RNA–Protein interactions for RNA: ENST00000478516.1

PFKFB4-212, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, humanhuman

TSL 3

Gene PFKFB4, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB4-212ENST00000478516 AEBP2Q6ZN18 517 aaPredicted RBP25.58■■□□□ 1.69
PFKFB4-212ENST00000478516 CHIC1Q5VXU3 224 aa24■■□□□ 1.43
PFKFB4-212ENST00000478516 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
PFKFB4-212ENST00000478516 PHF23Q9BUL5 403 aaPredicted RBP21.62■■□□□ 1.05
PFKFB4-212ENST00000478516 FOXD1Q16676 465 aa20.5■□□□□ 0.87
PFKFB4-212ENST00000478516 POTEDQ86YR6 584 aa19.73■□□□□ 0.75
PFKFB4-212ENST00000478516 NISCHQ9Y2I1 1504 aa19.53■□□□□ 0.72
PFKFB4-212ENST00000478516 MSH5O43196 834 aa19.42■□□□□ 0.7
PFKFB4-212ENST00000478516 PIAS4Q8N2W9 510 aaPredicted RBP19.07■□□□□ 0.64
PFKFB4-212ENST00000478516 PLPPR3Q6T4P5 718 aa18.89■□□□□ 0.61
PFKFB4-212ENST00000478516 PPP6R1Q9UPN7 881 aa18.8■□□□□ 0.6
PFKFB4-212ENST00000478516 ADRA2BP18089 450 aa18.73■□□□□ 0.59
PFKFB4-212ENST00000478516 ABCC9O60706 1549 aa17.56■□□□□ 0.4
PFKFB4-212ENST00000478516 CCDC180Q9P1Z9 1646 aa17.43■□□□□ 0.38
PFKFB4-212ENST00000478516 MAPK8IP2Q13387 824 aaPredicted RBP17.35■□□□□ 0.37
PFKFB4-212ENST00000478516 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
PFKFB4-212ENST00000478516 SCAF1Q9H7N4 1312 aaKnown RBP17.22■□□□□ 0.35
PFKFB4-212ENST00000478516 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
PFKFB4-212ENST00000478516 DCAF8L1A6NGE4 600 aa16.72■□□□□ 0.27
PFKFB4-212ENST00000478516 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
PFKFB4-212ENST00000478516 DNAJC5BQ9UF47 199 aa16.6■□□□□ 0.25
PFKFB4-212ENST00000478516 NACADO15069 1562 aa16.53■□□□□ 0.24
PFKFB4-212ENST00000478516 DCAF8L2P0C7V8 631 aa16.5■□□□□ 0.23
PFKFB4-212ENST00000478516 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
PFKFB4-212ENST00000478516 PPP4R3CPQ6ZMV5 832 aa16.49■□□□□ 0.23
PFKFB4-212ENST00000478516 RNF39Q9H2S5 420 aa16.49■□□□□ 0.23
PFKFB4-212ENST00000478516 ZCCHC6Q5VYS8 1495 aaKnown RBP16.43■□□□□ 0.22
PFKFB4-212ENST00000478516 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
PFKFB4-212ENST00000478516 CNKSR2Q8WXI2 1034 aa16.3■□□□□ 0.2
PFKFB4-212ENST00000478516 RNF216Q9NWF9 866 aaPredicted RBP16.27■□□□□ 0.2
PFKFB4-212ENST00000478516 MYO15BQ96JP2 1530 aa16.27■□□□□ 0.2
PFKFB4-212ENST00000478516 UNC13AQ9UPW8 1703 aa16.27■□□□□ 0.19
PFKFB4-212ENST00000478516 C1QBPQ07021 282 aaKnown RBP16.26■□□□□ 0.19
PFKFB4-212ENST00000478516 DCAF1Q9Y4B6 1507 aa16.25■□□□□ 0.19
PFKFB4-212ENST00000478516 BICRAQ9NZM4 1560 aa16.16■□□□□ 0.18
PFKFB4-212ENST00000478516 SHROOM4Q9ULL8 1493 aa15.97■□□□□ 0.15
PFKFB4-212ENST00000478516 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
PFKFB4-212ENST00000478516 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
PFKFB4-212ENST00000478516 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
PFKFB4-212ENST00000478516 EIF4G1Q04637 1599 aaKnown RBP15.79■□□□□ 0.12
PFKFB4-212ENST00000478516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.79■□□□□ 0.125e-20■□□□□ 10.9
PFKFB4-212ENST00000478516 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.12
PFKFB4-212ENST00000478516 NPM3O75607 178 aaKnown RBP15.45■□□□□ 0.06
PFKFB4-212ENST00000478516 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
PFKFB4-212ENST00000478516 POTEHQ6S545 545 aa15.39■□□□□ 0.05
PFKFB4-212ENST00000478516 DNAJC5Q9H3Z4 198 aa15.38■□□□□ 0.05
PFKFB4-212ENST00000478516 KCNA4P22459 653 aa15.33■□□□□ 0.04
PFKFB4-212ENST00000478516 CAPN15O75808 1086 aa15.31■□□□□ 0.04
PFKFB4-212ENST00000478516 U3KPZ7 1027 aaPredicted RBP15.31■□□□□ 0.04
PFKFB4-212ENST00000478516 SUPT5HO00267 1087 aaKnown RBP15.28■□□□□ 0.04
PFKFB4-212ENST00000478516 DSG3P32926 999 aa15.28■□□□□ 0.04
PFKFB4-212ENST00000478516 NCAPD3P42695 1498 aa15.27■□□□□ 0.04
PFKFB4-212ENST00000478516 SPINK5Q9NQ38 1064 aaPredicted RBP15.26■□□□□ 0.03
PFKFB4-212ENST00000478516 CUX2O14529 1486 aa15.2■□□□□ 0.02
PFKFB4-212ENST00000478516 ERCC6Q03468 1493 aa15.2■□□□□ 0.02
PFKFB4-212ENST00000478516 ATAD2BQ9ULI0 1458 aa15.19■□□□□ 0.02
PFKFB4-212ENST00000478516 RSF1Q96T23 1441 aaPredicted RBP15.18■□□□□ 0.02
PFKFB4-212ENST00000478516 SMARCA2P51531 1590 aa15.15■□□□□ 0.02
PFKFB4-212ENST00000478516 SMARCA4P51532 1647 aa15.14■□□□□ 0.01
PFKFB4-212ENST00000478516 HMGXB3Q12766 1538 aa15.12■□□□□ 0.01
PFKFB4-212ENST00000478516 BAZ1AQ9NRL2 1556 aaPredicted RBP15.07■□□□□ 0
PFKFB4-212ENST00000478516 NESP48681 1621 aa15.04■□□□□ -0
PFKFB4-212ENST00000478516 MROH2BQ7Z745 1585 aa15.04■□□□□ -0
PFKFB4-212ENST00000478516 BAZ1BQ9UIG0 1483 aaKnown RBP15.04■□□□□ -0
PFKFB4-212ENST00000478516 PEG3Q9GZU2 1588 aa14.99□□□□□ -0.01
PFKFB4-212ENST00000478516 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
PFKFB4-212ENST00000478516 LAMC3Q9Y6N6 1575 aa14.94□□□□□ -0.02
PFKFB4-212ENST00000478516 APLP2Q06481 763 aa14.94□□□□□ -0.02
PFKFB4-212ENST00000478516 THOC2Q8NI27 1593 aaKnown RBP14.9□□□□□ -0.02
PFKFB4-212ENST00000478516 ZNF219Q9P2Y4 722 aaPredicted RBP14.89□□□□□ -0.03
PFKFB4-212ENST00000478516 PDS5BQ9NTI5 1447 aa14.89□□□□□ -0.03
PFKFB4-212ENST00000478516 ABCB7O75027 752 aa14.88□□□□□ -0.03
PFKFB4-212ENST00000478516 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
PFKFB4-212ENST00000478516 WIZO95785 1651 aa14.86□□□□□ -0.03
PFKFB4-212ENST00000478516 KIF21AQ7Z4S6 1674 aa14.84□□□□□ -0.03
PFKFB4-212ENST00000478516 CADPSQ9ULU8 1353 aa14.82□□□□□ -0.04
PFKFB4-212ENST00000478516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
PFKFB4-212ENST00000478516 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
PFKFB4-212ENST00000478516 TOP2AP11388 1531 aaKnown RBP14.8□□□□□ -0.04
PFKFB4-212ENST00000478516 SLC4A1APQ9BWU0 796 aaKnown RBP14.79□□□□□ -0.04
PFKFB4-212ENST00000478516 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
PFKFB4-212ENST00000478516 MRC2Q9UBG0 1479 aa14.73□□□□□ -0.05
PFKFB4-212ENST00000478516 WDR62O43379 1518 aa14.69□□□□□ -0.06
PFKFB4-212ENST00000478516 SAMD1Q6SPF0 538 aaPredicted RBP14.68□□□□□ -0.06
PFKFB4-212ENST00000478516 CEP164Q9UPV0 1460 aa14.65□□□□□ -0.06
PFKFB4-212ENST00000478516 TRIM41Q8WV44 630 aa14.65□□□□□ -0.06
PFKFB4-212ENST00000478516 CCDC88BA6NC98 1476 aa14.64□□□□□ -0.07
PFKFB4-212ENST00000478516 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
PFKFB4-212ENST00000478516 FANCD2Q9BXW9 1451 aa14.62□□□□□ -0.07
PFKFB4-212ENST00000478516 CFTRP13569 1480 aa14.6□□□□□ -0.07
PFKFB4-212ENST00000478516 OSCARQ8IYS5 282 aa14.56□□□□□ -0.08
PFKFB4-212ENST00000478516 CHRDL2Q6WN34 429 aa14.49□□□□□ -0.09
PFKFB4-212ENST00000478516 URB2Q14146 1524 aaKnown RBP14.49□□□□□ -0.09
PFKFB4-212ENST00000478516 POLA2Q14181 598 aa14.43□□□□□ -0.1
PFKFB4-212ENST00000478516 PRDM2Q13029 1718 aa14.42□□□□□ -0.1
PFKFB4-212ENST00000478516 IFT140Q96RY7 1462 aa14.38□□□□□ -0.11
PFKFB4-212ENST00000478516 ZNF608Q9ULD9 1512 aaPredicted RBP14.33□□□□□ -0.12
PFKFB4-212ENST00000478516 MYCNP04198 464 aaPredicted RBP14.33□□□□□ -0.12
PFKFB4-212ENST00000478516 ABCC8Q09428 1581 aa14.33□□□□□ -0.12
PFKFB4-212ENST00000478516 TOPBP1Q92547 1522 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms