RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 KIAA0556O60303 1618 aa7.61□□□□□ -1.19
LMO3-209ENST00000447609 PRKCSHP14314 528 aaPredicted RBP7.61□□□□□ -1.19
LMO3-209ENST00000447609 CASKIN1Q8WXD9 1431 aa7.61□□□□□ -1.19
LMO3-209ENST00000447609 ERCC6L2Q5T890 1561 aa7.61□□□□□ -1.19
LMO3-209ENST00000447609 RIMBP3CA6NJZ7 1639 aa7.61□□□□□ -1.19
LMO3-209ENST00000447609 RIMBP3BA6NNM3 1639 aa7.61□□□□□ -1.19
LMO3-209ENST00000447609 RIMBP3Q9UFD9 1639 aa7.61□□□□□ -1.19
LMO3-209ENST00000447609 DISP1Q96F81 1524 aa7.61□□□□□ -1.19
LMO3-209ENST00000447609 ASXL2Q76L83 1435 aa7.61□□□□□ -1.19
LMO3-209ENST00000447609 FKBP8Q14318 412 aa7.61□□□□□ -1.19
LMO3-209ENST00000447609 CLASP1Q7Z460 1538 aa7.6□□□□□ -1.19
LMO3-209ENST00000447609 CD109Q6YHK3 1445 aa7.6□□□□□ -1.19
LMO3-209ENST00000447609 FANCIQ9NVI1 1328 aa7.6□□□□□ -1.19
LMO3-209ENST00000447609 RRP7BPQ9NSQ0 103 aa7.6□□□□□ -1.19
LMO3-209ENST00000447609 CDK13Q14004 1512 aaKnown RBP7.59□□□□□ -1.19
LMO3-209ENST00000447609 SPAG9O60271 1321 aaKnown RBP7.59□□□□□ -1.19
LMO3-209ENST00000447609 GGT6Q6P531 493 aa7.59□□□□□ -1.2
LMO3-209ENST00000447609 HECW1Q76N89 1606 aa7.58□□□□□ -1.2
LMO3-209ENST00000447609 STAG3Q9UJ98 1225 aa7.58□□□□□ -1.2
LMO3-209ENST00000447609 ABCC2Q92887 1545 aa7.58□□□□□ -1.2
LMO3-209ENST00000447609 TROQ12816 1431 aaPredicted RBP7.57□□□□□ -1.2
LMO3-209ENST00000447609 RAPGEF3O95398 923 aa7.57□□□□□ -1.2
LMO3-209ENST00000447609 EPRSP07814 1512 aaKnown RBP7.57□□□□□ -1.2
LMO3-209ENST00000447609 ATP10BO94823 1461 aa7.57□□□□□ -1.2
LMO3-209ENST00000447609 FYCO1Q9BQS8 1478 aa7.57□□□□□ -1.2
LMO3-209ENST00000447609 ERICH6BQ5W0A0 696 aa7.57□□□□□ -1.2
LMO3-209ENST00000447609 NPM3O75607 178 aaKnown RBP7.57□□□□□ -1.2
LMO3-209ENST00000447609 CHGAP10645 457 aaKnown RBP7.57□□□□□ -1.2
LMO3-209ENST00000447609 BCANQ96GW7 911 aa7.57□□□□□ -1.2
LMO3-209ENST00000447609 KCNA4P22459 653 aa7.56□□□□□ -1.2
LMO3-209ENST00000447609 AFAP1Q8N556 730 aa7.56□□□□□ -1.2
LMO3-209ENST00000447609 RAPGEF6Q8TEU7 1601 aa7.56□□□□□ -1.2
LMO3-209ENST00000447609 ARHGAP5Q13017 1502 aa7.55□□□□□ -1.2
LMO3-209ENST00000447609 RSPH4AQ5TD94 716 aa7.55□□□□□ -1.2
LMO3-209ENST00000447609 WDR7Q9Y4E6 1490 aa7.55□□□□□ -1.2
LMO3-209ENST00000447609 ATXN8OSP0DMR3 200 aa7.54□□□□□ -1.2
LMO3-209ENST00000447609 ZNF644Q9H582 1327 aaPredicted RBP7.54□□□□□ -1.2
LMO3-209ENST00000447609 NUP153P49790 1475 aaKnown RBP7.54□□□□□ -1.2
LMO3-209ENST00000447609 KIF3BO15066 747 aa7.54□□□□□ -1.2
LMO3-209ENST00000447609 PCF11O94913 1555 aaKnown RBP7.53□□□□□ -1.2
LMO3-209ENST00000447609 SCAPERQ9BY12 1400 aa7.53□□□□□ -1.2
LMO3-209ENST00000447609 CCER2I3L3R5 266 aa7.53□□□□□ -1.2
LMO3-209ENST00000447609 DHX57Q6P158 1386 aaKnown RBP7.52□□□□□ -1.21
LMO3-209ENST00000447609 TEX14Q8IWB6 1497 aa7.52□□□□□ -1.21
LMO3-209ENST00000447609 UHRF1BP1LA0JNW5 1464 aa7.5□□□□□ -1.21
LMO3-209ENST00000447609 LRRC9Q6ZRR7 1453 aa7.5□□□□□ -1.21
LMO3-209ENST00000447609 ANP32CO43423 234 aa7.5□□□□□ -1.21
LMO3-209ENST00000447609 NCOA2Q15596 1464 aa7.5□□□□□ -1.21
LMO3-209ENST00000447609 SAMD9Q5K651 1589 aa7.5□□□□□ -1.21
LMO3-209ENST00000447609 DEKP35659 375 aaKnown RBP7.5□□□□□ -1.21
LMO3-209ENST00000447609 RTL5Q5HYW3 569 aaPredicted RBP7.5□□□□□ -1.21
LMO3-209ENST00000447609 CACNB1Q02641 598 aaPredicted RBP7.49□□□□□ -1.21
LMO3-209ENST00000447609 KDM5BQ9UGL1 1544 aa7.49□□□□□ -1.21
LMO3-209ENST00000447609 FANCAO15360 1455 aa7.49□□□□□ -1.21
LMO3-209ENST00000447609 KIF14Q15058 1648 aa7.49□□□□□ -1.21
LMO3-209ENST00000447609 KANK1Q14678 1352 aa7.49□□□□□ -1.21
LMO3-209ENST00000447609 ANKRD30AQ9BXX3 1397 aa7.49□□□□□ -1.21
LMO3-209ENST00000447609 EHBP1L1Q8N3D4 1523 aa7.49□□□□□ -1.21
LMO3-209ENST00000447609 SHROOM2Q13796 1616 aa7.48□□□□□ -1.21
LMO3-209ENST00000447609 ADGRL1O94910 1474 aa7.48□□□□□ -1.21
LMO3-209ENST00000447609 WASHC2CQ9Y4E1 1318 aa7.48□□□□□ -1.21
LMO3-209ENST00000447609 SLC4A1APQ9BWU0 796 aaKnown RBP7.48□□□□□ -1.21
LMO3-209ENST00000447609 DENND4BO75064 1496 aaPredicted RBP7.48□□□□□ -1.21
LMO3-209ENST00000447609 ABCA8O94911 1581 aa7.48□□□□□ -1.21
LMO3-209ENST00000447609 MYOM3Q5VTT5 1437 aa7.48□□□□□ -1.21
LMO3-209ENST00000447609 AKNAQ7Z591 1439 aa7.47□□□□□ -1.21
LMO3-209ENST00000447609 TIMELESSQ9UNS1 1208 aa7.47□□□□□ -1.21
LMO3-209ENST00000447609 TIAM1Q13009 1591 aa7.47□□□□□ -1.21
LMO3-209ENST00000447609 ABCC10Q5T3U5 1492 aa7.47□□□□□ -1.21
LMO3-209ENST00000447609 TSPOAP1O95153 1857 aa7.46□□□□□ -1.21
LMO3-209ENST00000447609 PLEKHH2Q8IVE3 1493 aa7.46□□□□□ -1.22
LMO3-209ENST00000447609 PHLDB1Q86UU1 1377 aa7.46□□□□□ -1.22
LMO3-209ENST00000447609 ZNF326Q5BKZ1 582 aaKnown RBP7.46□□□□□ -1.22
LMO3-209ENST00000447609 PLCH2O75038 1416 aa7.46□□□□□ -1.22
LMO3-209ENST00000447609 PPP1R15AO75807 674 aaPredicted RBP7.45□□□□□ -1.22
LMO3-209ENST00000447609 ZCCHC11Q5TAX3 1644 aaKnown RBP7.45□□□□□ -1.22
LMO3-209ENST00000447609 ADCY10Q96PN6 1610 aa7.45□□□□□ -1.22
LMO3-209ENST00000447609 FGD6Q6ZV73 1430 aa7.45□□□□□ -1.22
LMO3-209ENST00000447609 POGZQ7Z3K3 1410 aa7.44□□□□□ -1.22
LMO3-209ENST00000447609 SUPT6HQ7KZ85 1726 aaKnown RBP7.44□□□□□ -1.22
LMO3-209ENST00000447609 PPP4R2Q9NY27 417 aa7.43□□□□□ -1.22
LMO3-209ENST00000447609 NOP58Q9Y2X3 529 aaKnown RBP7.43□□□□□ -1.22
LMO3-209ENST00000447609 KIF15Q9NS87 1388 aa7.42□□□□□ -1.22
LMO3-209ENST00000447609 GPATCH8Q9UKJ3 1502 aaKnown RBP7.42□□□□□ -1.22
LMO3-209ENST00000447609 MIA2Q96PC5 1412 aa7.42□□□□□ -1.22
LMO3-209ENST00000447609 NUP155O75694 1391 aa7.42□□□□□ -1.22
LMO3-209ENST00000447609 ANP32AP39687 249 aaKnown RBP7.42□□□□□ -1.22
LMO3-209ENST00000447609 DDX10Q13206 875 aaKnown RBP7.41□□□□□ -1.22
LMO3-209ENST00000447609 RGL3Q3MIN7 710 aa7.41□□□□□ -1.22
LMO3-209ENST00000447609 RRBP1Q9P2E9 1410 aaKnown RBP7.41□□□□□ -1.22
LMO3-209ENST00000447609 MAPKBP1O60336 1514 aa7.4□□□□□ -1.23
LMO3-209ENST00000447609 C9orf84Q5VXU9 1444 aa7.39□□□□□ -1.23
LMO3-209ENST00000447609 CCDC141Q6ZP82 1450 aa7.39□□□□□ -1.23
LMO3-209ENST00000447609 NEO1Q92859 1461 aa7.39□□□□□ -1.23
LMO3-209ENST00000447609 KDM2AQ9Y2K7 1162 aa7.39□□□□□ -1.23
LMO3-209ENST00000447609 MAP3K1Q13233 1512 aa7.38□□□□□ -1.23
LMO3-209ENST00000447609 CAMSAP2Q08AD1 1489 aa7.38□□□□□ -1.23
LMO3-209ENST00000447609 DCAF8L1A6NGE4 600 aa7.38□□□□□ -1.23
LMO3-209ENST00000447609 PKD2Q13563 968 aa7.38□□□□□ -1.23
LMO3-209ENST00000447609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms