RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 WDR97A6NE52 1622 aa8.5□□□□□ -1.05
CHD2-202ENST00000420239 TULP1O00294 542 aaPredicted RBP8.49□□□□□ -1.05
CHD2-202ENST00000420239 IRX6P78412 446 aaPredicted RBP8.49□□□□□ -1.05
CHD2-202ENST00000420239 ERICH6BQ5W0A0 696 aa8.49□□□□□ -1.05
CHD2-202ENST00000420239 RAB3GAP2Q9H2M9 1393 aa8.49□□□□□ -1.05
CHD2-202ENST00000420239 BCL11BQ9C0K0 894 aaPredicted RBP8.49□□□□□ -1.05
CHD2-202ENST00000420239 CREBZFQ9NS37 354 aa8.49□□□□□ -1.05
CHD2-202ENST00000420239 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.48□□□□□ -1.05
CHD2-202ENST00000420239 RASEFQ8IZ41 740 aa8.48□□□□□ -1.05
CHD2-202ENST00000420239 CCDC136Q96JN2 1154 aa8.48□□□□□ -1.05
CHD2-202ENST00000420239 ZFP91Q96JP5 570 aaPredicted RBP8.48□□□□□ -1.05
CHD2-202ENST00000420239 BICRAQ9NZM4 1560 aa8.48□□□□□ -1.05
CHD2-202ENST00000420239 SETD5Q9C0A6 1442 aa8.48□□□□□ -1.05
CHD2-202ENST00000420239 STK24Q9Y6E0 443 aa8.48□□□□□ -1.05
CHD2-202ENST00000420239 ARHGAP35Q9NRY4 1499 aa8.47□□□□□ -1.05
CHD2-202ENST00000420239 PAK3O75914 559 aaPredicted RBP8.46□□□□□ -1.05
CHD2-202ENST00000420239 SPDYE1Q8NFV5 336 aaPredicted RBP8.46□□□□□ -1.05
CHD2-202ENST00000420239 NOP58Q9Y2X3 529 aaKnown RBP8.46□□□□□ -1.05
CHD2-202ENST00000420239 ATAD2BQ9ULI0 1458 aa8.46□□□□□ -1.06
CHD2-202ENST00000420239 CHRM1P11229 460 aaPredicted RBP8.45□□□□□ -1.06
CHD2-202ENST00000420239 TIAM1Q13009 1591 aa8.45□□□□□ -1.06
CHD2-202ENST00000420239 IL27Q8NEV9 243 aa8.45□□□□□ -1.06
CHD2-202ENST00000420239 SGIP1Q9BQI5 828 aa8.45□□□□□ -1.06
CHD2-202ENST00000420239 ANP32CO43423 234 aa8.44□□□□□ -1.06
CHD2-202ENST00000420239 CLEC11AQ9Y240 323 aa8.44□□□□□ -1.06
CHD2-202ENST00000420239 RANGAP1P46060 587 aaPredicted RBP8.43□□□□□ -1.06
CHD2-202ENST00000420239 PYGBP11216 843 aa8.42□□□□□ -1.06
CHD2-202ENST00000420239 UBE2Q2Q8WVN8 375 aa8.42□□□□□ -1.06
CHD2-202ENST00000420239 HIRIP3Q9BW71 556 aaPredicted RBP8.42□□□□□ -1.06
CHD2-202ENST00000420239 PRR29P0C7W0 189 aa8.41□□□□□ -1.06
CHD2-202ENST00000420239 PPP4R2Q9NY27 417 aa8.41□□□□□ -1.06
CHD2-202ENST00000420239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.41□□□□□ -1.06
CHD2-202ENST00000420239 CFAP43Q8NDM7 1665 aa8.41□□□□□ -1.06
CHD2-202ENST00000420239 KIF27Q86VH2 1401 aa8.41□□□□□ -1.06
CHD2-202ENST00000420239 LRRC9Q6ZRR7 1453 aa8.4□□□□□ -1.06
CHD2-202ENST00000420239 SIN3AQ96ST3 1273 aa8.4□□□□□ -1.06
CHD2-202ENST00000420239 RYDENQ9NUL5 291 aaKnown RBP8.4□□□□□ -1.06
CHD2-202ENST00000420239 HNRNPUQ00839 825 aaKnown RBP eCLIP8.39□□□□□ -1.07
CHD2-202ENST00000420239 CUX1P39880 1505 aa8.38□□□□□ -1.07
CHD2-202ENST00000420239 B4GALNT3Q6L9W6 998 aa8.38□□□□□ -1.07
CHD2-202ENST00000420239 P3H3Q8IVL6 736 aa8.38□□□□□ -1.07
CHD2-202ENST00000420239 AKT1S1Q96B36 256 aa8.38□□□□□ -1.07
CHD2-202ENST00000420239 CADPS2Q86UW7 1296 aa8.37□□□□□ -1.07
CHD2-202ENST00000420239 KCNV2Q8TDN2 545 aa8.37□□□□□ -1.07
CHD2-202ENST00000420239 TMEM132AQ24JP5 1023 aa8.35□□□□□ -1.07
CHD2-202ENST00000420239 PHLDB1Q86UU1 1377 aa8.35□□□□□ -1.07
CHD2-202ENST00000420239 FHAD1B1AJZ9 1412 aa8.35□□□□□ -1.07
CHD2-202ENST00000420239 RTL5Q5HYW3 569 aaPredicted RBP8.34□□□□□ -1.07
CHD2-202ENST00000420239 WASHC2AQ641Q2 1341 aa8.34□□□□□ -1.07
CHD2-202ENST00000420239 REM2Q8IYK8 340 aaPredicted RBP8.34□□□□□ -1.07
CHD2-202ENST00000420239 RBM42Q9BTD8 480 aaKnown RBP8.33□□□□□ -1.08
CHD2-202ENST00000420239 KDM5BQ9UGL1 1544 aa8.33□□□□□ -1.08
CHD2-202ENST00000420239 IPO9Q96P70 1041 aaKnown RBP8.33□□□□□ -1.08
CHD2-202ENST00000420239 LMOD2Q6P5Q4 547 aa8.32□□□□□ -1.08
CHD2-202ENST00000420239 DAXXQ9UER7 740 aaPredicted RBP8.32□□□□□ -1.08
CHD2-202ENST00000420239 NCOA2Q15596 1464 aa8.32□□□□□ -1.08
CHD2-202ENST00000420239 HMGXB3Q12766 1538 aa8.31□□□□□ -1.08
CHD2-202ENST00000420239 PRDM2Q13029 1718 aa8.31□□□□□ -1.08
CHD2-202ENST00000420239 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.31□□□□□ -1.08
CHD2-202ENST00000420239 AQRO60306 1485 aaKnown RBP eCLIP8.3□□□□□ -1.088e-8■■■□□ 15.4
CHD2-202ENST00000420239 NCAPD3P42695 1498 aa8.3□□□□□ -1.08
CHD2-202ENST00000420239 C11orf95C9JLR9 678 aaPredicted RBP8.3□□□□□ -1.08
CHD2-202ENST00000420239 UACAQ9BZF9 1416 aa8.3□□□□□ -1.08
CHD2-202ENST00000420239 PCF11O94913 1555 aaKnown RBP8.29□□□□□ -1.08
CHD2-202ENST00000420239 ANP32AP39687 249 aaKnown RBP8.29□□□□□ -1.08
CHD2-202ENST00000420239 CCDC184Q52MB2 194 aa8.29□□□□□ -1.08
CHD2-202ENST00000420239 IGF1RP08069 1367 aa8.29□□□□□ -1.08
CHD2-202ENST00000420239 WASHC2CQ9Y4E1 1318 aa8.29□□□□□ -1.08
CHD2-202ENST00000420239 WDR70Q9NW82 654 aa8.29□□□□□ -1.08
CHD2-202ENST00000420239 TONSLQ96HA7 1378 aa8.28□□□□□ -1.08
CHD2-202ENST00000420239 CFTRP13569 1480 aa8.28□□□□□ -1.08
CHD2-202ENST00000420239 PTPN23Q9H3S7 1636 aa8.28□□□□□ -1.08
CHD2-202ENST00000420239 FYCO1Q9BQS8 1478 aa8.28□□□□□ -1.08
CHD2-202ENST00000420239 HFM1A2PYH4 1435 aa8.28□□□□□ -1.08
CHD2-202ENST00000420239 CCDC18Q5T9S5 1454 aa8.27□□□□□ -1.09
CHD2-202ENST00000420239 PITPNM1O00562 1244 aa8.26□□□□□ -1.09
CHD2-202ENST00000420239 EFCAB5A4FU69 1503 aa8.26□□□□□ -1.09
CHD2-202ENST00000420239 ZNF467Q7Z7K2 595 aaPredicted RBP8.26□□□□□ -1.09
CHD2-202ENST00000420239 BRPF3Q9ULD4 1205 aa8.26□□□□□ -1.09
CHD2-202ENST00000420239 FGD5Q6ZNL6 1462 aa8.26□□□□□ -1.09
CHD2-202ENST00000420239 CASKIN1Q8WXD9 1431 aa8.25□□□□□ -1.09
CHD2-202ENST00000420239 CNTLNQ9NXG0 1405 aa8.25□□□□□ -1.09
CHD2-202ENST00000420239 ZBED9Q6R2W3 1325 aa8.25□□□□□ -1.09
CHD2-202ENST00000420239 MFRPQ9BY79 579 aa8.25□□□□□ -1.09
CHD2-202ENST00000420239 POLR1AO95602 1720 aaPredicted RBP8.25□□□□□ -1.09
CHD2-202ENST00000420239 ABCA5Q8WWZ7 1642 aa8.25□□□□□ -1.09
CHD2-202ENST00000420239 PDAP1Q13442 181 aaKnown RBP8.25□□□□□ -1.09
CHD2-202ENST00000420239 FAM50AQ14320 339 aaKnown RBP8.25□□□□□ -1.09
CHD2-202ENST00000420239 TSPYL2Q9H2G4 693 aaPredicted RBP8.25□□□□□ -1.09
CHD2-202ENST00000420239 FGD6Q6ZV73 1430 aa8.24□□□□□ -1.09
CHD2-202ENST00000420239 CARMIL1Q5VZK9 1371 aa8.24□□□□□ -1.09
CHD2-202ENST00000420239 PCDHB8Q9UN66 801 aa8.24□□□□□ -1.09
CHD2-202ENST00000420239 LAS1LQ9Y4W2 734 aaKnown RBP8.24□□□□□ -1.09
CHD2-202ENST00000420239 PCDHB13Q9Y5F0 798 aa8.24□□□□□ -1.09
CHD2-202ENST00000420239 RNF123Q5XPI4 1314 aa8.24□□□□□ -1.09
CHD2-202ENST00000420239 BRPF1P55201 1214 aaPredicted RBP8.23□□□□□ -1.09
CHD2-202ENST00000420239 AKNAQ7Z591 1439 aa8.23□□□□□ -1.09
CHD2-202ENST00000420239 NEFMP07197 916 aa8.23□□□□□ -1.09
CHD2-202ENST00000420239 NAIPQ13075 1403 aa8.22□□□□□ -1.09
CHD2-202ENST00000420239 HECW1Q76N89 1606 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms