RNA–Protein interactions for RNA: ENST00000478516.1

PFKFB4-212, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, humanhuman

TSL 3

Gene PFKFB4, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB4-212ENST00000478516 TSPOAP1O95153 1857 aa13.42□□□□□ -0.26
PFKFB4-212ENST00000478516 CTTNBP2Q8WZ74 1663 aa13.42□□□□□ -0.26
PFKFB4-212ENST00000478516 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
PFKFB4-212ENST00000478516 SAMD9Q5K651 1589 aa13.38□□□□□ -0.27
PFKFB4-212ENST00000478516 GABBR2O75899 941 aa13.38□□□□□ -0.27
PFKFB4-212ENST00000478516 RANGAP1P46060 587 aaPredicted RBP13.38□□□□□ -0.27
PFKFB4-212ENST00000478516 ABCC2Q92887 1545 aa13.38□□□□□ -0.27
PFKFB4-212ENST00000478516 KDM4FA0A1W2PPD8 638 aa13.37□□□□□ -0.27
PFKFB4-212ENST00000478516 IQGAP2Q13576 1575 aa13.37□□□□□ -0.27
PFKFB4-212ENST00000478516 PLB1Q6P1J6 1458 aa13.36□□□□□ -0.27
PFKFB4-212ENST00000478516 HRCP23327 699 aa13.36□□□□□ -0.27
PFKFB4-212ENST00000478516 PPARGC1BQ86YN6 1023 aaKnown RBP13.36□□□□□ -0.27
PFKFB4-212ENST00000478516 FMN1Q68DA7 1419 aa13.36□□□□□ -0.27
PFKFB4-212ENST00000478516 ASXL2Q76L83 1435 aa13.35□□□□□ -0.27
PFKFB4-212ENST00000478516 CASKIN1Q8WXD9 1431 aa13.35□□□□□ -0.27
PFKFB4-212ENST00000478516 UHRF1BP1LA0JNW5 1464 aa13.35□□□□□ -0.27
PFKFB4-212ENST00000478516 UACAQ9BZF9 1416 aa13.34□□□□□ -0.27
PFKFB4-212ENST00000478516 FKBP8Q14318 412 aa13.34□□□□□ -0.27
PFKFB4-212ENST00000478516 LHX8Q68G74 356 aa13.34□□□□□ -0.27
PFKFB4-212ENST00000478516 UGGT2Q9NYU1 1516 aa13.34□□□□□ -0.27
PFKFB4-212ENST00000478516 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.28
PFKFB4-212ENST00000478516 GLI2P10070 1586 aa13.32□□□□□ -0.28
PFKFB4-212ENST00000478516 FYCO1Q9BQS8 1478 aa13.32□□□□□ -0.28
PFKFB4-212ENST00000478516 MKRN4PQ13434 485 aaPredicted RBP13.32□□□□□ -0.28
PFKFB4-212ENST00000478516 FHOD3Q2V2M9 1422 aa13.31□□□□□ -0.28
PFKFB4-212ENST00000478516 DISP1Q96F81 1524 aa13.31□□□□□ -0.28
PFKFB4-212ENST00000478516 TIAM1Q13009 1591 aa13.29□□□□□ -0.28
PFKFB4-212ENST00000478516 KANK4Q5T7N3 995 aaPredicted RBP13.29□□□□□ -0.28
PFKFB4-212ENST00000478516 CHADLQ6NUI6 762 aa13.28□□□□□ -0.28
PFKFB4-212ENST00000478516 KDM5BQ9UGL1 1544 aa13.28□□□□□ -0.28
PFKFB4-212ENST00000478516 PPRC1Q5VV67 1664 aaKnown RBP13.28□□□□□ -0.28
PFKFB4-212ENST00000478516 EPRSP07814 1512 aaKnown RBP13.26□□□□□ -0.29
PFKFB4-212ENST00000478516 LRRC9Q6ZRR7 1453 aa13.26□□□□□ -0.29
PFKFB4-212ENST00000478516 PCF11O94913 1555 aaKnown RBP13.25□□□□□ -0.29
PFKFB4-212ENST00000478516 RRBP1Q9P2E9 1410 aaKnown RBP13.25□□□□□ -0.29
PFKFB4-212ENST00000478516 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
PFKFB4-212ENST00000478516 P3H3Q8IVL6 736 aa13.25□□□□□ -0.29
PFKFB4-212ENST00000478516 KIAA0556O60303 1618 aa13.24□□□□□ -0.29
PFKFB4-212ENST00000478516 TEX14Q8IWB6 1497 aa13.24□□□□□ -0.29
PFKFB4-212ENST00000478516 ZCCHC11Q5TAX3 1644 aaKnown RBP13.24□□□□□ -0.29
PFKFB4-212ENST00000478516 MAP3K4Q9Y6R4 1608 aa13.24□□□□□ -0.29
PFKFB4-212ENST00000478516 ZEB1P37275 1124 aaPredicted RBP13.23□□□□□ -0.29
PFKFB4-212ENST00000478516 CFAP43Q8NDM7 1665 aa13.23□□□□□ -0.29
PFKFB4-212ENST00000478516 COL17A1Q9UMD9 1497 aaPredicted RBP13.22□□□□□ -0.29
PFKFB4-212ENST00000478516 ADGRL1O94910 1474 aa13.21□□□□□ -0.3
PFKFB4-212ENST00000478516 WDR7Q9Y4E6 1490 aa13.19□□□□□ -0.3
PFKFB4-212ENST00000478516 CCDC18Q5T9S5 1454 aa13.18□□□□□ -0.3
PFKFB4-212ENST00000478516 KCNH8Q96L42 1107 aa13.18□□□□□ -0.3
PFKFB4-212ENST00000478516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.17□□□□□ -0.3
PFKFB4-212ENST00000478516 CCNB3Q8WWL7 1395 aa13.16□□□□□ -0.3
PFKFB4-212ENST00000478516 CD109Q6YHK3 1445 aa13.15□□□□□ -0.3
PFKFB4-212ENST00000478516 HECW1Q76N89 1606 aa13.14□□□□□ -0.31
PFKFB4-212ENST00000478516 MAGI3Q5TCQ9 1506 aa13.13□□□□□ -0.31
PFKFB4-212ENST00000478516 ABCA8O94911 1581 aa13.13□□□□□ -0.31
PFKFB4-212ENST00000478516 PHLDB1Q86UU1 1377 aa13.12□□□□□ -0.31
PFKFB4-212ENST00000478516 ILDR1Q86SU0 546 aaPredicted RBP13.11□□□□□ -0.31
PFKFB4-212ENST00000478516 EHBP1L1Q8N3D4 1523 aa13.1□□□□□ -0.31
PFKFB4-212ENST00000478516 MTUS2Q5JR59 1369 aa13.09□□□□□ -0.31
PFKFB4-212ENST00000478516 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
PFKFB4-212ENST00000478516 LRRIQ1Q96JM4 1722 aa13.08□□□□□ -0.32
PFKFB4-212ENST00000478516 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
PFKFB4-212ENST00000478516 NUP153P49790 1475 aaKnown RBP13.07□□□□□ -0.32
PFKFB4-212ENST00000478516 RAPGEF6Q8TEU7 1601 aa13.06□□□□□ -0.32
PFKFB4-212ENST00000478516 CLCN6P51797 869 aa13.06□□□□□ -0.32
PFKFB4-212ENST00000478516 NCOA2Q15596 1464 aa13.05□□□□□ -0.32
PFKFB4-212ENST00000478516 ARID3CA6NKF2 412 aa13.05□□□□□ -0.32
PFKFB4-212ENST00000478516 FARP1Q9Y4F1 1045 aaPredicted RBP13.05□□□□□ -0.32
PFKFB4-212ENST00000478516 HECW2Q9P2P5 1572 aa13.05□□□□□ -0.32
PFKFB4-212ENST00000478516 ATP10BO94823 1461 aa13.04□□□□□ -0.32
PFKFB4-212ENST00000478516 ARAP3Q8WWN8 1544 aa13.04□□□□□ -0.32
PFKFB4-212ENST00000478516 POTEIP0CG38 1075 aa13.04□□□□□ -0.32
PFKFB4-212ENST00000478516 MYOM3Q5VTT5 1437 aa13.04□□□□□ -0.32
PFKFB4-212ENST00000478516 FGD6Q6ZV73 1430 aa13.04□□□□□ -0.32
PFKFB4-212ENST00000478516 SUPT6HQ7KZ85 1726 aaKnown RBP13.03□□□□□ -0.32
PFKFB4-212ENST00000478516 CCER1Q8TC90 406 aaPredicted RBP13.03□□□□□ -0.32
PFKFB4-212ENST00000478516 CDK11AQ9UQ88 783 aaPredicted RBP13.03□□□□□ -0.32
PFKFB4-212ENST00000478516 CLSPNQ9HAW4 1339 aa13.02□□□□□ -0.33
PFKFB4-212ENST00000478516 MIA2Q96PC5 1412 aa13.02□□□□□ -0.33
PFKFB4-212ENST00000478516 CDK13Q14004 1512 aaKnown RBP13□□□□□ -0.33
PFKFB4-212ENST00000478516 ABCA9Q8IUA7 1624 aa12.99□□□□□ -0.33
PFKFB4-212ENST00000478516 TCOF1Q13428 1488 aaKnown RBP12.99□□□□□ -0.33
PFKFB4-212ENST00000478516 TROQ12816 1431 aaPredicted RBP12.98□□□□□ -0.33
PFKFB4-212ENST00000478516 RAPGEF3O95398 923 aa12.97□□□□□ -0.33
PFKFB4-212ENST00000478516 DCBLD2Q96PD2 775 aa12.97□□□□□ -0.33
PFKFB4-212ENST00000478516 NEO1Q92859 1461 aa12.97□□□□□ -0.33
PFKFB4-212ENST00000478516 PLEKHD1A6NEE1 506 aa12.95□□□□□ -0.34
PFKFB4-212ENST00000478516 SETD5Q9C0A6 1442 aa12.94□□□□□ -0.34
PFKFB4-212ENST00000478516 ARID4BQ4LE39 1312 aaPredicted RBP12.93□□□□□ -0.34
PFKFB4-212ENST00000478516 FAM50AQ14320 339 aaKnown RBP12.93□□□□□ -0.34
PFKFB4-212ENST00000478516 DHX57Q6P158 1386 aaKnown RBP12.93□□□□□ -0.34
PFKFB4-212ENST00000478516 PTPRMP28827 1452 aa12.92□□□□□ -0.34
PFKFB4-212ENST00000478516 ADAMTSL3P82987 1691 aa12.92□□□□□ -0.34
PFKFB4-212ENST00000478516 AKNAQ7Z591 1439 aa12.91□□□□□ -0.34
PFKFB4-212ENST00000478516 PLSCR2Q9NRY7 297 aa12.91□□□□□ -0.34
PFKFB4-212ENST00000478516 PTPN23Q9H3S7 1636 aa12.91□□□□□ -0.34
PFKFB4-212ENST00000478516 HFM1A2PYH4 1435 aa12.89□□□□□ -0.35
PFKFB4-212ENST00000478516 RAB3GAP2Q9H2M9 1393 aa12.89□□□□□ -0.35
PFKFB4-212ENST00000478516 PTPRKQ15262 1439 aa12.88□□□□□ -0.35
PFKFB4-212ENST00000478516 DENND4BO75064 1496 aaPredicted RBP12.88□□□□□ -0.35
PFKFB4-212ENST00000478516 BCORL1Q5H9F3 1711 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms