RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 NAIPQ13075 1403 aa14.07□□□□□ -0.16
ABCF1-205ENST00000475993 MS4A1P11836 297 aa14.07□□□□□ -0.16
ABCF1-205ENST00000475993 POLR1AO95602 1720 aaPredicted RBP14.04□□□□□ -0.16
ABCF1-205ENST00000475993 HSP90AA2PQ14568 343 aaPredicted RBP14.04□□□□□ -0.16
ABCF1-205ENST00000475993 FYCO1Q9BQS8 1478 aa14.04□□□□□ -0.16
ABCF1-205ENST00000475993 IGF1RP08069 1367 aa14.04□□□□□ -0.16
ABCF1-205ENST00000475993 FMN1Q68DA7 1419 aa14.03□□□□□ -0.16
ABCF1-205ENST00000475993 NFKBIBQ15653 356 aa14.03□□□□□ -0.16
ABCF1-205ENST00000475993 FRAT1Q92837 279 aaPredicted RBP14.03□□□□□ -0.16
ABCF1-205ENST00000475993 FAM43AQ8N2R8 423 aa14.02□□□□□ -0.16
ABCF1-205ENST00000475993 DDRGK1Q96HY6 314 aa14.02□□□□□ -0.16
ABCF1-205ENST00000475993 PRDM2Q13029 1718 aa14.02□□□□□ -0.17
ABCF1-205ENST00000475993 DENND4BO75064 1496 aaPredicted RBP14.01□□□□□ -0.17
ABCF1-205ENST00000475993 KIF7Q2M1P5 1343 aa14.01□□□□□ -0.17
ABCF1-205ENST00000475993 SPATA31E1Q6ZUB1 1445 aa14□□□□□ -0.17
ABCF1-205ENST00000475993 CASKIN1Q8WXD9 1431 aa14□□□□□ -0.17
ABCF1-205ENST00000475993 HECW1Q76N89 1606 aa13.99□□□□□ -0.17
ABCF1-205ENST00000475993 DHX29Q7Z478 1369 aaKnown RBP13.98□□□□□ -0.17
ABCF1-205ENST00000475993 RRP1P56182 461 aaKnown RBP13.98□□□□□ -0.17
ABCF1-205ENST00000475993 EXOC6Q8TAG9 804 aa13.97□□□□□ -0.17
ABCF1-205ENST00000475993 CARMIL1Q5VZK9 1371 aa13.97□□□□□ -0.17
ABCF1-205ENST00000475993 FGD5Q6ZNL6 1462 aa13.97□□□□□ -0.17
ABCF1-205ENST00000475993 L3MBTL2Q969R5 705 aa13.96□□□□□ -0.17
ABCF1-205ENST00000475993 ATP1B4Q9UN42 357 aaPredicted RBP13.95□□□□□ -0.18
ABCF1-205ENST00000475993 CFTRP13569 1480 aa13.95□□□□□ -0.18
ABCF1-205ENST00000475993 RRP9O43818 475 aaKnown RBP13.94□□□□□ -0.18
ABCF1-205ENST00000475993 PNISRQ8TF01 805 aaKnown RBP13.94□□□□□ -0.18
ABCF1-205ENST00000475993 FHOD3Q2V2M9 1422 aa13.94□□□□□ -0.18
ABCF1-205ENST00000475993 P3H3Q8IVL6 736 aa13.92□□□□□ -0.18
ABCF1-205ENST00000475993 DCAF11Q8TEB1 546 aa13.92□□□□□ -0.18
ABCF1-205ENST00000475993 EFCAB5A4FU69 1503 aa13.92□□□□□ -0.18
ABCF1-205ENST00000475993 GCC2Q8IWJ2 1684 aa13.91□□□□□ -0.18
ABCF1-205ENST00000475993 NBPF8Q3BBV2 869 aa13.91□□□□□ -0.18
ABCF1-205ENST00000475993 MYOM3Q5VTT5 1437 aa13.91□□□□□ -0.18
ABCF1-205ENST00000475993 HSP90AA1P07900 732 aaKnown RBP13.91□□□□□ -0.18
ABCF1-205ENST00000475993 LRPPRCP42704 1394 aaKnown RBP13.9□□□□□ -0.19
ABCF1-205ENST00000475993 NAP1L5Q96NT1 182 aaPredicted RBP13.89□□□□□ -0.19
ABCF1-205ENST00000475993 RCAN3Q9UKA8 241 aa13.89□□□□□ -0.19
ABCF1-205ENST00000475993 TEX14Q8IWB6 1497 aa13.89□□□□□ -0.19
ABCF1-205ENST00000475993 MIA2Q96PC5 1412 aa13.88□□□□□ -0.19
ABCF1-205ENST00000475993 MTUS2Q5JR59 1369 aa13.88□□□□□ -0.19
ABCF1-205ENST00000475993 SLC4A3P48751 1232 aa13.87□□□□□ -0.19
ABCF1-205ENST00000475993 RPRD2Q5VT52 1461 aaKnown RBP13.87□□□□□ -0.19
ABCF1-205ENST00000475993 SNAPC4Q5SXM2 1469 aa13.87□□□□□ -0.19
ABCF1-205ENST00000475993 MPHOSPH9Q99550 1183 aa13.86□□□□□ -0.19
ABCF1-205ENST00000475993 SENP3-EIF4A1A0A087X0R7 540 aa13.86□□□□□ -0.19
ABCF1-205ENST00000475993 FRAT2O75474 233 aaPredicted RBP13.85□□□□□ -0.19
ABCF1-205ENST00000475993 KDM6BO15054 1643 aa13.85□□□□□ -0.19
ABCF1-205ENST00000475993 TMC1Q8TDI8 760 aa13.85□□□□□ -0.19
ABCF1-205ENST00000475993 RRP7BPQ9NSQ0 103 aa13.84□□□□□ -0.19
ABCF1-205ENST00000475993 RRAGDQ9NQL2 400 aaPredicted RBP13.84□□□□□ -0.19
ABCF1-205ENST00000475993 ANKRD30BQ9BXX2 1392 aa13.83□□□□□ -0.19
ABCF1-205ENST00000475993 BCORL1Q5H9F3 1711 aa13.83□□□□□ -0.2
ABCF1-205ENST00000475993 SUPT6HQ7KZ85 1726 aaKnown RBP13.82□□□□□ -0.2
ABCF1-205ENST00000475993 ARID4BQ4LE39 1312 aaPredicted RBP13.82□□□□□ -0.2
ABCF1-205ENST00000475993 RGS3P49796 1198 aa13.82□□□□□ -0.2
ABCF1-205ENST00000475993 TCOF1Q13428 1488 aaKnown RBP13.81□□□□□ -0.2
ABCF1-205ENST00000475993 PDE3BQ13370 1112 aa13.81□□□□□ -0.2
ABCF1-205ENST00000475993 SKAP1Q86WV1 359 aa13.81□□□□□ -0.2
ABCF1-205ENST00000475993 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
ABCF1-205ENST00000475993 BRD4O60885 1362 aaPredicted RBP13.81□□□□□ -0.2
ABCF1-205ENST00000475993 LRRIQ1Q96JM4 1722 aa13.8□□□□□ -0.2
ABCF1-205ENST00000475993 ARHGEF11O15085 1522 aa13.8□□□□□ -0.2
ABCF1-205ENST00000475993 CNGB1Q14028 1251 aaPredicted RBP13.8□□□□□ -0.2
ABCF1-205ENST00000475993 UGGT2Q9NYU1 1516 aa13.79□□□□□ -0.2
ABCF1-205ENST00000475993 FOXD1Q16676 465 aa13.79□□□□□ -0.2
ABCF1-205ENST00000475993 EHBP1L1Q8N3D4 1523 aa13.79□□□□□ -0.2
ABCF1-205ENST00000475993 TAF7LQ5H9L4 462 aa13.78□□□□□ -0.2
ABCF1-205ENST00000475993 ROCK2O75116 1388 aaKnown RBP13.78□□□□□ -0.2
ABCF1-205ENST00000475993 KDM2BQ8NHM5 1336 aa13.78□□□□□ -0.2
ABCF1-205ENST00000475993 CHIC2Q9UKJ5 165 aa13.77□□□□□ -0.2
ABCF1-205ENST00000475993 PRDM4Q9UKN5 801 aa13.77□□□□□ -0.2
ABCF1-205ENST00000475993 C8orf34Q49A92 452 aa13.77□□□□□ -0.21
ABCF1-205ENST00000475993 KTN1Q86UP2 1357 aaKnown RBP13.77□□□□□ -0.21
ABCF1-205ENST00000475993 FAM161AQ3B820 660 aa13.77□□□□□ -0.21
ABCF1-205ENST00000475993 KIF15Q9NS87 1388 aa13.76□□□□□ -0.21
ABCF1-205ENST00000475993 USP47Q96K76 1375 aa13.76□□□□□ -0.21
ABCF1-205ENST00000475993 MYBBP1AQ9BQG0 1328 aaKnown RBP13.76□□□□□ -0.21
ABCF1-205ENST00000475993 CRBNQ96SW2 442 aa13.76□□□□□ -0.21
ABCF1-205ENST00000475993 THOC2Q8NI27 1593 aaKnown RBP13.75□□□□□ -0.21
ABCF1-205ENST00000475993 PNNQ9H307 717 aaKnown RBP13.75□□□□□ -0.21
ABCF1-205ENST00000475993 GRIN2BQ13224 1484 aa13.75□□□□□ -0.21
ABCF1-205ENST00000475993 MBD5Q9P267 1494 aa13.75□□□□□ -0.21
ABCF1-205ENST00000475993 CTTNBP2Q8WZ74 1663 aa13.75□□□□□ -0.21
ABCF1-205ENST00000475993 KDM5CP41229 1560 aa13.74□□□□□ -0.21
ABCF1-205ENST00000475993 BBXQ8WY36 941 aaPredicted RBP13.74□□□□□ -0.21
ABCF1-205ENST00000475993 CADPSQ9ULU8 1353 aa13.73□□□□□ -0.21
ABCF1-205ENST00000475993 PLIN1O60240 522 aa13.73□□□□□ -0.21
ABCF1-205ENST00000475993 L1TD1Q5T7N2 865 aaKnown RBP13.73□□□□□ -0.21
ABCF1-205ENST00000475993 POGKQ9P215 609 aa13.73□□□□□ -0.21
ABCF1-205ENST00000475993 RALBP1Q15311 655 aa13.73□□□□□ -0.21
ABCF1-205ENST00000475993 PAXIP1Q6ZW49 1069 aaPredicted RBP13.73□□□□□ -0.21
ABCF1-205ENST00000475993 POLR3GLQ9BT43 218 aa13.72□□□□□ -0.21
ABCF1-205ENST00000475993 NAP1L2Q9ULW6 460 aaPredicted RBP13.72□□□□□ -0.21
ABCF1-205ENST00000475993 CENPQQ7L2Z9 268 aaPredicted RBP13.72□□□□□ -0.21
ABCF1-205ENST00000475993 CDCA7LQ96GN5 454 aa13.71□□□□□ -0.22
ABCF1-205ENST00000475993 CHMP4BQ9H444 224 aaKnown RBP13.71□□□□□ -0.22
ABCF1-205ENST00000475993 CALD1Q05682 793 aaKnown RBP13.7□□□□□ -0.22
ABCF1-205ENST00000475993 KIF14Q15058 1648 aa13.7□□□□□ -0.22
ABCF1-205ENST00000475993 CLCN1P35523 988 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms