RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 CUL7Q14999 1698 aa21.69■■□□□ 1.06
MBD1-204ENST00000347968 EXOC6Q8TAG9 804 aa21.66■■□□□ 1.06
MBD1-204ENST00000347968 GLIPR1L2Q4G1C9 344 aa21.65■■□□□ 1.06
MBD1-204ENST00000347968 BACH2Q9BYV9 841 aa21.64■■□□□ 1.05
MBD1-204ENST00000347968 FRAT2O75474 233 aaPredicted RBP21.64■■□□□ 1.05
MBD1-204ENST00000347968 NUDCQ9Y266 331 aa21.64■■□□□ 1.05
MBD1-204ENST00000347968 FAM43AQ8N2R8 423 aa21.62■■□□□ 1.05
MBD1-204ENST00000347968 PHLDB1Q86UU1 1377 aa21.62■■□□□ 1.05
MBD1-204ENST00000347968 POLR3GLQ9BT43 218 aa21.61■■□□□ 1.05
MBD1-204ENST00000347968 RRAGDQ9NQL2 400 aaPredicted RBP21.61■■□□□ 1.05
MBD1-204ENST00000347968 WDR62O43379 1518 aa21.59■■□□□ 1.05
MBD1-204ENST00000347968 ARID4BQ4LE39 1312 aaPredicted RBP21.58■■□□□ 1.05
MBD1-204ENST00000347968 NAP1L5Q96NT1 182 aaPredicted RBP21.57■■□□□ 1.04
MBD1-204ENST00000347968 DAXXQ9UER7 740 aaPredicted RBP21.57■■□□□ 1.04
MBD1-204ENST00000347968 CTTNBP2Q8WZ74 1663 aa21.57■■□□□ 1.04
MBD1-204ENST00000347968 TCERG1O14776 1098 aaKnown RBP21.56■■□□□ 1.04
MBD1-204ENST00000347968 PBRM1Q86U86 1689 aa21.56■■□□□ 1.04
MBD1-204ENST00000347968 IFT140Q96RY7 1462 aa21.55■■□□□ 1.04
MBD1-204ENST00000347968 PCF11O94913 1555 aaKnown RBP21.55■■□□□ 1.04
MBD1-204ENST00000347968 FBLN2P98095 1184 aa21.54■■□□□ 1.04
MBD1-204ENST00000347968 SMG6Q86US8 1419 aaKnown RBP21.54■■□□□ 1.04
MBD1-204ENST00000347968 CNTLNQ9NXG0 1405 aa21.53■■□□□ 1.04
MBD1-204ENST00000347968 GRIN2BQ13224 1484 aa21.52■■□□□ 1.04
MBD1-204ENST00000347968 EIF4G2P78344 907 aaKnown RBP eCLIP21.52■■□□□ 1.03
MBD1-204ENST00000347968 FHAD1B1AJZ9 1412 aa21.51■■□□□ 1.03
MBD1-204ENST00000347968 ARID3CA6NKF2 412 aa21.51■■□□□ 1.03
MBD1-204ENST00000347968 HSP90AA2PQ14568 343 aaPredicted RBP21.5■■□□□ 1.03
MBD1-204ENST00000347968 RNF123Q5XPI4 1314 aa21.49■■□□□ 1.03
MBD1-204ENST00000347968 THOC2Q8NI27 1593 aaKnown RBP21.49■■□□□ 1.03
MBD1-204ENST00000347968 A0A0U1RQG5 324 aaPredicted RBP21.49■■□□□ 1.03
MBD1-204ENST00000347968 TIAM1Q13009 1591 aa21.49■■□□□ 1.03
MBD1-204ENST00000347968 SNAPC4Q5SXM2 1469 aa21.48■■□□□ 1.03
MBD1-204ENST00000347968 ADAMTS12P58397 1594 aa21.47■■□□□ 1.03
MBD1-204ENST00000347968 POGKQ9P215 609 aa21.47■■□□□ 1.03
MBD1-204ENST00000347968 DDRGK1Q96HY6 314 aa21.45■■□□□ 1.02
MBD1-204ENST00000347968 EFCAB5A4FU69 1503 aa21.45■■□□□ 1.02
MBD1-204ENST00000347968 EIF4G3O43432 1585 aaKnown RBP21.45■■□□□ 1.02
MBD1-204ENST00000347968 PLIN1O60240 522 aa21.44■■□□□ 1.02
MBD1-204ENST00000347968 LRRC9Q6ZRR7 1453 aa21.44■■□□□ 1.02
MBD1-204ENST00000347968 RRP1P56182 461 aaKnown RBP21.42■■□□□ 1.02
MBD1-204ENST00000347968 CCDC7Q96M83 1385 aa21.4■■□□□ 1.02
MBD1-204ENST00000347968 CHMP7Q8WUX9 453 aaPredicted RBP21.4■■□□□ 1.02
MBD1-204ENST00000347968 CASKIN1Q8WXD9 1431 aa21.39■■□□□ 1.02
MBD1-204ENST00000347968 FMN1Q68DA7 1419 aa21.38■■□□□ 1.01
MBD1-204ENST00000347968 HSP90AA1P07900 732 aaKnown RBP21.38■■□□□ 1.01
MBD1-204ENST00000347968 SAMD9Q5K651 1589 aa21.37■■□□□ 1.01
MBD1-204ENST00000347968 FYCO1Q9BQS8 1478 aa21.37■■□□□ 1.01
MBD1-204ENST00000347968 FOXD1Q16676 465 aa21.37■■□□□ 1.01
MBD1-204ENST00000347968 MS4A1P11836 297 aa21.35■■□□□ 1.01
MBD1-204ENST00000347968 IQGAP2Q13576 1575 aa21.35■■□□□ 1.01
MBD1-204ENST00000347968 PNNQ9H307 717 aaKnown RBP21.35■■□□□ 1.01
MBD1-204ENST00000347968 KIF7Q2M1P5 1343 aa21.34■■□□□ 1.01
MBD1-204ENST00000347968 NCOA2Q15596 1464 aa21.33■■□□□ 1
MBD1-204ENST00000347968 RCAN3Q9UKA8 241 aa21.32■■□□□ 1
MBD1-204ENST00000347968 MAP3K1Q13233 1512 aa21.31■■□□□ 1
MBD1-204ENST00000347968 GRIN2AQ12879 1464 aa21.31■■□□□ 1
MBD1-204ENST00000347968 CCDC18Q5T9S5 1454 aa21.31■■□□□ 1
MBD1-204ENST00000347968 CFAP43Q8NDM7 1665 aa21.31■■□□□ 1
MBD1-204ENST00000347968 MTUS2Q5JR59 1369 aa21.3■■□□□ 1
MBD1-204ENST00000347968 KDM5BQ9UGL1 1544 aa21.3■■□□□ 1
MBD1-204ENST00000347968 L3MBTL2Q969R5 705 aa21.3■■□□□ 1
MBD1-204ENST00000347968 TMC1Q8TDI8 760 aa21.29■■□□□ 1
MBD1-204ENST00000347968 SLKQ9H2G2 1235 aaPredicted RBP21.27■■□□□ 1
MBD1-204ENST00000347968 PANK2Q9BZ23 570 aa21.27■■□□□ 1
MBD1-204ENST00000347968 LRRIQ1Q96JM4 1722 aa21.26■□□□□ 0.99
MBD1-204ENST00000347968 RRP7BPQ9NSQ0 103 aa21.26■□□□□ 0.99
MBD1-204ENST00000347968 CHIC2Q9UKJ5 165 aa21.26■□□□□ 0.99
MBD1-204ENST00000347968 RRP9O43818 475 aaKnown RBP21.26■□□□□ 0.99
MBD1-204ENST00000347968 CRBNQ96SW2 442 aa21.26■□□□□ 0.99
MBD1-204ENST00000347968 GZF1Q9H116 711 aaPredicted RBP21.26■□□□□ 0.99
MBD1-204ENST00000347968 RGS3P49796 1198 aa21.25■□□□□ 0.99
MBD1-204ENST00000347968 NCOA1Q15788 1441 aa21.25■□□□□ 0.99
MBD1-204ENST00000347968 CDCA7LQ96GN5 454 aa21.25■□□□□ 0.99
MBD1-204ENST00000347968 NBPF8Q3BBV2 869 aa21.23■□□□□ 0.99
MBD1-204ENST00000347968 KIAA0586Q9BVV6 1533 aa21.22■□□□□ 0.99
MBD1-204ENST00000347968 PNISRQ8TF01 805 aaKnown RBP21.22■□□□□ 0.99
MBD1-204ENST00000347968 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
MBD1-204ENST00000347968 SYNJ2O15056 1496 aa21.21■□□□□ 0.99
MBD1-204ENST00000347968 PTPRKQ15262 1439 aa21.21■□□□□ 0.99
MBD1-204ENST00000347968 RBM10P98175 930 aaKnown RBP21.2■□□□□ 0.99
MBD1-204ENST00000347968 UACAQ9BZF9 1416 aa21.2■□□□□ 0.98
MBD1-204ENST00000347968 CEP170Q5SW79 1584 aa21.2■□□□□ 0.98
MBD1-204ENST00000347968 CDK13Q14004 1512 aaKnown RBP21.19■□□□□ 0.98
MBD1-204ENST00000347968 ZNF326Q5BKZ1 582 aaKnown RBP21.19■□□□□ 0.98
MBD1-204ENST00000347968 C20orf194Q5TEA3 1177 aa21.19■□□□□ 0.98
MBD1-204ENST00000347968 DISP1Q96F81 1524 aa21.18■□□□□ 0.98
MBD1-204ENST00000347968 MAGI3Q5TCQ9 1506 aa21.17■□□□□ 0.98
MBD1-204ENST00000347968 UGGT2Q9NYU1 1516 aa21.17■□□□□ 0.98
MBD1-204ENST00000347968 XRCC6P12956 609 aaKnown RBP eCLIP21.16■□□□□ 0.982e-6■■■■■ 29.9
MBD1-204ENST00000347968 JPH4Q96JJ6 628 aa21.15■□□□□ 0.98
MBD1-204ENST00000347968 C8orf34Q49A92 452 aa21.15■□□□□ 0.98
MBD1-204ENST00000347968 SPRYD3Q8NCJ5 442 aa21.13■□□□□ 0.97
MBD1-204ENST00000347968 KIAA0556O60303 1618 aa21.13■□□□□ 0.97
MBD1-204ENST00000347968 ARID3AQ99856 593 aa21.13■□□□□ 0.97
MBD1-204ENST00000347968 EPRSP07814 1512 aaKnown RBP21.12■□□□□ 0.97
MBD1-204ENST00000347968 FGD6Q6ZV73 1430 aa21.11■□□□□ 0.97
MBD1-204ENST00000347968 CLCN1P35523 988 aa21.1■□□□□ 0.97
MBD1-204ENST00000347968 FAM161AQ3B820 660 aa21.1■□□□□ 0.97
MBD1-204ENST00000347968 DHX29Q7Z478 1369 aaKnown RBP21.1■□□□□ 0.97
MBD1-204ENST00000347968 L1TD1Q5T7N2 865 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms