RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 TMF1P82094 1093 aa20.07■□□□□ 0.8
SRPK1-201ENST00000346162 AMER1Q5JTC6 1135 aaPredicted RBP20.06■□□□□ 0.8
SRPK1-201ENST00000346162 IL27Q8NEV9 243 aa20.06■□□□□ 0.8
SRPK1-201ENST00000346162 NUP155O75694 1391 aa20.05■□□□□ 0.8
SRPK1-201ENST00000346162 DNTTIP2Q5QJE6 756 aaKnown RBP20.03■□□□□ 0.8
SRPK1-201ENST00000346162 ANKRD30AQ9BXX3 1397 aa20.03■□□□□ 0.8
SRPK1-201ENST00000346162 PODXL2Q9NZ53 605 aa20.03■□□□□ 0.8
SRPK1-201ENST00000346162 NEUROD2Q15784 382 aa20.02■□□□□ 0.79
SRPK1-201ENST00000346162 GSE1Q14687 1217 aa20■□□□□ 0.79
SRPK1-201ENST00000346162 NCAPD3P42695 1498 aa19.99■□□□□ 0.79
SRPK1-201ENST00000346162 FGD5Q6ZNL6 1462 aa19.98■□□□□ 0.79
SRPK1-201ENST00000346162 CCDC18Q5T9S5 1454 aa19.97■□□□□ 0.79
SRPK1-201ENST00000346162 GOLGA6L22H0YM25 854 aa19.96■□□□□ 0.79
SRPK1-201ENST00000346162 JPH4Q96JJ6 628 aa19.96■□□□□ 0.79
SRPK1-201ENST00000346162 KIF21BO75037 1637 aa19.96■□□□□ 0.79
SRPK1-201ENST00000346162 KANK1Q14678 1352 aa19.96■□□□□ 0.79
SRPK1-201ENST00000346162 ARID3AQ99856 593 aa19.95■□□□□ 0.78
SRPK1-201ENST00000346162 RGS3P49796 1198 aa19.95■□□□□ 0.78
SRPK1-201ENST00000346162 PTMAP06454 111 aaKnown RBP19.95■□□□□ 0.78
SRPK1-201ENST00000346162 A0A0U1RQG5 324 aaPredicted RBP19.94■□□□□ 0.78
SRPK1-201ENST00000346162 EFCAB2Q5VUJ9 269 aa19.94■□□□□ 0.78
SRPK1-201ENST00000346162 MYH16Q9H6N6 1097 aa19.93■□□□□ 0.78
SRPK1-201ENST00000346162 HNRNPMP52272 730 aaKnown RBP eCLIP19.93■□□□□ 0.781e-6■■■■■ 27.7
SRPK1-201ENST00000346162 POGKQ9P215 609 aa19.92■□□□□ 0.78
SRPK1-201ENST00000346162 MSNP26038 577 aaKnown RBP19.91■□□□□ 0.78
SRPK1-201ENST00000346162 NUDCQ9Y266 331 aa19.91■□□□□ 0.78
SRPK1-201ENST00000346162 ROCK2O75116 1388 aaKnown RBP19.9■□□□□ 0.78
SRPK1-201ENST00000346162 RAD54L2Q9Y4B4 1467 aa19.9■□□□□ 0.78
SRPK1-201ENST00000346162 TCERG1O14776 1098 aaKnown RBP19.89■□□□□ 0.78
SRPK1-201ENST00000346162 UBE2Q2Q8WVN8 375 aa19.89■□□□□ 0.78
SRPK1-201ENST00000346162 KTN1Q86UP2 1357 aaKnown RBP19.89■□□□□ 0.77
SRPK1-201ENST00000346162 MAPK8IP3Q9UPT6 1336 aa19.88■□□□□ 0.77
SRPK1-201ENST00000346162 FTSJ3Q8IY81 847 aaKnown RBP19.87■□□□□ 0.77
SRPK1-201ENST00000346162 FRAT1Q92837 279 aaPredicted RBP19.87■□□□□ 0.77
SRPK1-201ENST00000346162 RSPH4AQ5TD94 716 aa19.86■□□□□ 0.77
SRPK1-201ENST00000346162 RALBP1Q15311 655 aa19.86■□□□□ 0.77
SRPK1-201ENST00000346162 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
SRPK1-201ENST00000346162 GGT6Q6P531 493 aa19.86■□□□□ 0.77
SRPK1-201ENST00000346162 GZF1Q9H116 711 aaPredicted RBP19.85■□□□□ 0.77
SRPK1-201ENST00000346162 PHLDB1Q86UU1 1377 aa19.85■□□□□ 0.77
SRPK1-201ENST00000346162 GAPVD1Q14C86 1478 aa19.84■□□□□ 0.77
SRPK1-201ENST00000346162 U2SURPO15042 1029 aaKnown RBP19.83■□□□□ 0.76
SRPK1-201ENST00000346162 C14orf37Q86TY3 774 aa19.82■□□□□ 0.76
SRPK1-201ENST00000346162 ARAP1Q96P48 1450 aa19.82■□□□□ 0.76
SRPK1-201ENST00000346162 GOLGA6L3A6NEY3 463 aa19.81■□□□□ 0.76
SRPK1-201ENST00000346162 BRPF3Q9ULD4 1205 aa19.81■□□□□ 0.76
SRPK1-201ENST00000346162 MORC1Q86VD1 984 aa19.8■□□□□ 0.76
SRPK1-201ENST00000346162 FGD6Q6ZV73 1430 aa19.79■□□□□ 0.76
SRPK1-201ENST00000346162 LRRC9Q6ZRR7 1453 aa19.79■□□□□ 0.76
SRPK1-201ENST00000346162 CFTRP13569 1480 aa19.79■□□□□ 0.76
SRPK1-201ENST00000346162 MSH5O43196 834 aa19.79■□□□□ 0.76
SRPK1-201ENST00000346162 SLKQ9H2G2 1235 aaPredicted RBP19.79■□□□□ 0.76
SRPK1-201ENST00000346162 ERICH3Q5RHP9 1530 aa19.78■□□□□ 0.76
SRPK1-201ENST00000346162 SAFB2Q14151 953 aaKnown RBP eCLIP19.77■□□□□ 0.76
SRPK1-201ENST00000346162 KIF3BO15066 747 aa19.77■□□□□ 0.76
SRPK1-201ENST00000346162 RCAN3Q9UKA8 241 aa19.77■□□□□ 0.76
SRPK1-201ENST00000346162 PLEKHG5O94827 1062 aa19.77■□□□□ 0.75
SRPK1-201ENST00000346162 SRPK2P78362 688 aaKnown RBP19.76■□□□□ 0.75
SRPK1-201ENST00000346162 ZBTB7CA1YPR0 619 aa19.76■□□□□ 0.75
SRPK1-201ENST00000346162 ST20-MTHFSA0A0A6YYL1 179 aa19.75■□□□□ 0.75
SRPK1-201ENST00000346162 PRXQ9BXM0 1461 aa19.75■□□□□ 0.75
SRPK1-201ENST00000346162 NLRP13Q86W25 1043 aa19.75■□□□□ 0.75
SRPK1-201ENST00000346162 PRKRIP1Q9H875 184 aaPredicted RBP19.75■□□□□ 0.75
SRPK1-201ENST00000346162 SPAG9O60271 1321 aaKnown RBP19.74■□□□□ 0.75
SRPK1-201ENST00000346162 MYOM3Q5VTT5 1437 aa19.74■□□□□ 0.75
SRPK1-201ENST00000346162 PAK3O75914 559 aaPredicted RBP19.74■□□□□ 0.75
SRPK1-201ENST00000346162 SPRYD3Q8NCJ5 442 aa19.73■□□□□ 0.75
SRPK1-201ENST00000346162 MS4A1P11836 297 aa19.71■□□□□ 0.75
SRPK1-201ENST00000346162 SLC4A3P48751 1232 aa19.71■□□□□ 0.75
SRPK1-201ENST00000346162 RRBP1Q9P2E9 1410 aaKnown RBP19.7■□□□□ 0.74
SRPK1-201ENST00000346162 CASKIN1Q8WXD9 1431 aa19.7■□□□□ 0.74
SRPK1-201ENST00000346162 STK26Q9P289 416 aa19.7■□□□□ 0.74
SRPK1-201ENST00000346162 PTPRGP23470 1445 aa19.7■□□□□ 0.74
SRPK1-201ENST00000346162 MLECQ14165 292 aa19.7■□□□□ 0.74
SRPK1-201ENST00000346162 ZNF644Q9H582 1327 aaPredicted RBP19.69■□□□□ 0.74
SRPK1-201ENST00000346162 UACAQ9BZF9 1416 aa19.69■□□□□ 0.74
SRPK1-201ENST00000346162 PDE4AP27815 886 aa19.69■□□□□ 0.74
SRPK1-201ENST00000346162 CCDC144AA2RUR9 1427 aa19.67■□□□□ 0.74
SRPK1-201ENST00000346162 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
SRPK1-201ENST00000346162 USP47Q96K76 1375 aa19.65■□□□□ 0.74
SRPK1-201ENST00000346162 AQRO60306 1485 aaKnown RBP eCLIP19.65■□□□□ 0.749e-8■■■■□ 21
SRPK1-201ENST00000346162 KIF15Q9NS87 1388 aa19.64■□□□□ 0.73
SRPK1-201ENST00000346162 CUX1P39880 1505 aa19.63■□□□□ 0.73
SRPK1-201ENST00000346162 CHMP4BQ9H444 224 aaKnown RBP19.63■□□□□ 0.73
SRPK1-201ENST00000346162 EIF3AQ14152 1382 aaKnown RBP19.63■□□□□ 0.73
SRPK1-201ENST00000346162 NCOA2Q15596 1464 aa19.63■□□□□ 0.73
SRPK1-201ENST00000346162 PDE3BQ13370 1112 aa19.63■□□□□ 0.73
SRPK1-201ENST00000346162 PLCB2Q00722 1185 aa19.62■□□□□ 0.73
SRPK1-201ENST00000346162 U2AF1L5P0DN76 240 aaPredicted RBP19.62■□□□□ 0.73
SRPK1-201ENST00000346162 U2AF1Q01081 240 aaKnown RBP eCLIP19.62■□□□□ 0.73
SRPK1-201ENST00000346162 CHAF1AQ13111 956 aaPredicted RBP19.62■□□□□ 0.73
SRPK1-201ENST00000346162 MYBBP1AQ9BQG0 1328 aaKnown RBP19.62■□□□□ 0.73
SRPK1-201ENST00000346162 HSP90AB1P08238 724 aaKnown RBP19.62■□□□□ 0.73
SRPK1-201ENST00000346162 HDGFP51858 240 aaKnown RBP19.61■□□□□ 0.73
SRPK1-201ENST00000346162 NFKBIBQ15653 356 aa19.6■□□□□ 0.73
SRPK1-201ENST00000346162 HSCBQ8IWL3 235 aa19.59■□□□□ 0.73
SRPK1-201ENST00000346162 PANK3Q9H999 370 aa19.59■□□□□ 0.73
SRPK1-201ENST00000346162 GOLGA2Q08379 1002 aa19.59■□□□□ 0.73
SRPK1-201ENST00000346162 HDGFL2Q7Z4V5 671 aaPredicted RBP19.59■□□□□ 0.73
SRPK1-201ENST00000346162 FYCO1Q9BQS8 1478 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms