RNA–Protein interactions for RNA: ENST00000424549.7

NPIPA1-202, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 3

Gene NPIPA1, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-202ENST00000424549 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
NPIPA1-202ENST00000424549 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
NPIPA1-202ENST00000424549 NISCHQ9Y2I1 1504 aa18.14■□□□□ 0.49
NPIPA1-202ENST00000424549 ABCC9O60706 1549 aa17.6■□□□□ 0.41
NPIPA1-202ENST00000424549 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
NPIPA1-202ENST00000424549 SENP3Q9H4L4 574 aaPredicted RBP16.85■□□□□ 0.29
NPIPA1-202ENST00000424549 PHF23Q9BUL5 403 aaPredicted RBP16.73■□□□□ 0.27
NPIPA1-202ENST00000424549 CCDC180Q9P1Z9 1646 aa16.67■□□□□ 0.26
NPIPA1-202ENST00000424549 DNAJC5Q9H3Z4 198 aa16.44■□□□□ 0.22
NPIPA1-202ENST00000424549 RB1CC1Q8TDY2 1594 aa16.27■□□□□ 0.2
NPIPA1-202ENST00000424549 PABPN1Q86U42 306 aaKnown RBP eCLIP16.23■□□□□ 0.19
NPIPA1-202ENST00000424549 UNC13AQ9UPW8 1703 aa16.07■□□□□ 0.16
NPIPA1-202ENST00000424549 BICRAQ9NZM4 1560 aa15.95■□□□□ 0.14
NPIPA1-202ENST00000424549 NACADO15069 1562 aa15.92■□□□□ 0.14
NPIPA1-202ENST00000424549 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
NPIPA1-202ENST00000424549 CC2D2AQ9P2K1 1620 aa15.84■□□□□ 0.13
NPIPA1-202ENST00000424549 FOXD1Q16676 465 aa15.71■□□□□ 0.11
NPIPA1-202ENST00000424549 DCAF8L2P0C7V8 631 aa15.67■□□□□ 0.1
NPIPA1-202ENST00000424549 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.08
NPIPA1-202ENST00000424549 SHROOM4Q9ULL8 1493 aa15.45■□□□□ 0.06
NPIPA1-202ENST00000424549 CUX2O14529 1486 aa15.44■□□□□ 0.06
NPIPA1-202ENST00000424549 TRIM41Q8WV44 630 aa15.42■□□□□ 0.06
NPIPA1-202ENST00000424549 MYO15BQ96JP2 1530 aa15.36■□□□□ 0.05
NPIPA1-202ENST00000424549 PLPPR3Q6T4P5 718 aa15.29■□□□□ 0.04
NPIPA1-202ENST00000424549 SCRIBQ14160 1630 aa15.22■□□□□ 0.03
NPIPA1-202ENST00000424549 ERCC6Q03468 1493 aa15.19■□□□□ 0.02
NPIPA1-202ENST00000424549 THOC2Q8NI27 1593 aaKnown RBP14.92□□□□□ -0.02
NPIPA1-202ENST00000424549 NESP48681 1621 aa14.9□□□□□ -0.02
NPIPA1-202ENST00000424549 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
NPIPA1-202ENST00000424549 ZCCHC6Q5VYS8 1495 aaKnown RBP14.87□□□□□ -0.03
NPIPA1-202ENST00000424549 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
NPIPA1-202ENST00000424549 ADRA2BP18089 450 aa14.84□□□□□ -0.03
NPIPA1-202ENST00000424549 SMARCA2P51531 1590 aa14.76□□□□□ -0.05
NPIPA1-202ENST00000424549 PIAS4Q8N2W9 510 aaPredicted RBP14.73□□□□□ -0.05
NPIPA1-202ENST00000424549 NCAPD3P42695 1498 aa14.7□□□□□ -0.06
NPIPA1-202ENST00000424549 KIF21AQ7Z4S6 1674 aa14.69□□□□□ -0.06
NPIPA1-202ENST00000424549 BAZ1AQ9NRL2 1556 aaPredicted RBP14.68□□□□□ -0.06
NPIPA1-202ENST00000424549 RIMBP3CA6NJZ7 1639 aa14.6□□□□□ -0.07
NPIPA1-202ENST00000424549 RIMBP3BA6NNM3 1639 aa14.6□□□□□ -0.07
NPIPA1-202ENST00000424549 RIMBP3Q9UFD9 1639 aa14.6□□□□□ -0.07
NPIPA1-202ENST00000424549 ATAD2BQ9ULI0 1458 aa14.58□□□□□ -0.08
NPIPA1-202ENST00000424549 MSH5O43196 834 aa14.58□□□□□ -0.08
NPIPA1-202ENST00000424549 HMGXB3Q12766 1538 aa14.55□□□□□ -0.08
NPIPA1-202ENST00000424549 LAMC3Q9Y6N6 1575 aa14.54□□□□□ -0.08
NPIPA1-202ENST00000424549 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
NPIPA1-202ENST00000424549 WDR62O43379 1518 aa14.45□□□□□ -0.1
NPIPA1-202ENST00000424549 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
NPIPA1-202ENST00000424549 MRC2Q9UBG0 1479 aa14.44□□□□□ -0.1
NPIPA1-202ENST00000424549 PDS5BQ9NTI5 1447 aa14.43□□□□□ -0.1
NPIPA1-202ENST00000424549 ARHGEF11O15085 1522 aa14.43□□□□□ -0.1
NPIPA1-202ENST00000424549 SMARCA4P51532 1647 aa14.39□□□□□ -0.11
NPIPA1-202ENST00000424549 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
NPIPA1-202ENST00000424549 CYB5RLQ6IPT4 315 aa14.32□□□□□ -0.12
NPIPA1-202ENST00000424549 ILDR1Q86SU0 546 aaPredicted RBP14.27□□□□□ -0.13
NPIPA1-202ENST00000424549 ARAP1Q96P48 1450 aa14.25□□□□□ -0.13
NPIPA1-202ENST00000424549 CADPSQ9ULU8 1353 aa14.22□□□□□ -0.13
NPIPA1-202ENST00000424549 PEG3Q9GZU2 1588 aa14.2□□□□□ -0.14
NPIPA1-202ENST00000424549 CEP164Q9UPV0 1460 aa14.19□□□□□ -0.14
NPIPA1-202ENST00000424549 FANCD2Q9BXW9 1451 aa14.11□□□□□ -0.15
NPIPA1-202ENST00000424549 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
NPIPA1-202ENST00000424549 ZNF608Q9ULD9 1512 aaPredicted RBP14.09□□□□□ -0.15
NPIPA1-202ENST00000424549 CHD1O14646 1710 aa14.06□□□□□ -0.16
NPIPA1-202ENST00000424549 MROH2BQ7Z745 1585 aa14.03□□□□□ -0.16
NPIPA1-202ENST00000424549 RSF1Q96T23 1441 aaPredicted RBP13.97□□□□□ -0.17
NPIPA1-202ENST00000424549 EIF4G3O43432 1585 aaKnown RBP13.96□□□□□ -0.17
NPIPA1-202ENST00000424549 IFT140Q96RY7 1462 aa13.92□□□□□ -0.18
NPIPA1-202ENST00000424549 CFTRP13569 1480 aa13.89□□□□□ -0.19
NPIPA1-202ENST00000424549 POTEDQ86YR6 584 aa13.89□□□□□ -0.19
NPIPA1-202ENST00000424549 WIZO95785 1651 aa13.85□□□□□ -0.19
NPIPA1-202ENST00000424549 FBLN2P98095 1184 aa13.84□□□□□ -0.19
NPIPA1-202ENST00000424549 CLASP1Q7Z460 1538 aa13.83□□□□□ -0.2
NPIPA1-202ENST00000424549 AQRO60306 1485 aaKnown RBP eCLIP13.8□□□□□ -0.2
NPIPA1-202ENST00000424549 KDM4FA0A1W2PPD8 638 aa13.78□□□□□ -0.2
NPIPA1-202ENST00000424549 TOPBP1Q92547 1522 aa13.76□□□□□ -0.21
NPIPA1-202ENST00000424549 PRDM2Q13029 1718 aa13.76□□□□□ -0.21
NPIPA1-202ENST00000424549 TARBP1Q13395 1621 aaKnown RBP13.74□□□□□ -0.21
NPIPA1-202ENST00000424549 KIF13AQ9H1H9 1805 aa13.74□□□□□ -0.21
NPIPA1-202ENST00000424549 GAPVD1Q14C86 1478 aa13.72□□□□□ -0.21
NPIPA1-202ENST00000424549 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
NPIPA1-202ENST00000424549 SNAPC4Q5SXM2 1469 aa13.65□□□□□ -0.22
NPIPA1-202ENST00000424549 ERCC6L2Q5T890 1561 aa13.63□□□□□ -0.23
NPIPA1-202ENST00000424549 DNMBPQ6XZF7 1577 aa13.62□□□□□ -0.23
NPIPA1-202ENST00000424549 HECW2Q9P2P5 1572 aa13.61□□□□□ -0.23
NPIPA1-202ENST00000424549 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
NPIPA1-202ENST00000424549 MAPK8IP2Q13387 824 aaPredicted RBP13.58□□□□□ -0.24
NPIPA1-202ENST00000424549 TDRD9Q8NDG6 1382 aaKnown RBP13.57□□□□□ -0.24
NPIPA1-202ENST00000424549 POLA1P09884 1462 aaPredicted RBP13.56□□□□□ -0.24
NPIPA1-202ENST00000424549 RAD54L2Q9Y4B4 1467 aa13.56□□□□□ -0.24
NPIPA1-202ENST00000424549 CHMP7Q8WUX9 453 aaPredicted RBP13.54□□□□□ -0.24
NPIPA1-202ENST00000424549 TOP2AP11388 1531 aaKnown RBP13.54□□□□□ -0.24
NPIPA1-202ENST00000424549 ABCC8Q09428 1581 aa13.53□□□□□ -0.24
NPIPA1-202ENST00000424549 KDM6BO15054 1643 aa13.53□□□□□ -0.24
NPIPA1-202ENST00000424549 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.25
NPIPA1-202ENST00000424549 FBXO41Q8TF61 875 aa13.51□□□□□ -0.25
NPIPA1-202ENST00000424549 MAGI1Q96QZ7 1491 aaPredicted RBP13.5□□□□□ -0.25
NPIPA1-202ENST00000424549 LMTK3Q96Q04 1460 aa13.49□□□□□ -0.25
NPIPA1-202ENST00000424549 SYNJ2O15056 1496 aa13.48□□□□□ -0.25
NPIPA1-202ENST00000424549 ADGRL1O94910 1474 aa13.47□□□□□ -0.25
NPIPA1-202ENST00000424549 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
NPIPA1-202ENST00000424549 TSPOAP1O95153 1857 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms