RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 TIAM1Q13009 1591 aa14.99□□□□□ -0.01
CNOT3-202ENST00000358389 HSP90AA2PQ14568 343 aaPredicted RBP14.95□□□□□ -0.02
CNOT3-202ENST00000358389 MPHOSPH9Q99550 1183 aa14.95□□□□□ -0.02
CNOT3-202ENST00000358389 DCAF11Q8TEB1 546 aa14.95□□□□□ -0.02
CNOT3-202ENST00000358389 ZMYND15Q9H091 742 aa14.95□□□□□ -0.02
CNOT3-202ENST00000358389 CRBNQ96SW2 442 aa14.95□□□□□ -0.02
CNOT3-202ENST00000358389 SLKQ9H2G2 1235 aaPredicted RBP14.95□□□□□ -0.02
CNOT3-202ENST00000358389 FMN1Q68DA7 1419 aa14.95□□□□□ -0.02
CNOT3-202ENST00000358389 NBPF8Q3BBV2 869 aa14.94□□□□□ -0.02
CNOT3-202ENST00000358389 PNNQ9H307 717 aaKnown RBP14.94□□□□□ -0.02
CNOT3-202ENST00000358389 HSP90AA1P07900 732 aaKnown RBP14.93□□□□□ -0.02
CNOT3-202ENST00000358389 CARMIL1Q5VZK9 1371 aa14.93□□□□□ -0.02
CNOT3-202ENST00000358389 FHOD3Q2V2M9 1422 aa14.93□□□□□ -0.02
CNOT3-202ENST00000358389 RNF123Q5XPI4 1314 aa14.93□□□□□ -0.02
CNOT3-202ENST00000358389 PNISRQ8TF01 805 aaKnown RBP14.93□□□□□ -0.02
CNOT3-202ENST00000358389 CDCA7LQ96GN5 454 aa14.91□□□□□ -0.02
CNOT3-202ENST00000358389 KDM2AQ9Y2K7 1162 aa14.91□□□□□ -0.02
CNOT3-202ENST00000358389 GZF1Q9H116 711 aaPredicted RBP14.9□□□□□ -0.02
CNOT3-202ENST00000358389 NPM1P06748 294 aaKnown RBP eCLIP14.9□□□□□ -0.02
CNOT3-202ENST00000358389 POGKQ9P215 609 aa14.9□□□□□ -0.02
CNOT3-202ENST00000358389 FGD6Q6ZV73 1430 aa14.9□□□□□ -0.02
CNOT3-202ENST00000358389 CANXP27824 592 aaKnown RBP14.89□□□□□ -0.03
CNOT3-202ENST00000358389 TOP2BQ02880 1626 aa14.89□□□□□ -0.03
CNOT3-202ENST00000358389 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.037e-9■■■■■ 27
CNOT3-202ENST00000358389 NCOA1Q15788 1441 aa14.89□□□□□ -0.03
CNOT3-202ENST00000358389 CHMP7Q8WUX9 453 aaPredicted RBP14.88□□□□□ -0.03
CNOT3-202ENST00000358389 L1TD1Q5T7N2 865 aaKnown RBP14.87□□□□□ -0.03
CNOT3-202ENST00000358389 FAM161AQ3B820 660 aa14.87□□□□□ -0.03
CNOT3-202ENST00000358389 RRAGDQ9NQL2 400 aaPredicted RBP14.86□□□□□ -0.03
CNOT3-202ENST00000358389 HFM1A2PYH4 1435 aa14.86□□□□□ -0.03
CNOT3-202ENST00000358389 NCOA2Q15596 1464 aa14.86□□□□□ -0.03
CNOT3-202ENST00000358389 SPRYD3Q8NCJ5 442 aa14.85□□□□□ -0.03
CNOT3-202ENST00000358389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.85□□□□□ -0.033e-9■■■□□ 16.4
CNOT3-202ENST00000358389 PTPRKQ15262 1439 aa14.85□□□□□ -0.03
CNOT3-202ENST00000358389 NAIPQ13075 1403 aa14.84□□□□□ -0.03
CNOT3-202ENST00000358389 IGF1RP08069 1367 aa14.84□□□□□ -0.03
CNOT3-202ENST00000358389 BECN1Q14457 450 aa14.83□□□□□ -0.04
CNOT3-202ENST00000358389 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
CNOT3-202ENST00000358389 CARD11Q9BXL7 1154 aa14.81□□□□□ -0.04
CNOT3-202ENST00000358389 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
CNOT3-202ENST00000358389 C20orf194Q5TEA3 1177 aa14.8□□□□□ -0.04
CNOT3-202ENST00000358389 GOLGA6L3A6NEY3 463 aa14.8□□□□□ -0.04
CNOT3-202ENST00000358389 NCAPD3P42695 1498 aa14.79□□□□□ -0.04
CNOT3-202ENST00000358389 CC2D1BQ5T0F9 858 aaKnown RBP14.79□□□□□ -0.04
CNOT3-202ENST00000358389 MAP3K1Q13233 1512 aa14.79□□□□□ -0.04
CNOT3-202ENST00000358389 CHGAP10645 457 aaKnown RBP14.79□□□□□ -0.04
CNOT3-202ENST00000358389 PDE3BQ13370 1112 aa14.78□□□□□ -0.04
CNOT3-202ENST00000358389 USP47Q96K76 1375 aa14.78□□□□□ -0.04
CNOT3-202ENST00000358389 MYBBP1AQ9BQG0 1328 aaKnown RBP14.78□□□□□ -0.04
CNOT3-202ENST00000358389 CENPQQ7L2Z9 268 aaPredicted RBP14.77□□□□□ -0.04
CNOT3-202ENST00000358389 PODXL2Q9NZ53 605 aa14.77□□□□□ -0.05
CNOT3-202ENST00000358389 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.76□□□□□ -0.05
CNOT3-202ENST00000358389 TRIM44Q96DX7 344 aaPredicted RBP14.76□□□□□ -0.05
CNOT3-202ENST00000358389 SENP3Q9H4L4 574 aaPredicted RBP14.76□□□□□ -0.05
CNOT3-202ENST00000358389 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.76□□□□□ -0.05
CNOT3-202ENST00000358389 KTN1Q86UP2 1357 aaKnown RBP14.75□□□□□ -0.05
CNOT3-202ENST00000358389 RALBP1Q15311 655 aa14.75□□□□□ -0.05
CNOT3-202ENST00000358389 UPF2Q9HAU5 1272 aaKnown RBP14.75□□□□□ -0.05
CNOT3-202ENST00000358389 SLC24A1O60721 1099 aa14.74□□□□□ -0.05
CNOT3-202ENST00000358389 CUX1P39880 1505 aa14.74□□□□□ -0.05
CNOT3-202ENST00000358389 PCF11O94913 1555 aaKnown RBP14.74□□□□□ -0.05
CNOT3-202ENST00000358389 PTPN23Q9H3S7 1636 aa14.74□□□□□ -0.05
CNOT3-202ENST00000358389 KIF15Q9NS87 1388 aa14.74□□□□□ -0.05
CNOT3-202ENST00000358389 NLRP13Q86W25 1043 aa14.74□□□□□ -0.05
CNOT3-202ENST00000358389 RRP9O43818 475 aaKnown RBP14.73□□□□□ -0.05
CNOT3-202ENST00000358389 ESF1Q9H501 851 aaKnown RBP14.73□□□□□ -0.05
CNOT3-202ENST00000358389 DHX29Q7Z478 1369 aaKnown RBP14.73□□□□□ -0.05
CNOT3-202ENST00000358389 ST20-MTHFSA0A0A6YYL1 179 aa14.72□□□□□ -0.05
CNOT3-202ENST00000358389 RGL3Q3MIN7 710 aa14.72□□□□□ -0.05
CNOT3-202ENST00000358389 C8orf34Q49A92 452 aa14.72□□□□□ -0.05
CNOT3-202ENST00000358389 PANK2Q9BZ23 570 aa14.72□□□□□ -0.05
CNOT3-202ENST00000358389 ARID3AQ99856 593 aa14.7□□□□□ -0.06
CNOT3-202ENST00000358389 MYOM3Q5VTT5 1437 aa14.7□□□□□ -0.06
CNOT3-202ENST00000358389 TSPY4P0CV99 314 aa14.69□□□□□ -0.06
CNOT3-202ENST00000358389 TSPY10P0CW01 314 aa14.69□□□□□ -0.06
CNOT3-202ENST00000358389 MYH16Q9H6N6 1097 aa14.69□□□□□ -0.06
CNOT3-202ENST00000358389 BRD4O60885 1362 aaPredicted RBP14.69□□□□□ -0.06
CNOT3-202ENST00000358389 A0A0U1RQG5 324 aaPredicted RBP14.68□□□□□ -0.06
CNOT3-202ENST00000358389 KDM5BQ9UGL1 1544 aa14.68□□□□□ -0.06
CNOT3-202ENST00000358389 XRCC6P12956 609 aaKnown RBP eCLIP14.68□□□□□ -0.06
CNOT3-202ENST00000358389 CASKIN1Q8WXD9 1431 aa14.68□□□□□ -0.06
CNOT3-202ENST00000358389 PLEKHG5O94827 1062 aa14.68□□□□□ -0.06
CNOT3-202ENST00000358389 WDR43Q15061 677 aaKnown RBP eCLIP14.68□□□□□ -0.06
CNOT3-202ENST00000358389 PLPPR3Q6T4P5 718 aa14.66□□□□□ -0.06
CNOT3-202ENST00000358389 CFTRP13569 1480 aa14.66□□□□□ -0.06
CNOT3-202ENST00000358389 FYCO1Q9BQS8 1478 aa14.65□□□□□ -0.06
CNOT3-202ENST00000358389 BIVM-ERCC5R4GMW8 1640 aa14.65□□□□□ -0.06
CNOT3-202ENST00000358389 ROCK2O75116 1388 aaKnown RBP14.65□□□□□ -0.06
CNOT3-202ENST00000358389 PKD2Q13563 968 aa14.64□□□□□ -0.07
CNOT3-202ENST00000358389 CLCN1P35523 988 aa14.64□□□□□ -0.07
CNOT3-202ENST00000358389 ANKRD30BQ9BXX2 1392 aa14.62□□□□□ -0.07
CNOT3-202ENST00000358389 ERCC6Q03468 1493 aa14.61□□□□□ -0.07
CNOT3-202ENST00000358389 ESPNB1AK53 854 aa14.61□□□□□ -0.07
CNOT3-202ENST00000358389 SEC24BO95487 1268 aa14.6□□□□□ -0.07
CNOT3-202ENST00000358389 SPATA31E1Q6ZUB1 1445 aa14.6□□□□□ -0.07
CNOT3-202ENST00000358389 FGD5Q6ZNL6 1462 aa14.6□□□□□ -0.07
CNOT3-202ENST00000358389 STAG3Q9UJ98 1225 aa14.6□□□□□ -0.07
CNOT3-202ENST00000358389 LRPPRCP42704 1394 aaKnown RBP14.59□□□□□ -0.07
CNOT3-202ENST00000358389 TRAK2O60296 914 aa14.59□□□□□ -0.07
CNOT3-202ENST00000358389 ANP32BQ92688 251 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms