RNA–Protein interactions for RNA: ENST00000375394.6

SKIV2L-201, Transcript of Ski2 like RNA helicase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKIV2L, Length 3,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-201ENST00000375394 NISCHQ9Y2I1 1504 aa19.95■□□□□ 0.78
SKIV2L-201ENST00000375394 SUPT5HO00267 1087 aaKnown RBP18.97■□□□□ 0.63
SKIV2L-201ENST00000375394 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
SKIV2L-201ENST00000375394 DCAF8L2P0C7V8 631 aa18.92■□□□□ 0.62
SKIV2L-201ENST00000375394 EHMT2Q96KQ7 1210 aa18.28■□□□□ 0.52
SKIV2L-201ENST00000375394 PCGF6Q9BYE7 350 aa18.24■□□□□ 0.51
SKIV2L-201ENST00000375394 HRCP23327 699 aa17.96■□□□□ 0.47
SKIV2L-201ENST00000375394 PPARGC1BQ86YN6 1023 aaKnown RBP17.93■□□□□ 0.46
SKIV2L-201ENST00000375394 FAM9AQ8IZU1 332 aaPredicted RBP17.82■□□□□ 0.44
SKIV2L-201ENST00000375394 LOC105371045A0A1W2PR82 267 aa17.7■□□□□ 0.42
SKIV2L-201ENST00000375394 TTBK1Q5TCY1 1321 aaPredicted RBP17.66■□□□□ 0.42
SKIV2L-201ENST00000375394 PELP1Q8IZL8 1130 aaKnown RBP17.64■□□□□ 0.41
SKIV2L-201ENST00000375394 CHIC1Q5VXU3 224 aa17.6■□□□□ 0.41
SKIV2L-201ENST00000375394 ZEB1P37275 1124 aaPredicted RBP17.31■□□□□ 0.36
SKIV2L-201ENST00000375394 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
SKIV2L-201ENST00000375394 TRIM26Q12899 539 aaPredicted RBP17.24■□□□□ 0.35
SKIV2L-201ENST00000375394 MYO15BQ96JP2 1530 aa17.17■□□□□ 0.34
SKIV2L-201ENST00000375394 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
SKIV2L-201ENST00000375394 MYT1Q01538 1121 aa17.08■□□□□ 0.32
SKIV2L-201ENST00000375394 DCAF1Q9Y4B6 1507 aa17.08■□□□□ 0.32
SKIV2L-201ENST00000375394 YTHDC1Q96MU7 727 aaKnown RBP17.07■□□□□ 0.32
SKIV2L-201ENST00000375394 RANGAP1P46060 587 aaPredicted RBP17.07■□□□□ 0.32
SKIV2L-201ENST00000375394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.99■□□□□ 0.31
SKIV2L-201ENST00000375394 ZCCHC6Q5VYS8 1495 aaKnown RBP16.88■□□□□ 0.29
SKIV2L-201ENST00000375394 CENPBP07199 599 aaPredicted RBP16.86■□□□□ 0.29
SKIV2L-201ENST00000375394 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
SKIV2L-201ENST00000375394 UBTFP17480 764 aaKnown RBP16.73■□□□□ 0.27
SKIV2L-201ENST00000375394 CCDC180Q9P1Z9 1646 aa16.73■□□□□ 0.27
SKIV2L-201ENST00000375394 ACIN1Q9UKV3 1341 aaKnown RBP16.65■□□□□ 0.26
SKIV2L-201ENST00000375394 GTF3C3Q9Y5Q9 886 aa16.65■□□□□ 0.26
SKIV2L-201ENST00000375394 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.25
SKIV2L-201ENST00000375394 DIEXFQ68CQ4 756 aaKnown RBP16.62■□□□□ 0.25
SKIV2L-201ENST00000375394 APLP2Q06481 763 aa16.58■□□□□ 0.24
SKIV2L-201ENST00000375394 NEUROD1Q13562 356 aa16.52■□□□□ 0.23
SKIV2L-201ENST00000375394 ITGAEP38570 1179 aa16.43■□□□□ 0.22
SKIV2L-201ENST00000375394 ATP1B4Q9UN42 357 aaPredicted RBP16.32■□□□□ 0.2
SKIV2L-201ENST00000375394 ABCC9O60706 1549 aa16.3■□□□□ 0.2
SKIV2L-201ENST00000375394 BCANQ96GW7 911 aa16.23■□□□□ 0.19
SKIV2L-201ENST00000375394 ZNF316A6NFI3 1004 aaPredicted RBP16.2■□□□□ 0.18
SKIV2L-201ENST00000375394 SCRIBQ14160 1630 aa16.18■□□□□ 0.18
SKIV2L-201ENST00000375394 PABPN1Q86U42 306 aaKnown RBP eCLIP16.14■□□□□ 0.172e-6■■■□□ 17.4
SKIV2L-201ENST00000375394 MIER1Q8N108 512 aa16.12■□□□□ 0.17
SKIV2L-201ENST00000375394 CNGB1Q14028 1251 aaPredicted RBP16.09■□□□□ 0.17
SKIV2L-201ENST00000375394 RSF1Q96T23 1441 aaPredicted RBP16.08■□□□□ 0.17
SKIV2L-201ENST00000375394 CSRNP3Q8WYN3 585 aa15.97■□□□□ 0.15
SKIV2L-201ENST00000375394 CLSPNQ9HAW4 1339 aa15.94■□□□□ 0.14
SKIV2L-201ENST00000375394 NEFLP07196 543 aa15.92■□□□□ 0.14
SKIV2L-201ENST00000375394 RB1CC1Q8TDY2 1594 aa15.92■□□□□ 0.14
SKIV2L-201ENST00000375394 ERICH6Q7L0X2 663 aa15.89■□□□□ 0.13
SKIV2L-201ENST00000375394 HIRIP3Q9BW71 556 aaPredicted RBP15.88■□□□□ 0.13
SKIV2L-201ENST00000375394 CECR2Q9BXF3 1484 aa15.86■□□□□ 0.13
SKIV2L-201ENST00000375394 FAM50AQ14320 339 aaKnown RBP15.83■□□□□ 0.12
SKIV2L-201ENST00000375394 BCL11AQ9H165 835 aa15.82■□□□□ 0.12
SKIV2L-201ENST00000375394 PRKCSHP14314 528 aaPredicted RBP15.81■□□□□ 0.12
SKIV2L-201ENST00000375394 POLR3GLQ9BT43 218 aa15.79■□□□□ 0.12
SKIV2L-201ENST00000375394 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
SKIV2L-201ENST00000375394 CEP162Q5TB80 1403 aa15.78■□□□□ 0.12
SKIV2L-201ENST00000375394 DDX10Q13206 875 aaKnown RBP15.73■□□□□ 0.11
SKIV2L-201ENST00000375394 FKBP8Q14318 412 aa15.73■□□□□ 0.11
SKIV2L-201ENST00000375394 TRIM52Q96A61 297 aa15.73■□□□□ 0.11
SKIV2L-201ENST00000375394 SOGA1O94964 1423 aa15.72■□□□□ 0.11
SKIV2L-201ENST00000375394 ANP32EQ9BTT0 268 aa15.7■□□□□ 0.1
SKIV2L-201ENST00000375394 WRNQ14191 1432 aaPredicted RBP eCLIP15.7■□□□□ 0.1
SKIV2L-201ENST00000375394 TNIKQ9UKE5 1360 aa15.69■□□□□ 0.1
SKIV2L-201ENST00000375394 IRX6P78412 446 aaPredicted RBP15.67■□□□□ 0.1
SKIV2L-201ENST00000375394 SUPT16HQ9Y5B9 1047 aaKnown RBP15.66■□□□□ 0.1
SKIV2L-201ENST00000375394 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
SKIV2L-201ENST00000375394 SENP3-EIF4A1A0A087X0R7 540 aa15.63■□□□□ 0.09
SKIV2L-201ENST00000375394 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
SKIV2L-201ENST00000375394 MROH2BQ7Z745 1585 aa15.61■□□□□ 0.09
SKIV2L-201ENST00000375394 EEA1Q15075 1411 aa15.61■□□□□ 0.09
SKIV2L-201ENST00000375394 ARID3CA6NKF2 412 aa15.61■□□□□ 0.09
SKIV2L-201ENST00000375394 KCNH8Q96L42 1107 aa15.59■□□□□ 0.09
SKIV2L-201ENST00000375394 CLIP1P30622 1438 aa15.56■□□□□ 0.08
SKIV2L-201ENST00000375394 TSHZ2Q9NRE2 1034 aa15.54■□□□□ 0.08
SKIV2L-201ENST00000375394 RUSC2Q8N2Y8 1516 aa15.53■□□□□ 0.08
SKIV2L-201ENST00000375394 GOLGA3Q08378 1498 aa15.52■□□□□ 0.08
SKIV2L-201ENST00000375394 ANP32CO43423 234 aa15.52■□□□□ 0.08
SKIV2L-201ENST00000375394 SIN3AQ96ST3 1273 aa15.5■□□□□ 0.07
SKIV2L-201ENST00000375394 WIZO95785 1651 aa15.48■□□□□ 0.07
SKIV2L-201ENST00000375394 KANK4Q5T7N3 995 aaPredicted RBP15.46■□□□□ 0.07
SKIV2L-201ENST00000375394 ZNF326Q5BKZ1 582 aaKnown RBP15.45■□□□□ 0.06
SKIV2L-201ENST00000375394 HNRNPUQ00839 825 aaKnown RBP eCLIP15.44■□□□□ 0.06
SKIV2L-201ENST00000375394 FAM9BQ8IZU0 186 aa15.38■□□□□ 0.05
SKIV2L-201ENST00000375394 CEP164Q9UPV0 1460 aa15.36■□□□□ 0.05
SKIV2L-201ENST00000375394 CHIC2Q9UKJ5 165 aa15.36■□□□□ 0.05
SKIV2L-201ENST00000375394 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
SKIV2L-201ENST00000375394 CDK11AQ9UQ88 783 aaPredicted RBP15.35■□□□□ 0.05
SKIV2L-201ENST00000375394 NACADO15069 1562 aa15.35■□□□□ 0.05
SKIV2L-201ENST00000375394 VPS8Q8N3P4 1428 aa15.33■□□□□ 0.04
SKIV2L-201ENST00000375394 NBR1Q14596 966 aa15.32■□□□□ 0.04
SKIV2L-201ENST00000375394 SALL2Q9Y467 1007 aaPredicted RBP15.31■□□□□ 0.04
SKIV2L-201ENST00000375394 RBM19Q9Y4C8 960 aaKnown RBP15.29■□□□□ 0.04
SKIV2L-201ENST00000375394 NPM2Q86SE8 214 aaKnown RBP15.27■□□□□ 0.03
SKIV2L-201ENST00000375394 MYT1LQ9UL68 1186 aa15.26■□□□□ 0.03
SKIV2L-201ENST00000375394 DHX57Q6P158 1386 aaKnown RBP15.26■□□□□ 0.03
SKIV2L-201ENST00000375394 TONSLQ96HA7 1378 aa15.25■□□□□ 0.03
SKIV2L-201ENST00000375394 TOP2AP11388 1531 aaKnown RBP15.23■□□□□ 0.03
SKIV2L-201ENST00000375394 RRP7BPQ9NSQ0 103 aa15.2■□□□□ 0.02
SKIV2L-201ENST00000375394 RAPGEF2Q9Y4G8 1499 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms