RNA–Protein interactions for RNA: ENST00000375394.6

SKIV2L-201, Transcript of Ski2 like RNA helicase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKIV2L, Length 3,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-201ENST00000375394 BICRAQ9NZM4 1560 aa14.51□□□□□ -0.09
SKIV2L-201ENST00000375394 FMN1Q68DA7 1419 aa14.51□□□□□ -0.09
SKIV2L-201ENST00000375394 WDR43Q15061 677 aaKnown RBP eCLIP14.51□□□□□ -0.09
SKIV2L-201ENST00000375394 CNTLNQ9NXG0 1405 aa14.51□□□□□ -0.09
SKIV2L-201ENST00000375394 PEG3Q9GZU2 1588 aa14.5□□□□□ -0.09
SKIV2L-201ENST00000375394 TCERG1O14776 1098 aaKnown RBP14.5□□□□□ -0.09
SKIV2L-201ENST00000375394 NBPF8Q3BBV2 869 aa14.5□□□□□ -0.09
SKIV2L-201ENST00000375394 SPRYD3Q8NCJ5 442 aa14.5□□□□□ -0.09
SKIV2L-201ENST00000375394 RAD54L2Q9Y4B4 1467 aa14.5□□□□□ -0.09
SKIV2L-201ENST00000375394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.49□□□□□ -0.09
SKIV2L-201ENST00000375394 KIF7Q2M1P5 1343 aa14.49□□□□□ -0.09
SKIV2L-201ENST00000375394 RCAN3Q9UKA8 241 aa14.48□□□□□ -0.09
SKIV2L-201ENST00000375394 IL27Q8NEV9 243 aa14.47□□□□□ -0.09
SKIV2L-201ENST00000375394 ST20-MTHFSA0A0A6YYL1 179 aa14.47□□□□□ -0.09
SKIV2L-201ENST00000375394 FGD6Q6ZV73 1430 aa14.45□□□□□ -0.1
SKIV2L-201ENST00000375394 CCDC7Q96M83 1385 aa14.45□□□□□ -0.1
SKIV2L-201ENST00000375394 CHMP7Q8WUX9 453 aaPredicted RBP14.44□□□□□ -0.1
SKIV2L-201ENST00000375394 FRAT1Q92837 279 aaPredicted RBP14.44□□□□□ -0.1
SKIV2L-201ENST00000375394 CDCA7LQ96GN5 454 aa14.43□□□□□ -0.1
SKIV2L-201ENST00000375394 BIVM-ERCC5R4GMW8 1640 aa14.43□□□□□ -0.1
SKIV2L-201ENST00000375394 CUX1P39880 1505 aa14.42□□□□□ -0.1
SKIV2L-201ENST00000375394 FGD5Q6ZNL6 1462 aa14.42□□□□□ -0.1
SKIV2L-201ENST00000375394 HFM1A2PYH4 1435 aa14.41□□□□□ -0.1
SKIV2L-201ENST00000375394 CCDC146Q8IYE0 955 aa14.41□□□□□ -0.1
SKIV2L-201ENST00000375394 PDE4AP27815 886 aa14.4□□□□□ -0.1
SKIV2L-201ENST00000375394 SLKQ9H2G2 1235 aaPredicted RBP14.4□□□□□ -0.1
SKIV2L-201ENST00000375394 UBE2Q2Q8WVN8 375 aa14.4□□□□□ -0.1
SKIV2L-201ENST00000375394 SMG6Q86US8 1419 aaKnown RBP14.4□□□□□ -0.1
SKIV2L-201ENST00000375394 PLEKHG5O94827 1062 aa14.39□□□□□ -0.11
SKIV2L-201ENST00000375394 CADPSQ9ULU8 1353 aa14.38□□□□□ -0.11
SKIV2L-201ENST00000375394 ARID4BQ4LE39 1312 aaPredicted RBP14.38□□□□□ -0.11
SKIV2L-201ENST00000375394 PLEKHD1A6NEE1 506 aa14.37□□□□□ -0.11
SKIV2L-201ENST00000375394 MS4A1P11836 297 aa14.37□□□□□ -0.11
SKIV2L-201ENST00000375394 CFTRP13569 1480 aa14.37□□□□□ -0.11
SKIV2L-201ENST00000375394 CRBNQ96SW2 442 aa14.37□□□□□ -0.11
SKIV2L-201ENST00000375394 CASKIN1Q8WXD9 1431 aa14.36□□□□□ -0.11
SKIV2L-201ENST00000375394 NUP155O75694 1391 aa14.36□□□□□ -0.11
SKIV2L-201ENST00000375394 KNSTRNQ9Y448 316 aa14.36□□□□□ -0.11
SKIV2L-201ENST00000375394 FYCO1Q9BQS8 1478 aa14.35□□□□□ -0.11
SKIV2L-201ENST00000375394 HNRNPMP52272 730 aaKnown RBP eCLIP14.35□□□□□ -0.11
SKIV2L-201ENST00000375394 USP47Q96K76 1375 aa14.35□□□□□ -0.11
SKIV2L-201ENST00000375394 RRP1P56182 461 aaKnown RBP14.35□□□□□ -0.11
SKIV2L-201ENST00000375394 GSE1Q14687 1217 aa14.34□□□□□ -0.11
SKIV2L-201ENST00000375394 GZF1Q9H116 711 aaPredicted RBP14.34□□□□□ -0.11
SKIV2L-201ENST00000375394 PKNOX2Q96KN3 472 aa14.33□□□□□ -0.12
SKIV2L-201ENST00000375394 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.32□□□□□ -0.12
SKIV2L-201ENST00000375394 NAIPQ13075 1403 aa14.32□□□□□ -0.12
SKIV2L-201ENST00000375394 MYOM3Q5VTT5 1437 aa14.32□□□□□ -0.12
SKIV2L-201ENST00000375394 ROCK2O75116 1388 aaKnown RBP14.32□□□□□ -0.12
SKIV2L-201ENST00000375394 BRPF3Q9ULD4 1205 aa14.31□□□□□ -0.12
SKIV2L-201ENST00000375394 GLIPR1L2Q4G1C9 344 aa14.31□□□□□ -0.12
SKIV2L-201ENST00000375394 HSP90AA1P07900 732 aaKnown RBP14.31□□□□□ -0.12
SKIV2L-201ENST00000375394 PODXL2Q9NZ53 605 aa14.31□□□□□ -0.12
SKIV2L-201ENST00000375394 CLUAP1Q96AJ1 413 aa14.3□□□□□ -0.12
SKIV2L-201ENST00000375394 NCOA2Q15596 1464 aa14.3□□□□□ -0.12
SKIV2L-201ENST00000375394 BCL2L13Q9BXK5 485 aa14.3□□□□□ -0.12
SKIV2L-201ENST00000375394 PTPRKQ15262 1439 aa14.29□□□□□ -0.12
SKIV2L-201ENST00000375394 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.121e-6■■■■■ 30.2
SKIV2L-201ENST00000375394 NCOA1Q15788 1441 aa14.29□□□□□ -0.12
SKIV2L-201ENST00000375394 PDE3BQ13370 1112 aa14.29□□□□□ -0.12
SKIV2L-201ENST00000375394 UPF2Q9HAU5 1272 aaKnown RBP14.29□□□□□ -0.12
SKIV2L-201ENST00000375394 PANK3Q9H999 370 aa14.28□□□□□ -0.12
SKIV2L-201ENST00000375394 PCF11O94913 1555 aaKnown RBP14.28□□□□□ -0.12
SKIV2L-201ENST00000375394 BACH2Q9BYV9 841 aa14.27□□□□□ -0.12
SKIV2L-201ENST00000375394 RRP7AQ9Y3A4 280 aaKnown RBP14.27□□□□□ -0.12
SKIV2L-201ENST00000375394 RALBP1Q15311 655 aa14.27□□□□□ -0.13
SKIV2L-201ENST00000375394 SAFB2Q14151 953 aaKnown RBP eCLIP14.27□□□□□ -0.13
SKIV2L-201ENST00000375394 TPRNQ4KMQ1 711 aa14.27□□□□□ -0.13
SKIV2L-201ENST00000375394 KTN1Q86UP2 1357 aaKnown RBP14.27□□□□□ -0.13
SKIV2L-201ENST00000375394 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.13
SKIV2L-201ENST00000375394 CC2D2AQ9P2K1 1620 aa14.27□□□□□ -0.13
SKIV2L-201ENST00000375394 NLRP13Q86W25 1043 aa14.25□□□□□ -0.13
SKIV2L-201ENST00000375394 EFCAB5A4FU69 1503 aa14.25□□□□□ -0.13
SKIV2L-201ENST00000375394 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
SKIV2L-201ENST00000375394 NESP48681 1621 aa14.25□□□□□ -0.13
SKIV2L-201ENST00000375394 PTPN23Q9H3S7 1636 aa14.25□□□□□ -0.13
SKIV2L-201ENST00000375394 NCAPD3P42695 1498 aa14.24□□□□□ -0.13
SKIV2L-201ENST00000375394 NBPF1Q3BBV0 1214 aa14.24□□□□□ -0.13
SKIV2L-201ENST00000375394 PNISRQ8TF01 805 aaKnown RBP14.23□□□□□ -0.13
SKIV2L-201ENST00000375394 MYBBP1AQ9BQG0 1328 aaKnown RBP14.23□□□□□ -0.13
SKIV2L-201ENST00000375394 RSPH6AQ9H0K4 717 aa14.23□□□□□ -0.13
SKIV2L-201ENST00000375394 NFKBIBQ15653 356 aa14.22□□□□□ -0.13
SKIV2L-201ENST00000375394 KIF15Q9NS87 1388 aa14.22□□□□□ -0.13
SKIV2L-201ENST00000375394 TMF1P82094 1093 aa14.22□□□□□ -0.13
SKIV2L-201ENST00000375394 C20orf194Q5TEA3 1177 aa14.22□□□□□ -0.13
SKIV2L-201ENST00000375394 RNF123Q5XPI4 1314 aa14.22□□□□□ -0.13
SKIV2L-201ENST00000375394 CFAP43Q8NDM7 1665 aa14.2□□□□□ -0.14
SKIV2L-201ENST00000375394 BECN1Q14457 450 aa14.2□□□□□ -0.14
SKIV2L-201ENST00000375394 NAP1L5Q96NT1 182 aaPredicted RBP14.19□□□□□ -0.14
SKIV2L-201ENST00000375394 NUTM2DQ5VT03 806 aaPredicted RBP14.19□□□□□ -0.14
SKIV2L-201ENST00000375394 ZBTB7CA1YPR0 619 aa14.19□□□□□ -0.14
SKIV2L-201ENST00000375394 ADAMTS8Q9UP79 889 aa14.18□□□□□ -0.14
SKIV2L-201ENST00000375394 COG6Q9Y2V7 657 aa14.18□□□□□ -0.14
SKIV2L-201ENST00000375394 APAF1O14727 1248 aa14.17□□□□□ -0.14
SKIV2L-201ENST00000375394 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
SKIV2L-201ENST00000375394 WASHC2CQ9Y4E1 1318 aa14.17□□□□□ -0.14
SKIV2L-201ENST00000375394 FRAT2O75474 233 aaPredicted RBP14.17□□□□□ -0.14
SKIV2L-201ENST00000375394 BRD4O60885 1362 aaPredicted RBP14.17□□□□□ -0.14
SKIV2L-201ENST00000375394 U2SURPO15042 1029 aaKnown RBP14.16□□□□□ -0.14
SKIV2L-201ENST00000375394 PLPPR3Q6T4P5 718 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms