RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 NISCHQ9Y2I1 1504 aa13.67□□□□□ -0.22
TRIM6-202ENST00000380097 DCAF8L2P0C7V8 631 aa12.31□□□□□ -0.44
TRIM6-202ENST00000380097 CCDC180Q9P1Z9 1646 aa12.28□□□□□ -0.44
TRIM6-202ENST00000380097 HRCP23327 699 aa12.25□□□□□ -0.45
TRIM6-202ENST00000380097 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
TRIM6-202ENST00000380097 SHROOM4Q9ULL8 1493 aa12.08□□□□□ -0.48
TRIM6-202ENST00000380097 PCGF6Q9BYE7 350 aa12.02□□□□□ -0.49
TRIM6-202ENST00000380097 PPARGC1BQ86YN6 1023 aaKnown RBP11.99□□□□□ -0.49
TRIM6-202ENST00000380097 SUPT5HO00267 1087 aaKnown RBP11.92□□□□□ -0.5
TRIM6-202ENST00000380097 MYT1Q01538 1121 aa11.84□□□□□ -0.51
TRIM6-202ENST00000380097 DCAF1Q9Y4B6 1507 aa11.66□□□□□ -0.54
TRIM6-202ENST00000380097 ABCC9O60706 1549 aa11.66□□□□□ -0.54
TRIM6-202ENST00000380097 MYO15BQ96JP2 1530 aa11.66□□□□□ -0.54
TRIM6-202ENST00000380097 CHIC1Q5VXU3 224 aa11.64□□□□□ -0.55
TRIM6-202ENST00000380097 SCAF1Q9H7N4 1312 aaKnown RBP11.64□□□□□ -0.55
TRIM6-202ENST00000380097 ZEB1P37275 1124 aaPredicted RBP11.57□□□□□ -0.56
TRIM6-202ENST00000380097 TRIM26Q12899 539 aaPredicted RBP11.55□□□□□ -0.56
TRIM6-202ENST00000380097 LOC105371045A0A1W2PR82 267 aa11.44□□□□□ -0.58
TRIM6-202ENST00000380097 ZCCHC6Q5VYS8 1495 aaKnown RBP11.4□□□□□ -0.58
TRIM6-202ENST00000380097 ACIN1Q9UKV3 1341 aaKnown RBP11.37□□□□□ -0.59
TRIM6-202ENST00000380097 CENPBP07199 599 aaPredicted RBP11.35□□□□□ -0.59
TRIM6-202ENST00000380097 GTF3C3Q9Y5Q9 886 aa11.33□□□□□ -0.6
TRIM6-202ENST00000380097 NEUROD1Q13562 356 aa11.31□□□□□ -0.6
TRIM6-202ENST00000380097 EHMT2Q96KQ7 1210 aa11.28□□□□□ -0.6
TRIM6-202ENST00000380097 PABPN1Q86U42 306 aaKnown RBP eCLIP11.27□□□□□ -0.61
TRIM6-202ENST00000380097 TTBK1Q5TCY1 1321 aaPredicted RBP11.18□□□□□ -0.62
TRIM6-202ENST00000380097 SCRIBQ14160 1630 aa11.17□□□□□ -0.62
TRIM6-202ENST00000380097 DIEXFQ68CQ4 756 aaKnown RBP11.15□□□□□ -0.62
TRIM6-202ENST00000380097 CCER1Q8TC90 406 aaPredicted RBP11.13□□□□□ -0.63
TRIM6-202ENST00000380097 FAM9AQ8IZU1 332 aaPredicted RBP11.09□□□□□ -0.63
TRIM6-202ENST00000380097 NACADO15069 1562 aa11.07□□□□□ -0.64
TRIM6-202ENST00000380097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.06□□□□□ -0.64
TRIM6-202ENST00000380097 YTHDC1Q96MU7 727 aaKnown RBP11.06□□□□□ -0.64
TRIM6-202ENST00000380097 BCL11AQ9H165 835 aa11.03□□□□□ -0.64
TRIM6-202ENST00000380097 TRIM41Q8WV44 630 aa11□□□□□ -0.65
TRIM6-202ENST00000380097 PRKCSHP14314 528 aaPredicted RBP10.97□□□□□ -0.65
TRIM6-202ENST00000380097 RB1CC1Q8TDY2 1594 aa10.92□□□□□ -0.66
TRIM6-202ENST00000380097 CECR2Q9BXF3 1484 aa10.88□□□□□ -0.67
TRIM6-202ENST00000380097 ZNF316A6NFI3 1004 aaPredicted RBP10.87□□□□□ -0.67
TRIM6-202ENST00000380097 UNC13AQ9UPW8 1703 aa10.84□□□□□ -0.67
TRIM6-202ENST00000380097 ANP32EQ9BTT0 268 aa10.83□□□□□ -0.68
TRIM6-202ENST00000380097 MIER1Q8N108 512 aa10.8□□□□□ -0.68
TRIM6-202ENST00000380097 ERICH6Q7L0X2 663 aa10.78□□□□□ -0.68
TRIM6-202ENST00000380097 RSF1Q96T23 1441 aaPredicted RBP10.77□□□□□ -0.69
TRIM6-202ENST00000380097 CLSPNQ9HAW4 1339 aa10.71□□□□□ -0.69
TRIM6-202ENST00000380097 MROH2BQ7Z745 1585 aa10.71□□□□□ -0.7
TRIM6-202ENST00000380097 RANGAP1P46060 587 aaPredicted RBP10.7□□□□□ -0.7
TRIM6-202ENST00000380097 SUPT16HQ9Y5B9 1047 aaKnown RBP10.69□□□□□ -0.7
TRIM6-202ENST00000380097 CSRNP3Q8WYN3 585 aa10.68□□□□□ -0.7
TRIM6-202ENST00000380097 TSHZ2Q9NRE2 1034 aa10.67□□□□□ -0.7
TRIM6-202ENST00000380097 PEG3Q9GZU2 1588 aa10.67□□□□□ -0.7
TRIM6-202ENST00000380097 WIZO95785 1651 aa10.6□□□□□ -0.71
TRIM6-202ENST00000380097 HNRNPUL2Q1KMD3 747 aaKnown RBP10.56□□□□□ -0.72
TRIM6-202ENST00000380097 BCANQ96GW7 911 aa10.56□□□□□ -0.72
TRIM6-202ENST00000380097 BICRAQ9NZM4 1560 aa10.56□□□□□ -0.72
TRIM6-202ENST00000380097 BAZ1AQ9NRL2 1556 aaPredicted RBP10.52□□□□□ -0.73
TRIM6-202ENST00000380097 UBTFP17480 764 aaKnown RBP10.5□□□□□ -0.73
TRIM6-202ENST00000380097 NEFLP07196 543 aa10.49□□□□□ -0.73
TRIM6-202ENST00000380097 APLP2Q06481 763 aa10.49□□□□□ -0.73
TRIM6-202ENST00000380097 DNAJC5BQ9UF47 199 aa10.48□□□□□ -0.73
TRIM6-202ENST00000380097 FKBP8Q14318 412 aa10.46□□□□□ -0.73
TRIM6-202ENST00000380097 RBM19Q9Y4C8 960 aaKnown RBP10.45□□□□□ -0.74
TRIM6-202ENST00000380097 SMARCA4P51532 1647 aa10.45□□□□□ -0.74
TRIM6-202ENST00000380097 WRNQ14191 1432 aaPredicted RBP eCLIP10.43□□□□□ -0.74
TRIM6-202ENST00000380097 CCDC88BA6NC98 1476 aa10.43□□□□□ -0.74
TRIM6-202ENST00000380097 SMARCA2P51531 1590 aa10.42□□□□□ -0.74
TRIM6-202ENST00000380097 BAZ1BQ9UIG0 1483 aaKnown RBP10.42□□□□□ -0.74
TRIM6-202ENST00000380097 CEP162Q5TB80 1403 aa10.42□□□□□ -0.74
TRIM6-202ENST00000380097 ATAD2BQ9ULI0 1458 aa10.4□□□□□ -0.74
TRIM6-202ENST00000380097 PRDM2Q13029 1718 aa10.4□□□□□ -0.74
TRIM6-202ENST00000380097 EIF4G1Q04637 1599 aaKnown RBP10.38□□□□□ -0.75
TRIM6-202ENST00000380097 ITGAEP38570 1179 aa10.36□□□□□ -0.75
TRIM6-202ENST00000380097 ABCC8Q09428 1581 aa10.34□□□□□ -0.75
TRIM6-202ENST00000380097 MYT1LQ9UL68 1186 aa10.33□□□□□ -0.76
TRIM6-202ENST00000380097 TNIKQ9UKE5 1360 aa10.33□□□□□ -0.76
TRIM6-202ENST00000380097 TOP2AP11388 1531 aaKnown RBP10.31□□□□□ -0.76
TRIM6-202ENST00000380097 ANO8Q9HCE9 1232 aaPredicted RBP10.3□□□□□ -0.76
TRIM6-202ENST00000380097 KCNH8Q96L42 1107 aa10.3□□□□□ -0.76
TRIM6-202ENST00000380097 CDK11AQ9UQ88 783 aaPredicted RBP10.3□□□□□ -0.76
TRIM6-202ENST00000380097 MSH5O43196 834 aa10.28□□□□□ -0.76
TRIM6-202ENST00000380097 HMGXB3Q12766 1538 aa10.28□□□□□ -0.76
TRIM6-202ENST00000380097 DEKP35659 375 aaKnown RBP10.27□□□□□ -0.77
TRIM6-202ENST00000380097 ATP1B4Q9UN42 357 aaPredicted RBP10.25□□□□□ -0.77
TRIM6-202ENST00000380097 TRIM52Q96A61 297 aa10.25□□□□□ -0.77
TRIM6-202ENST00000380097 FANCIQ9NVI1 1328 aa10.23□□□□□ -0.77
TRIM6-202ENST00000380097 CC2D2AQ9P2K1 1620 aa10.23□□□□□ -0.77
TRIM6-202ENST00000380097 DDX10Q13206 875 aaKnown RBP10.22□□□□□ -0.77
TRIM6-202ENST00000380097 SOGA1O94964 1423 aa10.22□□□□□ -0.77
TRIM6-202ENST00000380097 NCAPD3P42695 1498 aa10.19□□□□□ -0.78
TRIM6-202ENST00000380097 CCDC136Q96JN2 1154 aa10.19□□□□□ -0.78
TRIM6-202ENST00000380097 RUSC2Q8N2Y8 1516 aa10.19□□□□□ -0.78
TRIM6-202ENST00000380097 DHX57Q6P158 1386 aaKnown RBP10.19□□□□□ -0.78
TRIM6-202ENST00000380097 NBR1Q14596 966 aa10.18□□□□□ -0.78
TRIM6-202ENST00000380097 ANP32CO43423 234 aa10.18□□□□□ -0.78
TRIM6-202ENST00000380097 NESP48681 1621 aa10.18□□□□□ -0.78
TRIM6-202ENST00000380097 GOLGA3Q08378 1498 aa10.17□□□□□ -0.78
TRIM6-202ENST00000380097 EEA1Q15075 1411 aa10.17□□□□□ -0.78
TRIM6-202ENST00000380097 IRX6P78412 446 aaPredicted RBP10.15□□□□□ -0.78
TRIM6-202ENST00000380097 RTL5Q5HYW3 569 aaPredicted RBP10.15□□□□□ -0.78
TRIM6-202ENST00000380097 CLIP1P30622 1438 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms