RNA–Protein interactions for RNA: ENST00000397174.6

SCMH1-209, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCMH1, Length 2,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-209ENST00000397174 AQRO60306 1485 aaKnown RBP eCLIP13.84□□□□□ -0.19
SCMH1-209ENST00000397174 CUX1P39880 1505 aa13.81□□□□□ -0.2
SCMH1-209ENST00000397174 CFAP43Q8NDM7 1665 aa13.8□□□□□ -0.2
SCMH1-209ENST00000397174 PTPN23Q9H3S7 1636 aa13.8□□□□□ -0.2
SCMH1-209ENST00000397174 HSP90AA2PQ14568 343 aaPredicted RBP13.8□□□□□ -0.2
SCMH1-209ENST00000397174 KIF7Q2M1P5 1343 aa13.79□□□□□ -0.2
SCMH1-209ENST00000397174 ATP1B4Q9UN42 357 aaPredicted RBP13.79□□□□□ -0.2
SCMH1-209ENST00000397174 HFM1A2PYH4 1435 aa13.79□□□□□ -0.2
SCMH1-209ENST00000397174 KIF27Q86VH2 1401 aa13.79□□□□□ -0.2
SCMH1-209ENST00000397174 NAP1L5Q96NT1 182 aaPredicted RBP13.79□□□□□ -0.2
SCMH1-209ENST00000397174 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.79□□□□□ -0.2
SCMH1-209ENST00000397174 PTPRKQ15262 1439 aa13.78□□□□□ -0.2
SCMH1-209ENST00000397174 RRP9O43818 475 aaKnown RBP13.76□□□□□ -0.21
SCMH1-209ENST00000397174 PCF11O94913 1555 aaKnown RBP13.76□□□□□ -0.21
SCMH1-209ENST00000397174 HSP90AA1P07900 732 aaKnown RBP13.75□□□□□ -0.21
SCMH1-209ENST00000397174 P3H3Q8IVL6 736 aa13.75□□□□□ -0.21
SCMH1-209ENST00000397174 RCAN3Q9UKA8 241 aa13.75□□□□□ -0.21
SCMH1-209ENST00000397174 ABCA5Q8WWZ7 1642 aa13.74□□□□□ -0.21
SCMH1-209ENST00000397174 POGKQ9P215 609 aa13.74□□□□□ -0.21
SCMH1-209ENST00000397174 NAIPQ13075 1403 aa13.74□□□□□ -0.21
SCMH1-209ENST00000397174 CFTRP13569 1480 aa13.74□□□□□ -0.21
SCMH1-209ENST00000397174 DHX29Q7Z478 1369 aaKnown RBP13.73□□□□□ -0.21
SCMH1-209ENST00000397174 FGD6Q6ZV73 1430 aa13.73□□□□□ -0.21
SCMH1-209ENST00000397174 PNISRQ8TF01 805 aaKnown RBP13.73□□□□□ -0.21
SCMH1-209ENST00000397174 L3MBTL2Q969R5 705 aa13.73□□□□□ -0.21
SCMH1-209ENST00000397174 HMGXB3Q12766 1538 aa13.73□□□□□ -0.21
SCMH1-209ENST00000397174 PNNQ9H307 717 aaKnown RBP13.71□□□□□ -0.21
SCMH1-209ENST00000397174 FMN1Q68DA7 1419 aa13.71□□□□□ -0.21
SCMH1-209ENST00000397174 DENND4BO75064 1496 aaPredicted RBP13.7□□□□□ -0.22
SCMH1-209ENST00000397174 NBPF8Q3BBV2 869 aa13.69□□□□□ -0.22
SCMH1-209ENST00000397174 TMC1Q8TDI8 760 aa13.69□□□□□ -0.22
SCMH1-209ENST00000397174 POLR3GLQ9BT43 218 aa13.68□□□□□ -0.22
SCMH1-209ENST00000397174 PLIN1O60240 522 aa13.68□□□□□ -0.22
SCMH1-209ENST00000397174 POLR1AO95602 1720 aaPredicted RBP13.68□□□□□ -0.22
SCMH1-209ENST00000397174 L1TD1Q5T7N2 865 aaKnown RBP13.67□□□□□ -0.22
SCMH1-209ENST00000397174 SPATA31E1Q6ZUB1 1445 aa13.67□□□□□ -0.22
SCMH1-209ENST00000397174 ARXQ96QS3 562 aa13.67□□□□□ -0.22
SCMH1-209ENST00000397174 CRBNQ96SW2 442 aa13.67□□□□□ -0.22
SCMH1-209ENST00000397174 CADPSQ9ULU8 1353 aa13.67□□□□□ -0.22
SCMH1-209ENST00000397174 IGF1RP08069 1367 aa13.66□□□□□ -0.22
SCMH1-209ENST00000397174 CLCN1P35523 988 aa13.65□□□□□ -0.22
SCMH1-209ENST00000397174 C8orf34Q49A92 452 aa13.65□□□□□ -0.22
SCMH1-209ENST00000397174 FAM161AQ3B820 660 aa13.64□□□□□ -0.23
SCMH1-209ENST00000397174 FOXD1Q16676 465 aa13.64□□□□□ -0.23
SCMH1-209ENST00000397174 LRPPRCP42704 1394 aaKnown RBP13.63□□□□□ -0.23
SCMH1-209ENST00000397174 RRP7BPQ9NSQ0 103 aa13.63□□□□□ -0.23
SCMH1-209ENST00000397174 HECW1Q76N89 1606 aa13.62□□□□□ -0.23
SCMH1-209ENST00000397174 FHOD3Q2V2M9 1422 aa13.61□□□□□ -0.23
SCMH1-209ENST00000397174 CARMIL1Q5VZK9 1371 aa13.61□□□□□ -0.23
SCMH1-209ENST00000397174 FYCO1Q9BQS8 1478 aa13.61□□□□□ -0.23
SCMH1-209ENST00000397174 XRCC6P12956 609 aaKnown RBP eCLIP13.61□□□□□ -0.23
SCMH1-209ENST00000397174 KTN1Q86UP2 1357 aaKnown RBP13.61□□□□□ -0.23
SCMH1-209ENST00000397174 KDM2BQ8NHM5 1336 aa13.61□□□□□ -0.23
SCMH1-209ENST00000397174 CDCA7LQ96GN5 454 aa13.6□□□□□ -0.23
SCMH1-209ENST00000397174 FGD5Q6ZNL6 1462 aa13.6□□□□□ -0.23
SCMH1-209ENST00000397174 PANK2Q9BZ23 570 aa13.59□□□□□ -0.23
SCMH1-209ENST00000397174 MPHOSPH9Q99550 1183 aa13.59□□□□□ -0.23
SCMH1-209ENST00000397174 A0A0U1RQG5 324 aaPredicted RBP13.59□□□□□ -0.23
SCMH1-209ENST00000397174 ARID4BQ4LE39 1312 aaPredicted RBP13.58□□□□□ -0.23
SCMH1-209ENST00000397174 CHIC2Q9UKJ5 165 aa13.58□□□□□ -0.24
SCMH1-209ENST00000397174 NESP48681 1621 aa13.58□□□□□ -0.24
SCMH1-209ENST00000397174 C20orf194Q5TEA3 1177 aa13.57□□□□□ -0.24
SCMH1-209ENST00000397174 CASKIN1Q8WXD9 1431 aa13.57□□□□□ -0.24
SCMH1-209ENST00000397174 TEX14Q8IWB6 1497 aa13.57□□□□□ -0.24
SCMH1-209ENST00000397174 KDM6BO15054 1643 aa13.57□□□□□ -0.24
SCMH1-209ENST00000397174 BCORL1Q5H9F3 1711 aa13.57□□□□□ -0.24
SCMH1-209ENST00000397174 RAD54L2Q9Y4B4 1467 aa13.57□□□□□ -0.24
SCMH1-209ENST00000397174 GOLGA6L3A6NEY3 463 aa13.56□□□□□ -0.24
SCMH1-209ENST00000397174 RBM10P98175 930 aaKnown RBP13.56□□□□□ -0.24
SCMH1-209ENST00000397174 SLKQ9H2G2 1235 aaPredicted RBP13.56□□□□□ -0.24
SCMH1-209ENST00000397174 MTUS2Q5JR59 1369 aa13.56□□□□□ -0.24
SCMH1-209ENST00000397174 PDE3BQ13370 1112 aa13.56□□□□□ -0.24
SCMH1-209ENST00000397174 CENPQQ7L2Z9 268 aaPredicted RBP13.56□□□□□ -0.24
SCMH1-209ENST00000397174 MYOM3Q5VTT5 1437 aa13.56□□□□□ -0.24
SCMH1-209ENST00000397174 RGS3P49796 1198 aa13.55□□□□□ -0.24
SCMH1-209ENST00000397174 MIA2Q96PC5 1412 aa13.55□□□□□ -0.24
SCMH1-209ENST00000397174 BRD4O60885 1362 aaPredicted RBP13.54□□□□□ -0.24
SCMH1-209ENST00000397174 FSD2A1L4K1 749 aa13.54□□□□□ -0.24
SCMH1-209ENST00000397174 RPRD2Q5VT52 1461 aaKnown RBP13.54□□□□□ -0.24
SCMH1-209ENST00000397174 FANCD2Q9BXW9 1451 aa13.54□□□□□ -0.24
SCMH1-209ENST00000397174 MYBBP1AQ9BQG0 1328 aaKnown RBP13.53□□□□□ -0.24
SCMH1-209ENST00000397174 GCC2Q8IWJ2 1684 aa13.53□□□□□ -0.24
SCMH1-209ENST00000397174 GZF1Q9H116 711 aaPredicted RBP13.52□□□□□ -0.25
SCMH1-209ENST00000397174 USP47Q96K76 1375 aa13.52□□□□□ -0.25
SCMH1-209ENST00000397174 PRDM4Q9UKN5 801 aa13.51□□□□□ -0.25
SCMH1-209ENST00000397174 KIF15Q9NS87 1388 aa13.51□□□□□ -0.25
SCMH1-209ENST00000397174 USP19O94966 1318 aa13.51□□□□□ -0.25
SCMH1-209ENST00000397174 ERBB4Q15303 1308 aa13.51□□□□□ -0.25
SCMH1-209ENST00000397174 PDCL3Q9H2J4 239 aa13.5□□□□□ -0.25
SCMH1-209ENST00000397174 ANKRD30BQ9BXX2 1392 aa13.5□□□□□ -0.25
SCMH1-209ENST00000397174 CALD1Q05682 793 aaKnown RBP13.5□□□□□ -0.25
SCMH1-209ENST00000397174 AAMPQ13685 434 aa13.5□□□□□ -0.25
SCMH1-209ENST00000397174 CENPJQ9HC77 1338 aaPredicted RBP13.49□□□□□ -0.25
SCMH1-209ENST00000397174 ESPNB1AK53 854 aa13.49□□□□□ -0.25
SCMH1-209ENST00000397174 TPM2P07951 284 aa13.48□□□□□ -0.25
SCMH1-209ENST00000397174 BECN1Q14457 450 aa13.48□□□□□ -0.25
SCMH1-209ENST00000397174 ANTXR1Q9H6X2 564 aa13.48□□□□□ -0.25
SCMH1-209ENST00000397174 ZNF326Q5BKZ1 582 aaKnown RBP13.47□□□□□ -0.25
SCMH1-209ENST00000397174 TDRD9Q8NDG6 1382 aaKnown RBP13.47□□□□□ -0.25
SCMH1-209ENST00000397174 RALBP1Q15311 655 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms