RNA–Protein interactions for RNA: ENST00000424549.7

NPIPA1-202, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 3

Gene NPIPA1, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-202ENST00000424549 ABCA8O94911 1581 aa12.44□□□□□ -0.42
NPIPA1-202ENST00000424549 UBAP1LF5GYI3 381 aa12.44□□□□□ -0.42
NPIPA1-202ENST00000424549 RTN4Q9NQC3 1192 aaKnown RBP12.44□□□□□ -0.42
NPIPA1-202ENST00000424549 FANCAO15360 1455 aa12.44□□□□□ -0.42
NPIPA1-202ENST00000424549 CEBPAP49715 358 aaPredicted RBP12.43□□□□□ -0.42
NPIPA1-202ENST00000424549 NEO1Q92859 1461 aa12.42□□□□□ -0.42
NPIPA1-202ENST00000424549 CARMIL1Q5VZK9 1371 aa12.42□□□□□ -0.42
NPIPA1-202ENST00000424549 POGZQ7Z3K3 1410 aa12.41□□□□□ -0.42
NPIPA1-202ENST00000424549 PHLDB1Q86UU1 1377 aa12.41□□□□□ -0.42
NPIPA1-202ENST00000424549 HSPA1LP34931 641 aa12.4□□□□□ -0.42
NPIPA1-202ENST00000424549 CACNB1Q02641 598 aaPredicted RBP12.4□□□□□ -0.42
NPIPA1-202ENST00000424549 UHRF1BP1Q6BDS2 1440 aa12.39□□□□□ -0.43
NPIPA1-202ENST00000424549 KIF27Q86VH2 1401 aa12.39□□□□□ -0.43
NPIPA1-202ENST00000424549 ARID3CA6NKF2 412 aa12.39□□□□□ -0.43
NPIPA1-202ENST00000424549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.39□□□□□ -0.43
NPIPA1-202ENST00000424549 ARHGEF12Q9NZN5 1544 aa12.38□□□□□ -0.43
NPIPA1-202ENST00000424549 AKNAQ7Z591 1439 aa12.37□□□□□ -0.43
NPIPA1-202ENST00000424549 ZFYVE16Q7Z3T8 1539 aa12.37□□□□□ -0.43
NPIPA1-202ENST00000424549 ZNF335Q9H4Z2 1342 aaPredicted RBP12.35□□□□□ -0.43
NPIPA1-202ENST00000424549 DENND4BO75064 1496 aaPredicted RBP12.34□□□□□ -0.43
NPIPA1-202ENST00000424549 ZMYM4Q5VZL5 1548 aa12.34□□□□□ -0.43
NPIPA1-202ENST00000424549 SETD1BQ9UPS6 1966 aaKnown RBP12.34□□□□□ -0.43
NPIPA1-202ENST00000424549 NCOA1Q15788 1441 aa12.33□□□□□ -0.44
NPIPA1-202ENST00000424549 FHOD3Q2V2M9 1422 aa12.33□□□□□ -0.44
NPIPA1-202ENST00000424549 EFCAB5A4FU69 1503 aa12.32□□□□□ -0.44
NPIPA1-202ENST00000424549 ATP10BO94823 1461 aa12.32□□□□□ -0.44
NPIPA1-202ENST00000424549 C1QBPQ07021 282 aaKnown RBP12.3□□□□□ -0.44
NPIPA1-202ENST00000424549 HECW1Q76N89 1606 aa12.29□□□□□ -0.44
NPIPA1-202ENST00000424549 C3P01024 1663 aa12.29□□□□□ -0.44
NPIPA1-202ENST00000424549 PIP4K2BP78356 416 aa12.29□□□□□ -0.44
NPIPA1-202ENST00000424549 SETD1AO15047 1707 aaKnown RBP12.27□□□□□ -0.45
NPIPA1-202ENST00000424549 RGS17Q9UGC6 210 aaPredicted RBP12.26□□□□□ -0.45
NPIPA1-202ENST00000424549 CAMSAP1Q5T5Y3 1602 aa12.26□□□□□ -0.45
NPIPA1-202ENST00000424549 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
NPIPA1-202ENST00000424549 CTTNBP2Q8WZ74 1663 aa12.25□□□□□ -0.45
NPIPA1-202ENST00000424549 ZBTB22O15209 634 aa12.24□□□□□ -0.45
NPIPA1-202ENST00000424549 CFAP74Q9C0B2 1584 aa12.22□□□□□ -0.45
NPIPA1-202ENST00000424549 MAGI2Q86UL8 1455 aa12.22□□□□□ -0.45
NPIPA1-202ENST00000424549 NCKAP5LQ9HCH0 1330 aa12.22□□□□□ -0.45
NPIPA1-202ENST00000424549 ALKQ9UM73 1620 aa12.22□□□□□ -0.45
NPIPA1-202ENST00000424549 C9orf84Q5VXU9 1444 aa12.21□□□□□ -0.45
NPIPA1-202ENST00000424549 RAPGEF2Q9Y4G8 1499 aa12.21□□□□□ -0.46
NPIPA1-202ENST00000424549 SRCAPQ6ZRS2 3230 aa12.2□□□□□ -0.46
NPIPA1-202ENST00000424549 ATP10AO60312 1499 aa12.2□□□□□ -0.46
NPIPA1-202ENST00000424549 GOLGA3Q08378 1498 aa12.2□□□□□ -0.46
NPIPA1-202ENST00000424549 SLC4A2P04920 1241 aa12.19□□□□□ -0.46
NPIPA1-202ENST00000424549 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
NPIPA1-202ENST00000424549 TRAPPC8Q9Y2L5 1435 aa12.16□□□□□ -0.46
NPIPA1-202ENST00000424549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.16□□□□□ -0.46
NPIPA1-202ENST00000424549 POTEAQ6S8J7 498 aa12.15□□□□□ -0.46
NPIPA1-202ENST00000424549 SUPT6HQ7KZ85 1726 aaKnown RBP12.14□□□□□ -0.47
NPIPA1-202ENST00000424549 RAPGEF6Q8TEU7 1601 aa12.13□□□□□ -0.47
NPIPA1-202ENST00000424549 TOM1O60784 492 aa12.13□□□□□ -0.47
NPIPA1-202ENST00000424549 SCAPERQ9BY12 1400 aa12.12□□□□□ -0.47
NPIPA1-202ENST00000424549 P3H3Q8IVL6 736 aa12.12□□□□□ -0.47
NPIPA1-202ENST00000424549 DIP2CQ9Y2E4 1556 aa12.11□□□□□ -0.47
NPIPA1-202ENST00000424549 TCOF1Q13428 1488 aaKnown RBP12.11□□□□□ -0.47
NPIPA1-202ENST00000424549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
NPIPA1-202ENST00000424549 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
NPIPA1-202ENST00000424549 ZNF142P52746 1687 aaPredicted RBP12.1□□□□□ -0.47
NPIPA1-202ENST00000424549 SUPT5HO00267 1087 aaKnown RBP12.1□□□□□ -0.47
NPIPA1-202ENST00000424549 MYO3AQ8NEV4 1616 aa12.1□□□□□ -0.47
NPIPA1-202ENST00000424549 NUP153P49790 1475 aaKnown RBP12.08□□□□□ -0.47
NPIPA1-202ENST00000424549 PLA2R1Q13018 1463 aa12.08□□□□□ -0.48
NPIPA1-202ENST00000424549 ABCA6Q8N139 1617 aa12.08□□□□□ -0.48
NPIPA1-202ENST00000424549 CPS1P31327 1500 aa12.07□□□□□ -0.48
NPIPA1-202ENST00000424549 CEP170BQ9Y4F5 1589 aaPredicted RBP12.05□□□□□ -0.48
NPIPA1-202ENST00000424549 REREQ9P2R6 1566 aa12.05□□□□□ -0.48
NPIPA1-202ENST00000424549 SHANK2Q9UPX8 1470 aa12.04□□□□□ -0.48
NPIPA1-202ENST00000424549 PKD2Q13563 968 aa12.04□□□□□ -0.48
NPIPA1-202ENST00000424549 PTPRKQ15262 1439 aa12.03□□□□□ -0.48
NPIPA1-202ENST00000424549 AGLP35573 1532 aa12.03□□□□□ -0.48
NPIPA1-202ENST00000424549 KDM5CP41229 1560 aa12.03□□□□□ -0.48
NPIPA1-202ENST00000424549 NEURL4Q96JN8 1562 aa12.03□□□□□ -0.48
NPIPA1-202ENST00000424549 MROH2AA6NES4 1674 aa12.03□□□□□ -0.48
NPIPA1-202ENST00000424549 POLR1AO95602 1720 aaPredicted RBP12.03□□□□□ -0.48
NPIPA1-202ENST00000424549 NPATQ14207 1427 aa12.03□□□□□ -0.48
NPIPA1-202ENST00000424549 VWDEQ8N2E2 1590 aa12.02□□□□□ -0.49
NPIPA1-202ENST00000424549 UPF1Q92900 1129 aaKnown RBP eCLIP12.01□□□□□ -0.49
NPIPA1-202ENST00000424549 ESF1Q9H501 851 aaKnown RBP12.01□□□□□ -0.49
NPIPA1-202ENST00000424549 SAMD9Q5K651 1589 aa12□□□□□ -0.49
NPIPA1-202ENST00000424549 STRCP1A6NGW2 1772 aa12□□□□□ -0.49
NPIPA1-202ENST00000424549 PLCH2O75038 1416 aa11.99□□□□□ -0.49
NPIPA1-202ENST00000424549 RNF17Q9BXT8 1623 aaKnown RBP11.98□□□□□ -0.49
NPIPA1-202ENST00000424549 ZNF518AQ6AHZ1 1483 aa11.98□□□□□ -0.49
NPIPA1-202ENST00000424549 CNTLNQ9NXG0 1405 aa11.98□□□□□ -0.49
NPIPA1-202ENST00000424549 PLEKHD1A6NEE1 506 aa11.98□□□□□ -0.49
NPIPA1-202ENST00000424549 AFAP1Q8N556 730 aa11.98□□□□□ -0.49
NPIPA1-202ENST00000424549 MYO5CQ9NQX4 1742 aa11.97□□□□□ -0.49
NPIPA1-202ENST00000424549 CLTCQ00610 1675 aaKnown RBP11.97□□□□□ -0.49
NPIPA1-202ENST00000424549 MYT1LQ9UL68 1186 aa11.96□□□□□ -0.49
NPIPA1-202ENST00000424549 DNMT1P26358 1616 aaKnown RBP11.96□□□□□ -0.5
NPIPA1-202ENST00000424549 ZMYM3Q14202 1370 aa11.95□□□□□ -0.5
NPIPA1-202ENST00000424549 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
NPIPA1-202ENST00000424549 CDK13Q14004 1512 aaKnown RBP11.94□□□□□ -0.5
NPIPA1-202ENST00000424549 KIDINS220Q9ULH0 1771 aa11.92□□□□□ -0.5
NPIPA1-202ENST00000424549 LRRC7Q96NW7 1537 aa11.92□□□□□ -0.5
NPIPA1-202ENST00000424549 FAM9AQ8IZU1 332 aaPredicted RBP11.92□□□□□ -0.5
NPIPA1-202ENST00000424549 MLH3Q9UHC1 1453 aa11.91□□□□□ -0.5
NPIPA1-202ENST00000424549 A2ML1A8K2U0 1454 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms