST00000479239 DCAF1Q9Y4B6 1507 aa11.37□□□□□ -0.59
LRRC47-203ENST00000479239 CECR2Q9BXF3 1484 aa11.34□□□□□ -0.59
LRRC47-203ENST00000479239 CC2D2AQ9P2K1 1620 aa11.32□□□□□ -0.6
LRRC47-203ENST00000479239 KCNA4P22459 653 aa11.29□□□□□ -0.6
LRRC47-203ENST00000479239 SHROOM4Q9ULL8 1493 aa11.27□□□□□ -0.6
LRRC47-203ENST00000479239 MYO15BQ96JP2 1530 aa11.24□□□□□ -0.61
LRRC47-203ENST00000479239 EIF4G1Q04637 1599 aaKnown RBP11.16□□□□□ -0.62
LRRC47-203ENST00000479239 EHMT2Q96KQ7 1210 aa11.12□□□□□ -0.63
LRRC47-203ENST00000479239 CUX2O14529 1486 aa11.04□□□□□ -0.64
LRRC47-203ENST00000479239 SCRIBQ14160 1630 aa11.03□□□□□ -0.64
LRRC47-203ENST00000479239 PIAS4Q8N2W9 510 aaPredicted RBP11□□□□□ -0.65
LRRC47-203ENST00000479239 PPP4R3CPQ6ZMV5 832 aa10.96□□□□□ -0.65
LRRC47-203ENST00000479239 SUPT5HO00267 1087 aaKnown RBP10.87□□□□□ -0.67
LRRC47-203ENST00000479239 TRIM41Q8WV44 630 aa10.84□□□□□ -0.67
LRRC47-203ENST00000479239 ERCC6Q03468 1493 aa10.82□□□□□ -0.68
LRRC47-203ENST00000479239 SLC4A1APQ9BWU0 796 aaKnown RBP10.82□□□□□ -0.68
LRRC47-203ENST00000479239 NCBP3Q53F19 620 aaKnown RBP10.8□□□□□ -0.68
LRRC47-203ENST00000479239 CSRNP3Q8WYN3 585 aa10.75□□□□□ -0.69
LRRC47-203ENST00000479239 RSF1Q96T23 1441 aaPredicted RBP10.7□□□□□ -0.7
LRRC47-203ENST00000479239 NPM3O75607 178 aaKnown RBP10.67□□□□□ -0.7
LRRC47-203ENST00000479239 THOC2Q8NI27 1593 aaKnown RBP10.67□□□□□ -0.7
LRRC47-203ENST00000479239 MROH2BQ7Z745 1585 aa10.64□□□□□ -0.71
LRRC47-203ENST00000479239 BAZ1AQ9NRL2 1556 aaPredicted RBP10.63□□□□□ -0.71
LRRC47-203ENST00000479239 NESP48681 1621 aa10.62□□□□□ -0.71
LRRC47-203ENST00000479239 NCAPD3P42695 1498 aa10.61□□□□□ -0.71
LRRC47-203ENST00000479239 SMARCA4P51532 1647 aa10.56□□□□□ -0.72
LRRC47-203ENST00000479239 CNKSR2Q8WXI2 1034 aa10.53□□□□□ -0.72
LRRC47-203ENST00000479239 WIZO95785 1651 aa10.52□□□□□ -0.73
LRRC47-203ENST00000479239 SMARCA2P51531 1590 aa10.51□□□□□ -0.73
LRRC47-203ENST00000479239 ATAD2BQ9ULI0 1458 aa10.5□□□□□ -0.73
LRRC47-203ENST00000479239 HMGXB3Q12766 1538 aa10.49□□□□□ -0.73
LRRC47-203ENST00000479239 KIF21AQ7Z4S6 1674 aa10.49□□□□□ -0.73
LRRC47-203ENST00000479239 SCAF1Q9H7N4 1312 aaKnown RBP10.49□□□□□ -0.73
LRRC47-203ENST00000479239 LAMC3Q9Y6N6 1575 aa10.45□□□□□ -0.74
LRRC47-203ENST00000479239 TOP2AP11388 1531 aaKnown RBP10.43□□□□□ -0.74
LRRC47-203ENST00000479239 PEG3Q9GZU2 1588 aa10.42□□□□□ -0.74
LRRC47-203ENST00000479239 MSH5O43196 834 aa10.41□□□□□ -0.74
LRRC47-203ENST00000479239 ZBTB22O15209 634 aa10.39□□□□□ -0.75
LRRC47-203ENST00000479239 RIMBP3CA6NJZ7 1639 aa10.39□□□□□ -0.75
LRRC47-203ENST00000479239 RIMBP3BA6NNM3 1639 aa10.39□□□□□ -0.75
LRRC47-203ENST00000479239 RIMBP3Q9UFD9 1639 aa10.39□□□□□ -0.75
LRRC47-203ENST00000479239 WDR62O43379 1518 aa10.38□□□□□ -0.75
LRRC47-203ENST00000479239 BAZ1BQ9UIG0 1483 aaKnown RBP10.37□□□□□ -0.75
LRRC47-203ENST00000479239 OSCARQ8IYS5 282 aa10.37□□□□□ -0.75
LRRC47-203ENST00000479239 PDS5BQ9NTI5 1447 aa10.37□□□□□ -0.75
LRRC47-203ENST00000479239 CCDC88BA6NC98 1476 aa10.36□□□□□ -0.75
LRRC47-203ENST00000479239 MRC2Q9UBG0 1479 aa10.36□□□□□ -0.75
LRRC47-203ENST00000479239 MAPK8IP2Q13387 824 aaPredicted RBP10.32□□□□□ -0.76
LRRC47-203ENST00000479239 ARHGEF11O15085 1522 aa10.28□□□□□ -0.76
LRRC47-203ENST00000479239 CADPSQ9ULU8 1353 aa10.23□□□□□ -0.77
LRRC47-203ENST00000479239 FOXD4L1Q9NU39 408 aa10.22□□□□□ -0.77
LRRC47-203ENST00000479239 RNF216Q9NWF9 866 aaPredicted RBP10.2□□□□□ -0.78
LRRC47-203ENST00000479239 TRHP20396 242 aaPredicted RBP10.19□□□□□ -0.78
LRRC47-203ENST00000479239 CEP164Q9UPV0 1460 aa10.18□□□□□ -0.78
LRRC47-203ENST00000479239 ARAP1Q96P48 1450 aa10.17□□□□□ -0.78
LRRC47-203ENST00000479239 CYB5RLQ6IPT4 315 aa10.16□□□□□ -0.78
LRRC47-203ENST00000479239 FANCD2Q9BXW9 1451 aa10.13□□□□□ -0.79
LRRC47-203ENST00000479239 CFTRP13569 1480 aa10.11□□□□□ -0.79
LRRC47-203ENST00000479239 URB2Q14146 1524 aaKnown RBP10.11□□□□□ -0.79
LRRC47-203ENST00000479239 ABCC8Q09428 1581 aa10.09□□□□□ -0.79
LRRC47-203ENST00000479239 WRNQ14191 1432 aaPredicted RBP eCLIP10.07□□□□□ -0.8
LRRC47-203ENST00000479239 ZNF608Q9ULD9 1512 aaPredicted RBP10.07□□□□□ -0.8
LRRC47-203ENST00000479239 FAM9AQ8IZU1 332 aaPredicted RBP10.04□□□□□ -0.8
LRRC47-203ENST00000479239 CHD1O14646 1710 aa10.04□□□□□ -0.8
LRRC47-203ENST00000479239 ILDR1Q86SU0 546 aaPredicted RBP10.03□□□□□ -0.8
LRRC47-203ENST00000479239 DMRT2Q9Y5R5 561 aa10.03□□□□□ -0.8
LRRC47-203ENST00000479239 HOXD11P31277 338 aaPredicted RBP10.02□□□□□ -0.81
LRRC47-203ENST00000479239 IFT140Q96RY7 1462 aa10.01□□□□□ -0.81
LRRC47-203ENST00000479239 EIF4G3O43432 1585 aaKnown RBP10□□□□□ -0.81
LRRC47-203ENST00000479239 LOC105371045A0A1W2PR82 267 aa9.99□□□□□ -0.81
LRRC47-203ENST00000479239 SYNJ1O43426 1573 aa9.99□□□□□ -0.81
LRRC47-203ENST00000479239 SLC4A2P04920 1241 aa9.95□□□□□ -0.82
LRRC47-203ENST00000479239 CUX1P39880 1505 aa9.95□□□□□ -0.82
LRRC47-203ENST00000479239 TOP2BQ02880 1626 aa9.95□□□□□ -0.82
LRRC47-203ENST00000479239 SOGA1O94964 1423 aa9.94□□□□□ -0.82
LRRC47-203ENST00000479239 PRDM2Q13029 1718 aa9.93□□□□□ -0.82
LRRC47-203ENST00000479239 EEA1Q15075 1411 aa9.92□□□□□ -0.82
LRRC47-203ENST00000479239 CLASP1Q7Z460 1538 aa9.92□□□□□ -0.82
LRRC47-203ENST00000479239 BIVM-ERCC5R4GMW8 1640 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms