RNA–Protein interactions for RNA: ENST00000397174.6

SCMH1-209, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCMH1, Length 2,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-209ENST00000397174 NISCHQ9Y2I1 1504 aa19■□□□□ 0.63
SCMH1-209ENST00000397174 HRCP23327 699 aa17.87■□□□□ 0.45
SCMH1-209ENST00000397174 PELP1Q8IZL8 1130 aaKnown RBP17.65■□□□□ 0.42
SCMH1-209ENST00000397174 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
SCMH1-209ENST00000397174 PCGF6Q9BYE7 350 aa17.35■□□□□ 0.37
SCMH1-209ENST00000397174 MYO15BQ96JP2 1530 aa17.13■□□□□ 0.33
SCMH1-209ENST00000397174 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
SCMH1-209ENST00000397174 SUPT5HO00267 1087 aaKnown RBP17.05■□□□□ 0.32
SCMH1-209ENST00000397174 MYT1Q01538 1121 aa17.04■□□□□ 0.32
SCMH1-209ENST00000397174 SHROOM4Q9ULL8 1493 aa17.02■□□□□ 0.31
SCMH1-209ENST00000397174 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
SCMH1-209ENST00000397174 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
SCMH1-209ENST00000397174 TRIM26Q12899 539 aaPredicted RBP16.68■□□□□ 0.26
SCMH1-209ENST00000397174 CCDC180Q9P1Z9 1646 aa16.66■□□□□ 0.26
SCMH1-209ENST00000397174 ZEB1P37275 1124 aaPredicted RBP16.62■□□□□ 0.25
SCMH1-209ENST00000397174 ACIN1Q9UKV3 1341 aaKnown RBP16.56■□□□□ 0.24
SCMH1-209ENST00000397174 LOC105371045A0A1W2PR82 267 aa16.55■□□□□ 0.24
SCMH1-209ENST00000397174 NEUROD1Q13562 356 aa16.52■□□□□ 0.23
SCMH1-209ENST00000397174 GTF3C3Q9Y5Q9 886 aa16.45■□□□□ 0.22
SCMH1-209ENST00000397174 DCAF8L2P0C7V8 631 aa16.31■□□□□ 0.2
SCMH1-209ENST00000397174 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.2
SCMH1-209ENST00000397174 DIEXFQ68CQ4 756 aaKnown RBP16.1■□□□□ 0.17
SCMH1-209ENST00000397174 ZCCHC6Q5VYS8 1495 aaKnown RBP16.09■□□□□ 0.17
SCMH1-209ENST00000397174 TTBK1Q5TCY1 1321 aaPredicted RBP16.06■□□□□ 0.16
SCMH1-209ENST00000397174 BCL11AQ9H165 835 aa15.99■□□□□ 0.15
SCMH1-209ENST00000397174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
SCMH1-209ENST00000397174 CCER1Q8TC90 406 aaPredicted RBP15.93■□□□□ 0.14
SCMH1-209ENST00000397174 YTHDC1Q96MU7 727 aaKnown RBP15.91■□□□□ 0.14
SCMH1-209ENST00000397174 FAM9AQ8IZU1 332 aaPredicted RBP15.89■□□□□ 0.13
SCMH1-209ENST00000397174 TRIM41Q8WV44 630 aa15.83■□□□□ 0.12
SCMH1-209ENST00000397174 ANP32EQ9BTT0 268 aa15.78■□□□□ 0.12
SCMH1-209ENST00000397174 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
SCMH1-209ENST00000397174 ZNF316A6NFI3 1004 aaPredicted RBP15.71■□□□□ 0.11
SCMH1-209ENST00000397174 SLC24A1O60721 1099 aa15.69■□□□□ 0.1
SCMH1-209ENST00000397174 MIER1Q8N108 512 aa15.68■□□□□ 0.1
SCMH1-209ENST00000397174 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
SCMH1-209ENST00000397174 TSHZ2Q9NRE2 1034 aa15.61■□□□□ 0.09
SCMH1-209ENST00000397174 ABCC9O60706 1549 aa15.59■□□□□ 0.09
SCMH1-209ENST00000397174 SUPT16HQ9Y5B9 1047 aaKnown RBP15.58■□□□□ 0.09
SCMH1-209ENST00000397174 PRKCSHP14314 528 aaPredicted RBP15.57■□□□□ 0.08
SCMH1-209ENST00000397174 AEBP2Q6ZN18 517 aaPredicted RBP15.54■□□□□ 0.08
SCMH1-209ENST00000397174 CLSPNQ9HAW4 1339 aa15.47■□□□□ 0.07
SCMH1-209ENST00000397174 RB1CC1Q8TDY2 1594 aa15.33■□□□□ 0.05
SCMH1-209ENST00000397174 RSF1Q96T23 1441 aaPredicted RBP15.31■□□□□ 0.04
SCMH1-209ENST00000397174 SCRIBQ14160 1630 aa15.26■□□□□ 0.03
SCMH1-209ENST00000397174 WRNQ14191 1432 aaPredicted RBP eCLIP15.25■□□□□ 0.03
SCMH1-209ENST00000397174 BCANQ96GW7 911 aa15.23■□□□□ 0.03
SCMH1-209ENST00000397174 RBM19Q9Y4C8 960 aaKnown RBP15.2■□□□□ 0.02
SCMH1-209ENST00000397174 ERICH6Q7L0X2 663 aa15.15■□□□□ 0.02
SCMH1-209ENST00000397174 HNRNPUL2Q1KMD3 747 aaKnown RBP15.13■□□□□ 0.01
SCMH1-209ENST00000397174 MSH5O43196 834 aa15.12■□□□□ 0.01
SCMH1-209ENST00000397174 CEP162Q5TB80 1403 aa15.12■□□□□ 0.01
SCMH1-209ENST00000397174 FKBP8Q14318 412 aa15.1■□□□□ 0.01
SCMH1-209ENST00000397174 KCNH8Q96L42 1107 aa15.03■□□□□ -0
SCMH1-209ENST00000397174 ITGAEP38570 1179 aa15□□□□□ -0.01
SCMH1-209ENST00000397174 CECR2Q9BXF3 1484 aa14.99□□□□□ -0.01
SCMH1-209ENST00000397174 APLP2Q06481 763 aa14.98□□□□□ -0.01
SCMH1-209ENST00000397174 ANO8Q9HCE9 1232 aaPredicted RBP14.98□□□□□ -0.01
SCMH1-209ENST00000397174 TNIKQ9UKE5 1360 aa14.96□□□□□ -0.01
SCMH1-209ENST00000397174 DEKP35659 375 aaKnown RBP14.93□□□□□ -0.02
SCMH1-209ENST00000397174 NEFLP07196 543 aa14.92□□□□□ -0.02
SCMH1-209ENST00000397174 FANCIQ9NVI1 1328 aa14.91□□□□□ -0.02
SCMH1-209ENST00000397174 UBTFP17480 764 aaKnown RBP14.87□□□□□ -0.03
SCMH1-209ENST00000397174 ABCC8Q09428 1581 aa14.87□□□□□ -0.03
SCMH1-209ENST00000397174 MYT1LQ9UL68 1186 aa14.87□□□□□ -0.03
SCMH1-209ENST00000397174 MROH2BQ7Z745 1585 aa14.86□□□□□ -0.03
SCMH1-209ENST00000397174 NACADO15069 1562 aa14.86□□□□□ -0.03
SCMH1-209ENST00000397174 EIF4G1Q04637 1599 aaKnown RBP14.86□□□□□ -0.03
SCMH1-209ENST00000397174 CCDC88BA6NC98 1476 aa14.86□□□□□ -0.03
SCMH1-209ENST00000397174 DHX57Q6P158 1386 aaKnown RBP14.85□□□□□ -0.03
SCMH1-209ENST00000397174 SOGA1O94964 1423 aa14.83□□□□□ -0.04
SCMH1-209ENST00000397174 SALL2Q9Y467 1007 aaPredicted RBP14.81□□□□□ -0.04
SCMH1-209ENST00000397174 PABPN1Q86U42 306 aaKnown RBP eCLIP14.77□□□□□ -0.05
SCMH1-209ENST00000397174 WIZO95785 1651 aa14.76□□□□□ -0.05
SCMH1-209ENST00000397174 CDK11AQ9UQ88 783 aaPredicted RBP14.76□□□□□ -0.05
SCMH1-209ENST00000397174 TRIM52Q96A61 297 aa14.75□□□□□ -0.05
SCMH1-209ENST00000397174 RUSC2Q8N2Y8 1516 aa14.74□□□□□ -0.05
SCMH1-209ENST00000397174 CCDC136Q96JN2 1154 aa14.73□□□□□ -0.05
SCMH1-209ENST00000397174 GOLGA3Q08378 1498 aa14.73□□□□□ -0.05
SCMH1-209ENST00000397174 ERICH6BQ5W0A0 696 aa14.7□□□□□ -0.06
SCMH1-209ENST00000397174 DDX10Q13206 875 aaKnown RBP14.69□□□□□ -0.06
SCMH1-209ENST00000397174 NBR1Q14596 966 aa14.69□□□□□ -0.06
SCMH1-209ENST00000397174 EEA1Q15075 1411 aa14.68□□□□□ -0.06
SCMH1-209ENST00000397174 CLIP1P30622 1438 aa14.67□□□□□ -0.06
SCMH1-209ENST00000397174 IRX6P78412 446 aaPredicted RBP14.66□□□□□ -0.06
SCMH1-209ENST00000397174 VPS8Q8N3P4 1428 aa14.66□□□□□ -0.06
SCMH1-209ENST00000397174 BAZ1AQ9NRL2 1556 aaPredicted RBP14.64□□□□□ -0.07
SCMH1-209ENST00000397174 NOP58Q9Y2X3 529 aaKnown RBP14.61□□□□□ -0.07
SCMH1-209ENST00000397174 IL27Q8NEV9 243 aa14.61□□□□□ -0.07
SCMH1-209ENST00000397174 UBE2Q2Q8WVN8 375 aa14.61□□□□□ -0.07
SCMH1-209ENST00000397174 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.61□□□□□ -0.07
SCMH1-209ENST00000397174 RTN4Q9NQC3 1192 aaKnown RBP14.59□□□□□ -0.07
SCMH1-209ENST00000397174 PAK3O75914 559 aaPredicted RBP14.59□□□□□ -0.07
SCMH1-209ENST00000397174 CCER2I3L3R5 266 aa14.58□□□□□ -0.07
SCMH1-209ENST00000397174 PPP1R15AO75807 674 aaPredicted RBP14.58□□□□□ -0.08
SCMH1-209ENST00000397174 ANP32CO43423 234 aa14.54□□□□□ -0.08
SCMH1-209ENST00000397174 CEP164Q9UPV0 1460 aa14.53□□□□□ -0.08
SCMH1-209ENST00000397174 RANGAP1P46060 587 aaPredicted RBP14.53□□□□□ -0.08
SCMH1-209ENST00000397174 WDR97A6NE52 1622 aa14.5□□□□□ -0.09
SCMH1-209ENST00000397174 RTL5Q5HYW3 569 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms