RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 FRAT1Q92837 279 aaPredicted RBP9.67□□□□□ -0.86
TRIM6-202ENST00000380097 FHAD1B1AJZ9 1412 aa9.67□□□□□ -0.86
TRIM6-202ENST00000380097 PHLDB1Q86UU1 1377 aa9.67□□□□□ -0.86
TRIM6-202ENST00000380097 NFKBIBQ15653 356 aa9.66□□□□□ -0.86
TRIM6-202ENST00000380097 ABCA10Q8WWZ4 1543 aa9.66□□□□□ -0.86
TRIM6-202ENST00000380097 CNTLNQ9NXG0 1405 aa9.66□□□□□ -0.86
TRIM6-202ENST00000380097 ZNF777Q9ULD5 760 aaPredicted RBP9.65□□□□□ -0.86
TRIM6-202ENST00000380097 ERICH3Q5RHP9 1530 aa9.65□□□□□ -0.86
TRIM6-202ENST00000380097 SMG6Q86US8 1419 aaKnown RBP9.65□□□□□ -0.86
TRIM6-202ENST00000380097 BACH2Q9BYV9 841 aa9.64□□□□□ -0.87
TRIM6-202ENST00000380097 A0A0U1RQG5 324 aaPredicted RBP9.64□□□□□ -0.87
TRIM6-202ENST00000380097 FAM43AQ8N2R8 423 aa9.63□□□□□ -0.87
TRIM6-202ENST00000380097 RRP7BPQ9NSQ0 103 aa9.63□□□□□ -0.87
TRIM6-202ENST00000380097 ARHGAP35Q9NRY4 1499 aa9.63□□□□□ -0.87
TRIM6-202ENST00000380097 JPH4Q96JJ6 628 aa9.63□□□□□ -0.87
TRIM6-202ENST00000380097 MS4A1P11836 297 aa9.63□□□□□ -0.87
TRIM6-202ENST00000380097 SLC4A3P48751 1232 aa9.62□□□□□ -0.87
TRIM6-202ENST00000380097 ZMYND15Q9H091 742 aa9.62□□□□□ -0.87
TRIM6-202ENST00000380097 SNAPC4Q5SXM2 1469 aa9.62□□□□□ -0.87
TRIM6-202ENST00000380097 EXOC6Q8TAG9 804 aa9.62□□□□□ -0.87
TRIM6-202ENST00000380097 TMC1Q8TDI8 760 aa9.62□□□□□ -0.87
TRIM6-202ENST00000380097 LRRC9Q6ZRR7 1453 aa9.61□□□□□ -0.87
TRIM6-202ENST00000380097 MTUS2Q5JR59 1369 aa9.61□□□□□ -0.87
TRIM6-202ENST00000380097 CCDC7Q96M83 1385 aa9.6□□□□□ -0.87
TRIM6-202ENST00000380097 GRIN2BQ13224 1484 aa9.59□□□□□ -0.87
TRIM6-202ENST00000380097 RNF123Q5XPI4 1314 aa9.59□□□□□ -0.87
TRIM6-202ENST00000380097 IFT140Q96RY7 1462 aa9.59□□□□□ -0.87
TRIM6-202ENST00000380097 CCDC18Q5T9S5 1454 aa9.58□□□□□ -0.88
TRIM6-202ENST00000380097 RRP1P56182 461 aaKnown RBP9.58□□□□□ -0.88
TRIM6-202ENST00000380097 NAP1L5Q96NT1 182 aaPredicted RBP9.58□□□□□ -0.88
TRIM6-202ENST00000380097 UACAQ9BZF9 1416 aa9.58□□□□□ -0.88
TRIM6-202ENST00000380097 TIAM1Q13009 1591 aa9.58□□□□□ -0.88
TRIM6-202ENST00000380097 ABCA5Q8WWZ7 1642 aa9.57□□□□□ -0.88
TRIM6-202ENST00000380097 RCAN3Q9UKA8 241 aa9.57□□□□□ -0.88
TRIM6-202ENST00000380097 THOC2Q8NI27 1593 aaKnown RBP9.57□□□□□ -0.88
TRIM6-202ENST00000380097 WDR62O43379 1518 aa9.56□□□□□ -0.88
TRIM6-202ENST00000380097 FRAT2O75474 233 aaPredicted RBP9.56□□□□□ -0.88
TRIM6-202ENST00000380097 HSP90AA2PQ14568 343 aaPredicted RBP9.56□□□□□ -0.88
TRIM6-202ENST00000380097 ZNF326Q5BKZ1 582 aaKnown RBP9.56□□□□□ -0.88
TRIM6-202ENST00000380097 L3MBTL2Q969R5 705 aa9.55□□□□□ -0.88
TRIM6-202ENST00000380097 FOXD1Q16676 465 aa9.55□□□□□ -0.88
TRIM6-202ENST00000380097 CUL7Q14999 1698 aa9.54□□□□□ -0.88
TRIM6-202ENST00000380097 HSP90AA1P07900 732 aaKnown RBP9.54□□□□□ -0.88
TRIM6-202ENST00000380097 ARXQ96QS3 562 aa9.54□□□□□ -0.88
TRIM6-202ENST00000380097 MAP3K1Q13233 1512 aa9.54□□□□□ -0.88
TRIM6-202ENST00000380097 KIF7Q2M1P5 1343 aa9.54□□□□□ -0.88
TRIM6-202ENST00000380097 NCOA2Q15596 1464 aa9.54□□□□□ -0.88
TRIM6-202ENST00000380097 PNNQ9H307 717 aaKnown RBP9.53□□□□□ -0.88
TRIM6-202ENST00000380097 DCAF11Q8TEB1 546 aa9.52□□□□□ -0.89
TRIM6-202ENST00000380097 TARBP1Q13395 1621 aaKnown RBP9.52□□□□□ -0.89
TRIM6-202ENST00000380097 NCOA1Q15788 1441 aa9.52□□□□□ -0.89
TRIM6-202ENST00000380097 FMN1Q68DA7 1419 aa9.52□□□□□ -0.89
TRIM6-202ENST00000380097 L1TD1Q5T7N2 865 aaKnown RBP9.52□□□□□ -0.89
TRIM6-202ENST00000380097 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.51□□□□□ -0.89
TRIM6-202ENST00000380097 SKAP1Q86WV1 359 aa9.5□□□□□ -0.89
TRIM6-202ENST00000380097 PNISRQ8TF01 805 aaKnown RBP9.5□□□□□ -0.89
TRIM6-202ENST00000380097 HFM1A2PYH4 1435 aa9.5□□□□□ -0.89
TRIM6-202ENST00000380097 PLIN1O60240 522 aa9.49□□□□□ -0.89
TRIM6-202ENST00000380097 FGD6Q6ZV73 1430 aa9.48□□□□□ -0.89
TRIM6-202ENST00000380097 ZNF644Q9H582 1327 aaPredicted RBP9.48□□□□□ -0.89
TRIM6-202ENST00000380097 PLEKHD1A6NEE1 506 aa9.48□□□□□ -0.89
TRIM6-202ENST00000380097 EIF4G3O43432 1585 aaKnown RBP9.48□□□□□ -0.89
TRIM6-202ENST00000380097 RRP9O43818 475 aaKnown RBP9.48□□□□□ -0.89
TRIM6-202ENST00000380097 FAM161AQ3B820 660 aa9.48□□□□□ -0.89
TRIM6-202ENST00000380097 RRAGDQ9NQL2 400 aaPredicted RBP9.48□□□□□ -0.89
TRIM6-202ENST00000380097 GRIN2AQ12879 1464 aa9.48□□□□□ -0.89
TRIM6-202ENST00000380097 PDE4CQ08493 712 aa9.47□□□□□ -0.89
TRIM6-202ENST00000380097 MPHOSPH9Q99550 1183 aa9.47□□□□□ -0.89
TRIM6-202ENST00000380097 CRBNQ96SW2 442 aa9.47□□□□□ -0.89
TRIM6-202ENST00000380097 RGS3P49796 1198 aa9.46□□□□□ -0.89
TRIM6-202ENST00000380097 NAIPQ13075 1403 aa9.46□□□□□ -0.9
TRIM6-202ENST00000380097 PDE3BQ13370 1112 aa9.46□□□□□ -0.9
TRIM6-202ENST00000380097 NBPF8Q3BBV2 869 aa9.46□□□□□ -0.9
TRIM6-202ENST00000380097 POGKQ9P215 609 aa9.46□□□□□ -0.9
TRIM6-202ENST00000380097 PRG4Q92954 1404 aaPredicted RBP9.45□□□□□ -0.9
TRIM6-202ENST00000380097 BECN1Q14457 450 aa9.45□□□□□ -0.9
TRIM6-202ENST00000380097 CYB5RLQ6IPT4 315 aa9.44□□□□□ -0.9
TRIM6-202ENST00000380097 CFDP1Q9UEE9 299 aaPredicted RBP9.44□□□□□ -0.9
TRIM6-202ENST00000380097 PBRM1Q86U86 1689 aa9.44□□□□□ -0.9
TRIM6-202ENST00000380097 SYNJ2O15056 1496 aa9.44□□□□□ -0.9
TRIM6-202ENST00000380097 PLB1Q6P1J6 1458 aa9.44□□□□□ -0.9
TRIM6-202ENST00000380097 SLKQ9H2G2 1235 aaPredicted RBP9.44□□□□□ -0.9
TRIM6-202ENST00000380097 PTPRGP23470 1445 aa9.44□□□□□ -0.9
TRIM6-202ENST00000380097 CDK13Q14004 1512 aaKnown RBP9.43□□□□□ -0.9
TRIM6-202ENST00000380097 OSCARQ8IYS5 282 aa9.43□□□□□ -0.9
TRIM6-202ENST00000380097 CARMIL2Q6F5E8 1435 aa9.43□□□□□ -0.9
TRIM6-202ENST00000380097 GOLGA6L3A6NEY3 463 aa9.43□□□□□ -0.9
TRIM6-202ENST00000380097 PTPRKQ15262 1439 aa9.43□□□□□ -0.9
TRIM6-202ENST00000380097 CTTNBP2Q8WZ74 1663 aa9.43□□□□□ -0.9
TRIM6-202ENST00000380097 CENPQQ7L2Z9 268 aaPredicted RBP9.43□□□□□ -0.9
TRIM6-202ENST00000380097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRIM6-202ENST00000380097 RBM10P98175 930 aaKnown RBP9.42□□□□□ -0.9
TRIM6-202ENST00000380097 ARID4BQ4LE39 1312 aaPredicted RBP9.42□□□□□ -0.9
TRIM6-202ENST00000380097 PCF11O94913 1555 aaKnown RBP9.42□□□□□ -0.9
TRIM6-202ENST00000380097 KTN1Q86UP2 1357 aaKnown RBP9.42□□□□□ -0.9
TRIM6-202ENST00000380097 PTPN23Q9H3S7 1636 aa9.42□□□□□ -0.9
TRIM6-202ENST00000380097 KIAA0586Q9BVV6 1533 aa9.41□□□□□ -0.9
TRIM6-202ENST00000380097 CDCA7LQ96GN5 454 aa9.41□□□□□ -0.9
TRIM6-202ENST00000380097 KDM5BQ9UGL1 1544 aa9.41□□□□□ -0.9
TRIM6-202ENST00000380097 ADAMTS12P58397 1594 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 192.7 ms