RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 KIF3BO15066 747 aa20.89■□□□□ 0.94
CCNY-202ENST00000339497 SRPK2P78362 688 aaKnown RBP20.89■□□□□ 0.93
CCNY-202ENST00000339497 STK26Q9P289 416 aa20.88■□□□□ 0.93
CCNY-202ENST00000339497 KTN1Q86UP2 1357 aaKnown RBP20.87■□□□□ 0.93
CCNY-202ENST00000339497 ANP32EQ9BTT0 268 aa20.87■□□□□ 0.93
CCNY-202ENST00000339497 MORC1Q86VD1 984 aa20.86■□□□□ 0.93
CCNY-202ENST00000339497 GAPVD1Q14C86 1478 aa20.86■□□□□ 0.93
CCNY-202ENST00000339497 ANP32BQ92688 251 aaKnown RBP20.86■□□□□ 0.93
CCNY-202ENST00000339497 PHLDB1Q86UU1 1377 aa20.85■□□□□ 0.93
CCNY-202ENST00000339497 DDRGK1Q96HY6 314 aa20.85■□□□□ 0.93
CCNY-202ENST00000339497 SYNJ1O43426 1573 aa20.83■□□□□ 0.92
CCNY-202ENST00000339497 SPAG9O60271 1321 aaKnown RBP20.81■□□□□ 0.92
CCNY-202ENST00000339497 ST20-MTHFSA0A0A6YYL1 179 aa20.81■□□□□ 0.92
CCNY-202ENST00000339497 RSPH4AQ5TD94 716 aa20.81■□□□□ 0.92
CCNY-202ENST00000339497 ZNF644Q9H582 1327 aaPredicted RBP20.81■□□□□ 0.92
CCNY-202ENST00000339497 RBM19Q9Y4C8 960 aaKnown RBP20.81■□□□□ 0.92
CCNY-202ENST00000339497 BECN1Q14457 450 aa20.81■□□□□ 0.92
CCNY-202ENST00000339497 RALBP1Q15311 655 aa20.8■□□□□ 0.92
CCNY-202ENST00000339497 ARAP1Q96P48 1450 aa20.79■□□□□ 0.92
CCNY-202ENST00000339497 EIF5BO60841 1220 aaKnown RBP20.79■□□□□ 0.92
CCNY-202ENST00000339497 SOX12O15370 315 aa20.79■□□□□ 0.92
CCNY-202ENST00000339497 A0A0G2JS52 829 aa20.77■□□□□ 0.92
CCNY-202ENST00000339497 LMOD2Q6P5Q4 547 aa20.77■□□□□ 0.92
CCNY-202ENST00000339497 RCAN3Q9UKA8 241 aa20.76■□□□□ 0.91
CCNY-202ENST00000339497 FGD6Q6ZV73 1430 aa20.75■□□□□ 0.91
CCNY-202ENST00000339497 PTPRGP23470 1445 aa20.75■□□□□ 0.91
CCNY-202ENST00000339497 AQRO60306 1485 aaKnown RBP eCLIP20.74■□□□□ 0.918e-7■■■■■ 33.9
CCNY-202ENST00000339497 NUTM2DQ5VT03 806 aaPredicted RBP20.74■□□□□ 0.91
CCNY-202ENST00000339497 CFTRP13569 1480 aa20.73■□□□□ 0.91
CCNY-202ENST00000339497 LRRC9Q6ZRR7 1453 aa20.73■□□□□ 0.91
CCNY-202ENST00000339497 PRKRIP1Q9H875 184 aaPredicted RBP20.72■□□□□ 0.91
CCNY-202ENST00000339497 NLRP13Q86W25 1043 aa20.72■□□□□ 0.91
CCNY-202ENST00000339497 NOP58Q9Y2X3 529 aaKnown RBP20.72■□□□□ 0.91
CCNY-202ENST00000339497 U2AF1L5P0DN76 240 aaPredicted RBP20.7■□□□□ 0.9
CCNY-202ENST00000339497 U2AF1Q01081 240 aaKnown RBP eCLIP20.7■□□□□ 0.9
CCNY-202ENST00000339497 MYOM3Q5VTT5 1437 aa20.69■□□□□ 0.9
CCNY-202ENST00000339497 TSHZ2Q9NRE2 1034 aa20.68■□□□□ 0.9
CCNY-202ENST00000339497 CCDC144AA2RUR9 1427 aa20.67■□□□□ 0.9
CCNY-202ENST00000339497 WASHC2CQ9Y4E1 1318 aa20.66■□□□□ 0.9
CCNY-202ENST00000339497 ERICH6BQ5W0A0 696 aa20.66■□□□□ 0.9
CCNY-202ENST00000339497 PRXQ9BXM0 1461 aa20.66■□□□□ 0.9
CCNY-202ENST00000339497 NESP48681 1621 aa20.66■□□□□ 0.9
CCNY-202ENST00000339497 PNNQ9H307 717 aaKnown RBP20.64■□□□□ 0.9
CCNY-202ENST00000339497 USP47Q96K76 1375 aa20.64■□□□□ 0.89
CCNY-202ENST00000339497 CCDC146Q8IYE0 955 aa20.64■□□□□ 0.89
CCNY-202ENST00000339497 PANK3Q9H999 370 aa20.64■□□□□ 0.89
CCNY-202ENST00000339497 TRAK1Q9UPV9 953 aa20.64■□□□□ 0.89
CCNY-202ENST00000339497 MS4A1P11836 297 aa20.63■□□□□ 0.89
CCNY-202ENST00000339497 TRHP20396 242 aaPredicted RBP20.63■□□□□ 0.89
CCNY-202ENST00000339497 HDGFP51858 240 aaKnown RBP20.63■□□□□ 0.89
CCNY-202ENST00000339497 ERICH3Q5RHP9 1530 aa20.63■□□□□ 0.89
CCNY-202ENST00000339497 HDGFL2Q7Z4V5 671 aaPredicted RBP20.63■□□□□ 0.89
CCNY-202ENST00000339497 CASKIN1Q8WXD9 1431 aa20.62■□□□□ 0.89
CCNY-202ENST00000339497 HAP1P54257 671 aaPredicted RBP20.62■□□□□ 0.89
CCNY-202ENST00000339497 UACAQ9BZF9 1416 aa20.6■□□□□ 0.89
CCNY-202ENST00000339497 NCOA2Q15596 1464 aa20.6■□□□□ 0.89
CCNY-202ENST00000339497 CUX1P39880 1505 aa20.59■□□□□ 0.89
CCNY-202ENST00000339497 EIF3AQ14152 1382 aaKnown RBP20.58■□□□□ 0.89
CCNY-202ENST00000339497 KIF15Q9NS87 1388 aa20.58■□□□□ 0.88
CCNY-202ENST00000339497 GOLGA2Q08379 1002 aa20.58■□□□□ 0.88
CCNY-202ENST00000339497 RRBP1Q9P2E9 1410 aaKnown RBP20.57■□□□□ 0.88
CCNY-202ENST00000339497 MYBBP1AQ9BQG0 1328 aaKnown RBP20.57■□□□□ 0.88
CCNY-202ENST00000339497 TOP2BQ02880 1626 aa20.55■□□□□ 0.88
CCNY-202ENST00000339497 CHMP4BQ9H444 224 aaKnown RBP20.54■□□□□ 0.88
CCNY-202ENST00000339497 NCLP19338 710 aaKnown RBP20.54■□□□□ 0.88
CCNY-202ENST00000339497 GOLGA6L22H0YM25 854 aa20.53■□□□□ 0.88
CCNY-202ENST00000339497 CASC1Q6TDU7 716 aa20.53■□□□□ 0.88
CCNY-202ENST00000339497 CLUAP1Q96AJ1 413 aa20.52■□□□□ 0.88
CCNY-202ENST00000339497 PDE3BQ13370 1112 aa20.51■□□□□ 0.87
CCNY-202ENST00000339497 KIF7Q2M1P5 1343 aa20.51■□□□□ 0.87
CCNY-202ENST00000339497 TERF2IPQ9NYB0 399 aa20.49■□□□□ 0.87
CCNY-202ENST00000339497 RRP7AQ9Y3A4 280 aaKnown RBP20.49■□□□□ 0.87
CCNY-202ENST00000339497 POLA1P09884 1462 aaPredicted RBP20.49■□□□□ 0.87
CCNY-202ENST00000339497 TPRNQ4KMQ1 711 aa20.49■□□□□ 0.87
CCNY-202ENST00000339497 FYCO1Q9BQS8 1478 aa20.48■□□□□ 0.87
CCNY-202ENST00000339497 ANKRD50Q9ULJ7 1429 aa20.48■□□□□ 0.87
CCNY-202ENST00000339497 ZBED9Q6R2W3 1325 aa20.48■□□□□ 0.87
CCNY-202ENST00000339497 CCDC7Q96M83 1385 aa20.48■□□□□ 0.87
CCNY-202ENST00000339497 TCERG1O14776 1098 aaKnown RBP20.48■□□□□ 0.87
CCNY-202ENST00000339497 TOPBP1Q92547 1522 aa20.47■□□□□ 0.87
CCNY-202ENST00000339497 GRIN2BQ13224 1484 aa20.47■□□□□ 0.87
CCNY-202ENST00000339497 WASHC2AQ641Q2 1341 aa20.47■□□□□ 0.87
CCNY-202ENST00000339497 NUTM2FA1L443 756 aa20.47■□□□□ 0.87
CCNY-202ENST00000339497 PLIN1O60240 522 aa20.47■□□□□ 0.87
CCNY-202ENST00000339497 APBB1O00213 710 aa20.47■□□□□ 0.87
CCNY-202ENST00000339497 ITPRIPQ8IWB1 547 aa20.46■□□□□ 0.87
CCNY-202ENST00000339497 SPRYD3Q8NCJ5 442 aa20.46■□□□□ 0.87
CCNY-202ENST00000339497 IPO8O15397 1037 aaKnown RBP20.46■□□□□ 0.87
CCNY-202ENST00000339497 HMGXB3Q12766 1538 aa20.46■□□□□ 0.87
CCNY-202ENST00000339497 RTF1Q92541 710 aaKnown RBP20.46■□□□□ 0.87
CCNY-202ENST00000339497 PAK3O75914 559 aaPredicted RBP20.45■□□□□ 0.86
CCNY-202ENST00000339497 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
CCNY-202ENST00000339497 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.45■□□□□ 0.861e-6■■□□□ 13.6
CCNY-202ENST00000339497 OS9Q13438 667 aaPredicted RBP20.44■□□□□ 0.86
CCNY-202ENST00000339497 HSP90AB1P08238 724 aaKnown RBP20.44■□□□□ 0.86
CCNY-202ENST00000339497 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
CCNY-202ENST00000339497 SMC4Q9NTJ3 1288 aa20.43■□□□□ 0.86
CCNY-202ENST00000339497 TRIM44Q96DX7 344 aaPredicted RBP20.42■□□□□ 0.86
CCNY-202ENST00000339497 CENPJQ9HC77 1338 aaPredicted RBP20.41■□□□□ 0.86
CCNY-202ENST00000339497 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms